RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 BTNL9Q6UXG8 535 aa7.46□□□□□ -1.21
SMG1-201ENST00000330588 DPP9Q86TI2 863 aa7.46□□□□□ -1.21
SMG1-201ENST00000330588 NPLOC4Q8TAT6 608 aa7.46□□□□□ -1.21
SMG1-201ENST00000330588 DCAF4Q8WV16 495 aa7.46□□□□□ -1.21
SMG1-201ENST00000330588 FAM227BQ96M60 508 aa7.46□□□□□ -1.21
SMG1-201ENST00000330588 PPP1R12CQ9BZL4 782 aa7.46□□□□□ -1.21
SMG1-201ENST00000330588 SLC38A10Q9HBR0 1119 aa7.46□□□□□ -1.21
SMG1-201ENST00000330588 CTNNA3Q9UI47 895 aa7.46□□□□□ -1.21
SMG1-201ENST00000330588 SYNGAP1Q96PV0 1343 aa7.46□□□□□ -1.21
SMG1-201ENST00000330588 KIAA0100Q14667 2235 aaKnown RBP7.46□□□□□ -1.22
SMG1-201ENST00000330588 PLXNA1Q9UIW2 1896 aa7.46□□□□□ -1.22
SMG1-201ENST00000330588 DNAJC25-GNG10A0A024R161 153 aa7.46□□□□□ -1.22
SMG1-201ENST00000330588 A0A1B0GTH6 734 aa7.46□□□□□ -1.22
SMG1-201ENST00000330588 PEX10O60683 326 aa7.46□□□□□ -1.22
SMG1-201ENST00000330588 PRDM1O75626 825 aa7.46□□□□□ -1.22
SMG1-201ENST00000330588 TOP1P11387 765 aaKnown RBP7.46□□□□□ -1.22
SMG1-201ENST00000330588 COL6A1P12109 1028 aa7.46□□□□□ -1.22
SMG1-201ENST00000330588 KCTD2Q14681 263 aa7.46□□□□□ -1.22
SMG1-201ENST00000330588 LBRQ14739 615 aaKnown RBP7.46□□□□□ -1.22
SMG1-201ENST00000330588 CCL14Q16627 93 aa7.46□□□□□ -1.22
SMG1-201ENST00000330588 ZNF792Q3KQV3 632 aa7.46□□□□□ -1.22
SMG1-201ENST00000330588 TTC22Q5TAA0 569 aa7.46□□□□□ -1.22
SMG1-201ENST00000330588 VPS53Q5VIR6 699 aa7.46□□□□□ -1.22
SMG1-201ENST00000330588 WDR78Q5VTH9 848 aa7.46□□□□□ -1.22
SMG1-201ENST00000330588 SLFN13Q68D06 897 aa7.46□□□□□ -1.22
SMG1-201ENST00000330588 MAMDC4Q6UXC1 1216 aa7.46□□□□□ -1.22
SMG1-201ENST00000330588 CCDC129Q6ZRS4 1044 aa7.46□□□□□ -1.22
SMG1-201ENST00000330588 ZNF589Q86UQ0 364 aaPredicted RBP7.46□□□□□ -1.22
SMG1-201ENST00000330588 NCAPG2Q86XI2 1143 aa7.46□□□□□ -1.22
SMG1-201ENST00000330588 DGKHQ86XP1 1220 aa7.46□□□□□ -1.22
SMG1-201ENST00000330588 PHTF2Q8N3S3 785 aa7.46□□□□□ -1.22
SMG1-201ENST00000330588 RUFY2Q8WXA3 655 aa7.46□□□□□ -1.22
SMG1-201ENST00000330588 ANKS1AQ92625 1134 aa7.46□□□□□ -1.22
SMG1-201ENST00000330588 RILPL2Q969X0 211 aa7.46□□□□□ -1.22
SMG1-201ENST00000330588 MAML3Q96JK9 1138 aa7.46□□□□□ -1.22
SMG1-201ENST00000330588 MMP19Q99542 508 aa7.46□□□□□ -1.22
SMG1-201ENST00000330588 OXCT2Q9BYC2 517 aaPredicted RBP7.46□□□□□ -1.22
SMG1-201ENST00000330588 IL17RBQ9NRM6 502 aa7.46□□□□□ -1.22
SMG1-201ENST00000330588 DIAPH3Q9NSV4 1193 aa7.46□□□□□ -1.22
SMG1-201ENST00000330588 FBXO28Q9NVF7 368 aa7.46□□□□□ -1.22
SMG1-201ENST00000330588 DDX20Q9UHI6 824 aaKnown RBP7.46□□□□□ -1.22
SMG1-201ENST00000330588 ZNFX1Q9P2E3 1918 aaKnown RBP7.45□□□□□ -1.22
SMG1-201ENST00000330588 PALM3A6NDB9 673 aaPredicted RBP7.45□□□□□ -1.22
SMG1-201ENST00000330588 SEPT4O43236 478 aa7.45□□□□□ -1.22
SMG1-201ENST00000330588 COBLO75128 1261 aa7.45□□□□□ -1.22
SMG1-201ENST00000330588 SLC1A4P43007 532 aa7.45□□□□□ -1.22
SMG1-201ENST00000330588 PLS1Q14651 629 aa7.45□□□□□ -1.22
SMG1-201ENST00000330588 FAM47AQ5JRC9 791 aa7.45□□□□□ -1.22
SMG1-201ENST00000330588 B4GALNT3Q6L9W6 998 aa7.45□□□□□ -1.22
SMG1-201ENST00000330588 MFSD6Q6ZSS7 791 aa7.45□□□□□ -1.22
SMG1-201ENST00000330588 ESR2Q92731 530 aa7.45□□□□□ -1.22
SMG1-201ENST00000330588 ZSCAN10Q96SZ4 725 aaPredicted RBP7.45□□□□□ -1.22
SMG1-201ENST00000330588 C11orf49Q9H6J7 331 aa7.45□□□□□ -1.22
SMG1-201ENST00000330588 CNNM2Q9H8M5 875 aa7.45□□□□□ -1.22
SMG1-201ENST00000330588 FLRT1Q9NZU1 646 aa7.45□□□□□ -1.22
SMG1-201ENST00000330588 PFASO15067 1338 aa7.45□□□□□ -1.22
SMG1-201ENST00000330588 ALPK3Q96L96 1907 aa7.44□□□□□ -1.22
SMG1-201ENST00000330588 DNM1LO00429 736 aa7.44□□□□□ -1.22
SMG1-201ENST00000330588 ZNF213O14771 459 aa7.44□□□□□ -1.22
SMG1-201ENST00000330588 MSTNO14793 375 aa7.44□□□□□ -1.22
SMG1-201ENST00000330588 RANBP6O60518 1105 aaKnown RBP7.44□□□□□ -1.22
SMG1-201ENST00000330588 MYCP01106 439 aaPredicted RBP7.44□□□□□ -1.22
SMG1-201ENST00000330588 NEFLP07196 543 aa7.44□□□□□ -1.22
SMG1-201ENST00000330588 SNHG28P0DPA3 235 aa7.44□□□□□ -1.22
SMG1-201ENST00000330588 CCND3P30281 292 aaPredicted RBP7.44□□□□□ -1.22
SMG1-201ENST00000330588 IMMTQ16891 758 aaKnown RBP7.44□□□□□ -1.22
SMG1-201ENST00000330588 GPATCH4Q5T3I0 446 aaKnown RBP7.44□□□□□ -1.22
SMG1-201ENST00000330588 C1orf53Q5VUE5 145 aa7.44□□□□□ -1.22
SMG1-201ENST00000330588 SNRNP48Q6IEG0 339 aaKnown RBP7.44□□□□□ -1.22
SMG1-201ENST00000330588 ARRDC4Q8NCT1 418 aa7.44□□□□□ -1.22
SMG1-201ENST00000330588 SPOCK3Q9BQ16 436 aa7.44□□□□□ -1.22
SMG1-201ENST00000330588 TINF2Q9BSI4 451 aa7.44□□□□□ -1.22
SMG1-201ENST00000330588 STX8Q9UNK0 236 aa7.44□□□□□ -1.22
SMG1-201ENST00000330588 CTDP1Q9Y5B0 961 aaPredicted RBP7.44□□□□□ -1.22
SMG1-201ENST00000330588 MAFBQ9Y5Q3 323 aaPredicted RBP7.44□□□□□ -1.22
SMG1-201ENST00000330588 TACC3Q9Y6A5 838 aa7.44□□□□□ -1.22
SMG1-201ENST00000330588 TMEM232C9JQI7 657 aa7.43□□□□□ -1.22
SMG1-201ENST00000330588 PROCP04070 461 aa7.43□□□□□ -1.22
SMG1-201ENST00000330588 GSPT1P15170 499 aaKnown RBP7.43□□□□□ -1.22
SMG1-201ENST00000330588 BMP8BP34820 402 aa7.43□□□□□ -1.22
SMG1-201ENST00000330588 NKX3-2P78367 333 aa7.43□□□□□ -1.22
SMG1-201ENST00000330588 C4orf17Q53FE4 359 aa7.43□□□□□ -1.22
SMG1-201ENST00000330588 CWC27Q6UX04 472 aaKnown RBP7.43□□□□□ -1.22
SMG1-201ENST00000330588 IQCA1Q86XH1 822 aa7.43□□□□□ -1.22
SMG1-201ENST00000330588 LRRC47Q8N1G4 583 aaKnown RBP7.43□□□□□ -1.22
SMG1-201ENST00000330588 WDR19Q8NEZ3 1342 aa7.43□□□□□ -1.22
SMG1-201ENST00000330588 PAWRQ96IZ0 340 aaKnown RBP7.43□□□□□ -1.22
SMG1-201ENST00000330588 NUP88Q99567 741 aaPredicted RBP7.43□□□□□ -1.22
SMG1-201ENST00000330588 MTA3Q9BTC8 594 aa7.43□□□□□ -1.22
SMG1-201ENST00000330588 KRT23Q9C075 422 aa7.43□□□□□ -1.22
SMG1-201ENST00000330588 RANBP17Q9H2T7 1088 aaKnown RBP7.43□□□□□ -1.22
SMG1-201ENST00000330588 PRO3102Q9H379 93 aa7.43□□□□□ -1.22
SMG1-201ENST00000330588 ACAD9Q9H845 621 aa7.43□□□□□ -1.22
SMG1-201ENST00000330588 GPAMQ9HCL2 828 aa7.43□□□□□ -1.22
SMG1-201ENST00000330588 TFIP11Q9UBB9 837 aaKnown RBP7.43□□□□□ -1.22
SMG1-201ENST00000330588 ZNF536O15090 1300 aa7.42□□□□□ -1.22
SMG1-201ENST00000330588 ICAM1P05362 532 aa7.42□□□□□ -1.22
SMG1-201ENST00000330588 CENPBP07199 599 aaPredicted RBP7.42□□□□□ -1.22
SMG1-201ENST00000330588 AKR1A1P14550 325 aa7.42□□□□□ -1.22
SMG1-201ENST00000330588 CST5P28325 142 aaPredicted RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms