RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 AS3MTQ9HBK9 375 aa18.95■□□□□ 0.62
DDX41-201ENST00000330503 SLC39A2Q9NP94 309 aa18.95■□□□□ 0.62
DDX41-201ENST00000330503 COL20A1Q9P218 1284 aa18.95■□□□□ 0.62
DDX41-201ENST00000330503 ZHX2Q9Y6X8 837 aa18.95■□□□□ 0.62
DDX41-201ENST00000330503 PLA2G4BP0C869 781 aa18.95■□□□□ 0.62
DDX41-201ENST00000330503 CCNE1P24864 410 aa18.95■□□□□ 0.62
DDX41-201ENST00000330503 GHRHRQ02643 423 aa18.95■□□□□ 0.62
DDX41-201ENST00000330503 DLK2Q6UY11 383 aa18.95■□□□□ 0.62
DDX41-201ENST00000330503 P2RX5Q93086 422 aa18.95■□□□□ 0.62
DDX41-201ENST00000330503 ZFP91Q96JP5 570 aaPredicted RBP18.95■□□□□ 0.62
DDX41-201ENST00000330503 SYT17Q9BSW7 474 aa18.95■□□□□ 0.62
DDX41-201ENST00000330503 PHIPQ8WWQ0 1821 aa18.94■□□□□ 0.62
DDX41-201ENST00000330503 KCNJ18B7U540 433 aa18.94■□□□□ 0.62
DDX41-201ENST00000330503 EML1O00423 815 aa18.94■□□□□ 0.62
DDX41-201ENST00000330503 RPA1P27694 616 aa18.94■□□□□ 0.62
DDX41-201ENST00000330503 KCNJ12Q14500 433 aa18.94■□□□□ 0.62
DDX41-201ENST00000330503 MUM1L1Q5H9M0 696 aa18.94■□□□□ 0.62
DDX41-201ENST00000330503 ANKRD40Q6AI12 368 aa18.94■□□□□ 0.62
DDX41-201ENST00000330503 SLC30A10Q6XR72 485 aa18.94■□□□□ 0.62
DDX41-201ENST00000330503 SLC5A5Q92911 643 aa18.94■□□□□ 0.62
DDX41-201ENST00000330503 SRRTQ9BXP5 876 aaKnown RBP18.94■□□□□ 0.62
DDX41-201ENST00000330503 TMX1Q9H3N1 280 aa18.94■□□□□ 0.62
DDX41-201ENST00000330503 EHMT1Q9H9B1 1298 aa18.94■□□□□ 0.62
DDX41-201ENST00000330503 POTEFA5A3E0 1075 aa18.94■□□□□ 0.62
DDX41-201ENST00000330503 MEIS1O00470 390 aa18.94■□□□□ 0.62
DDX41-201ENST00000330503 POTEIP0CG38 1075 aa18.94■□□□□ 0.62
DDX41-201ENST00000330503 ALAS1P13196 640 aa18.94■□□□□ 0.62
DDX41-201ENST00000330503 YBX3P16989 372 aaKnown RBP eCLIP18.94■□□□□ 0.622e-6■□□□□ 9.5
DDX41-201ENST00000330503 PSMC6P62333 389 aa18.94■□□□□ 0.62
DDX41-201ENST00000330503 CEP55Q53EZ4 464 aa18.94■□□□□ 0.62
DDX41-201ENST00000330503 POTEGQ6S5H5 508 aa18.94■□□□□ 0.62
DDX41-201ENST00000330503 POTEEQ6S8J3 1075 aa18.94■□□□□ 0.62
DDX41-201ENST00000330503 WNK4Q96J92 1243 aa18.94■□□□□ 0.62
DDX41-201ENST00000330503 SEMA6BQ9H3T3 888 aa18.94■□□□□ 0.62
DDX41-201ENST00000330503 RNF181Q9P0P0 153 aa18.94■□□□□ 0.62
DDX41-201ENST00000330503 RPTORQ8N122 1335 aa18.93■□□□□ 0.62
DDX41-201ENST00000330503 USP2O75604 605 aaPredicted RBP18.93■□□□□ 0.62
DDX41-201ENST00000330503 PSMD10O75832 226 aa18.93■□□□□ 0.62
DDX41-201ENST00000330503 COPB1P53618 953 aaKnown RBP18.93■□□□□ 0.62
DDX41-201ENST00000330503 SPAG1Q07617 926 aa18.93■□□□□ 0.62
DDX41-201ENST00000330503 SUPT20HL1Q3ZLR7 823 aa18.93■□□□□ 0.62
DDX41-201ENST00000330503 ARSHQ5FYA8 562 aa18.93■□□□□ 0.62
DDX41-201ENST00000330503 OTOP1Q7RTM1 612 aa18.93■□□□□ 0.62
DDX41-201ENST00000330503 ERMNQ8TAM6 284 aa18.93■□□□□ 0.62
DDX41-201ENST00000330503 C12orf42Q96LP6 360 aa18.93■□□□□ 0.62
DDX41-201ENST00000330503 THAP9Q9H5L6 903 aa18.93■□□□□ 0.62
DDX41-201ENST00000330503 PITPNM2Q9BZ72 1349 aa18.93■□□□□ 0.62
DDX41-201ENST00000330503 NPHP3-ACAD11A0A0J9YXS1 232 aa18.92■□□□□ 0.62
DDX41-201ENST00000330503 VWA5AO00534 786 aa18.92■□□□□ 0.62
DDX41-201ENST00000330503 ZBED4O75132 1171 aa18.92■□□□□ 0.62
DDX41-201ENST00000330503 SSBP05455 408 aaKnown RBP eCLIP18.92■□□□□ 0.62
DDX41-201ENST00000330503 ARP10275 920 aa18.92■□□□□ 0.62
DDX41-201ENST00000330503 IDEP14735 1019 aa18.92■□□□□ 0.62
DDX41-201ENST00000330503 PPP1R2P41236 205 aa18.92■□□□□ 0.62
DDX41-201ENST00000330503 SLC12A3P55017 1021 aa18.92■□□□□ 0.62
DDX41-201ENST00000330503 FILIP1LQ4L180 1135 aa18.92■□□□□ 0.62
DDX41-201ENST00000330503 NOL9Q5SY16 702 aaKnown RBP18.92■□□□□ 0.62
DDX41-201ENST00000330503 HAUS3Q68CZ6 603 aa18.92■□□□□ 0.62
DDX41-201ENST00000330503 ATG4CQ96DT6 458 aa18.92■□□□□ 0.62
DDX41-201ENST00000330503 TRIM47Q96LD4 638 aa18.92■□□□□ 0.62
DDX41-201ENST00000330503 VPS16Q9H269 839 aa18.92■□□□□ 0.62
DDX41-201ENST00000330503 STK24Q9Y6E0 443 aa18.92■□□□□ 0.62
DDX41-201ENST00000330503 USP27XA6NNY8 438 aa18.92■□□□□ 0.62
DDX41-201ENST00000330503 CYP11B2P19099 503 aa18.92■□□□□ 0.62
DDX41-201ENST00000330503 HMGCS2P54868 508 aa18.92■□□□□ 0.62
DDX41-201ENST00000330503 PSMD2Q13200 908 aa18.92■□□□□ 0.62
DDX41-201ENST00000330503 CENPPQ6IPU0 288 aa18.92■□□□□ 0.62
DDX41-201ENST00000330503 MCF2L2Q86YR7 1114 aa18.92■□□□□ 0.62
DDX41-201ENST00000330503 TC2NQ8N9U0 490 aa18.92■□□□□ 0.62
DDX41-201ENST00000330503 EIF2AK1Q9BQI3 630 aaKnown RBP18.92■□□□□ 0.62
DDX41-201ENST00000330503 POLR3CQ9BUI4 534 aaPredicted RBP18.92■□□□□ 0.62
DDX41-201ENST00000330503 ADARB2Q9NS39 739 aaKnown RBP18.92■□□□□ 0.62
DDX41-201ENST00000330503 KCND1Q9NSA2 647 aa18.92■□□□□ 0.62
DDX41-201ENST00000330503 TAB2Q9NYJ8 693 aa18.92■□□□□ 0.62
DDX41-201ENST00000330503 PARP14Q460N5 1801 aa18.92■□□□□ 0.62
DDX41-201ENST00000330503 RLFQ13129 1914 aa18.91■□□□□ 0.62
DDX41-201ENST00000330503 C19orf81C9J6K1 198 aa18.91■□□□□ 0.62
DDX41-201ENST00000330503 COASYQ13057 564 aa18.91■□□□□ 0.62
DDX41-201ENST00000330503 PRKG1Q13976 671 aa18.91■□□□□ 0.62
DDX41-201ENST00000330503 GPBP1Q86WP2 473 aa18.91■□□□□ 0.62
DDX41-201ENST00000330503 GLIS3Q8NEA6 775 aa18.91■□□□□ 0.62
DDX41-201ENST00000330503 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.91■□□□□ 0.62
DDX41-201ENST00000330503 IL31RAQ8NI17 732 aa18.91■□□□□ 0.62
DDX41-201ENST00000330503 SYTL5Q8TDW5 730 aaPredicted RBP18.91■□□□□ 0.62
DDX41-201ENST00000330503 HOMER2Q9NSB8 354 aa18.91■□□□□ 0.62
DDX41-201ENST00000330503 PANK4Q9NVE7 773 aa18.91■□□□□ 0.62
DDX41-201ENST00000330503 R3HCC1Q9Y3T6 440 aaKnown RBP18.91■□□□□ 0.62
DDX41-201ENST00000330503 AFG3L2Q9Y4W6 797 aa18.91■□□□□ 0.62
DDX41-201ENST00000330503 N4BP3O15049 544 aa18.91■□□□□ 0.62
DDX41-201ENST00000330503 PPP2R5CQ13362 524 aa18.91■□□□□ 0.62
DDX41-201ENST00000330503 LRCH2Q5VUJ6 765 aa18.91■□□□□ 0.62
DDX41-201ENST00000330503 TMEM139Q8IV31 216 aa18.91■□□□□ 0.62
DDX41-201ENST00000330503 GUF1Q8N442 669 aaKnown RBP18.91■□□□□ 0.62
DDX41-201ENST00000330503 REPS2Q8NFH8 660 aa18.91■□□□□ 0.62
DDX41-201ENST00000330503 NOC3LQ8WTT2 800 aaKnown RBP18.91■□□□□ 0.62
DDX41-201ENST00000330503 HSD17B14Q9BPX1 270 aa18.91■□□□□ 0.62
DDX41-201ENST00000330503 MXRA8Q9BRK3 442 aa18.91■□□□□ 0.62
DDX41-201ENST00000330503 BMP2KQ9NSY1 1161 aaPredicted RBP18.91■□□□□ 0.62
DDX41-201ENST00000330503 RGL1Q9NZL6 768 aa18.91■□□□□ 0.62
DDX41-201ENST00000330503 ADAMTS5Q9UNA0 930 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms