RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 PDE4DQ08499 809 aa17.56■□□□□ 0.4
CTHRC1-201ENST00000330295 ADGRD2Q7Z7M1 963 aa17.56■□□□□ 0.4
CTHRC1-201ENST00000330295 CEP95Q96GE4 821 aa17.56■□□□□ 0.4
CTHRC1-201ENST00000330295 DLL3Q9NYJ7 618 aa17.56■□□□□ 0.4
CTHRC1-201ENST00000330295 CCPG1Q9ULG6 757 aa17.56■□□□□ 0.4
CTHRC1-201ENST00000330295 GOLIM4O00461 696 aa17.55■□□□□ 0.4
CTHRC1-201ENST00000330295 ARIH2O95376 493 aa17.55■□□□□ 0.4
CTHRC1-201ENST00000330295 TTLL1O95922 423 aa17.55■□□□□ 0.4
CTHRC1-201ENST00000330295 CASTP20810 708 aaKnown RBP17.55■□□□□ 0.4
CTHRC1-201ENST00000330295 SLFNL1Q499Z3 407 aa17.55■□□□□ 0.4
CTHRC1-201ENST00000330295 STK11IPQ8N1F8 1099 aa17.55■□□□□ 0.4
CTHRC1-201ENST00000330295 KREMEN2Q8NCW0 462 aa17.55■□□□□ 0.4
CTHRC1-201ENST00000330295 SUSD6Q92537 303 aa17.55■□□□□ 0.4
CTHRC1-201ENST00000330295 SEPT8Q92599 483 aa17.55■□□□□ 0.4
CTHRC1-201ENST00000330295 ARHGAP45Q92619 1136 aa17.55■□□□□ 0.4
CTHRC1-201ENST00000330295 CLP1Q92989 425 aaKnown RBP17.55■□□□□ 0.4
CTHRC1-201ENST00000330295 MTMR4Q9NYA4 1195 aa17.55■□□□□ 0.4
CTHRC1-201ENST00000330295 ARPP21Q9UBL0 812 aaPredicted RBP17.55■□□□□ 0.4
CTHRC1-201ENST00000330295 NOP58Q9Y2X3 529 aaKnown RBP17.55■□□□□ 0.4
CTHRC1-201ENST00000330295 ZNF200P98182 395 aaPredicted RBP17.54■□□□□ 0.4
CTHRC1-201ENST00000330295 UBALD2Q8IYN6 164 aa17.54■□□□□ 0.4
CTHRC1-201ENST00000330295 KCNG4Q8TDN1 519 aa17.54■□□□□ 0.4
CTHRC1-201ENST00000330295 ALG1Q9BT22 464 aa17.54■□□□□ 0.4
CTHRC1-201ENST00000330295 SLC4A4Q9Y6R1 1079 aa17.54■□□□□ 0.4
CTHRC1-201ENST00000330295 ADGRA3Q8IWK6 1321 aa17.53■□□□□ 0.4
CTHRC1-201ENST00000330295 PLA2G6O60733 806 aa17.53■□□□□ 0.4
CTHRC1-201ENST00000330295 BCAR3O75815 825 aa17.53■□□□□ 0.4
CTHRC1-201ENST00000330295 LMNAP02545 664 aaKnown RBP17.53■□□□□ 0.4
CTHRC1-201ENST00000330295 EDNRBP24530 442 aa17.53■□□□□ 0.4
CTHRC1-201ENST00000330295 ADD2P35612 726 aa17.53■□□□□ 0.4
CTHRC1-201ENST00000330295 THPOP40225 353 aa17.53■□□□□ 0.4
CTHRC1-201ENST00000330295 NRIP1P48552 1158 aa17.53■□□□□ 0.4
CTHRC1-201ENST00000330295 PSEN2P49810 448 aa17.53■□□□□ 0.4
CTHRC1-201ENST00000330295 MTMR3Q13615 1198 aa17.53■□□□□ 0.4
CTHRC1-201ENST00000330295 COL9A2Q14055 689 aaPredicted RBP17.53■□□□□ 0.4
CTHRC1-201ENST00000330295 AACSQ86V21 672 aa17.53■□□□□ 0.4
CTHRC1-201ENST00000330295 MPHOSPH6Q99547 160 aaKnown RBP17.53■□□□□ 0.4
CTHRC1-201ENST00000330295 KATNAL1Q9BW62 490 aa17.53■□□□□ 0.4
CTHRC1-201ENST00000330295 PLVAPQ9BX97 442 aa17.53■□□□□ 0.4
CTHRC1-201ENST00000330295 PLAGL2Q9UPG8 496 aa17.53■□□□□ 0.4
CTHRC1-201ENST00000330295 USP24Q9UPU5 2620 aa17.52■□□□□ 0.4
CTHRC1-201ENST00000330295 PTPDC1A2A3K4 754 aa17.52■□□□□ 0.4
CTHRC1-201ENST00000330295 NFIBO00712 420 aa17.52■□□□□ 0.4
CTHRC1-201ENST00000330295 ICAM1P05362 532 aa17.52■□□□□ 0.4
CTHRC1-201ENST00000330295 SLC1A4P43007 532 aa17.52■□□□□ 0.4
CTHRC1-201ENST00000330295 CLCN5P51795 746 aa17.52■□□□□ 0.4
CTHRC1-201ENST00000330295 ATP8B2P98198 1209 aa17.52■□□□□ 0.4
CTHRC1-201ENST00000330295 SLC30A10Q6XR72 485 aa17.52■□□□□ 0.4
CTHRC1-201ENST00000330295 FRAT1Q92837 279 aaPredicted RBP17.52■□□□□ 0.4
CTHRC1-201ENST00000330295 GMCL1Q96IK5 515 aa17.52■□□□□ 0.4
CTHRC1-201ENST00000330295 DNAJC2Q99543 621 aaKnown RBP17.52■□□□□ 0.4
CTHRC1-201ENST00000330295 PRR12Q9ULL5 1215 aa17.52■□□□□ 0.4
CTHRC1-201ENST00000330295 SORCS3Q9UPU3 1222 aa17.52■□□□□ 0.4
CTHRC1-201ENST00000330295 MYO10Q9HD67 2058 aa17.52■□□□□ 0.39
CTHRC1-201ENST00000330295 BRD1O95696 1058 aa17.51■□□□□ 0.39
CTHRC1-201ENST00000330295 GH1P01241 217 aa17.51■□□□□ 0.39
CTHRC1-201ENST00000330295 DNAJB1P25685 340 aa17.51■□□□□ 0.39
CTHRC1-201ENST00000330295 ARHGAP1Q07960 439 aa17.51■□□□□ 0.39
CTHRC1-201ENST00000330295 MFSD10Q14728 455 aa17.51■□□□□ 0.39
CTHRC1-201ENST00000330295 DGKDQ16760 1214 aa17.51■□□□□ 0.39
CTHRC1-201ENST00000330295 KIAA0753Q2KHM9 967 aa17.51■□□□□ 0.39
CTHRC1-201ENST00000330295 OTOGLQ3ZCN5 2332 aa17.51■□□□□ 0.39
CTHRC1-201ENST00000330295 CCDC62Q6P9F0 684 aa17.51■□□□□ 0.39
CTHRC1-201ENST00000330295 RBM23Q86U06 439 aaKnown RBP17.51■□□□□ 0.39
CTHRC1-201ENST00000330295 CHMP4CQ96CF2 233 aa17.51■□□□□ 0.39
CTHRC1-201ENST00000330295 SEMA4AQ9H3S1 761 aa17.51■□□□□ 0.39
CTHRC1-201ENST00000330295 RC3H2Q9HBD1 1191 aaKnown RBP17.51■□□□□ 0.39
CTHRC1-201ENST00000330295 HAS3O00219 553 aa17.5■□□□□ 0.39
CTHRC1-201ENST00000330295 F2P00734 622 aa17.5■□□□□ 0.39
CTHRC1-201ENST00000330295 CALML3P27482 149 aa17.5■□□□□ 0.39
CTHRC1-201ENST00000330295 HIC1Q14526 733 aa17.5■□□□□ 0.39
CTHRC1-201ENST00000330295 SBK1Q52WX2 424 aa17.5■□□□□ 0.39
CTHRC1-201ENST00000330295 KCTD1Q719H9 257 aa17.5■□□□□ 0.39
CTHRC1-201ENST00000330295 CHST3Q7LGC8 479 aa17.5■□□□□ 0.39
CTHRC1-201ENST00000330295 SERINC5Q86VE9 423 aa17.5■□□□□ 0.39
CTHRC1-201ENST00000330295 DHX37Q8IY37 1157 aaKnown RBP17.5■□□□□ 0.39
CTHRC1-201ENST00000330295 P2RX5Q93086 422 aa17.5■□□□□ 0.39
CTHRC1-201ENST00000330295 OSBPL7Q9BZF2 842 aa17.5■□□□□ 0.39
CTHRC1-201ENST00000330295 MFSD1Q9H3U5 465 aa17.5■□□□□ 0.39
CTHRC1-201ENST00000330295 SP100P23497 879 aaPredicted RBP17.49■□□□□ 0.39
CTHRC1-201ENST00000330295 MCCP23508 829 aa17.49■□□□□ 0.39
CTHRC1-201ENST00000330295 ANGPT1Q15389 498 aa17.49■□□□□ 0.39
CTHRC1-201ENST00000330295 LY6KQ17RY6 165 aa17.49■□□□□ 0.39
CTHRC1-201ENST00000330295 ZNF444Q8N0Y2 327 aaPredicted RBP17.49■□□□□ 0.39
CTHRC1-201ENST00000330295 ITGB1P05556 798 aa17.48■□□□□ 0.39
CTHRC1-201ENST00000330295 ZNF286BP0CG31 522 aa17.48■□□□□ 0.39
CTHRC1-201ENST00000330295 BTG3Q14201 252 aaPredicted RBP17.48■□□□□ 0.39
CTHRC1-201ENST00000330295 ZKSCAN2Q63HK3 967 aa17.48■□□□□ 0.39
CTHRC1-201ENST00000330295 DNERQ8NFT8 737 aa17.48■□□□□ 0.39
CTHRC1-201ENST00000330295 SPPL3Q8TCT6 385 aa17.48■□□□□ 0.39
CTHRC1-201ENST00000330295 APBB2Q92870 758 aa17.48■□□□□ 0.39
CTHRC1-201ENST00000330295 HINFPQ9BQA5 517 aa17.48■□□□□ 0.39
CTHRC1-201ENST00000330295 MINDY4BA8MYZ0 360 aa17.47■□□□□ 0.39
CTHRC1-201ENST00000330295 B4DLN1 442 aa17.47■□□□□ 0.39
CTHRC1-201ENST00000330295 PRDM1O75626 825 aa17.47■□□□□ 0.39
CTHRC1-201ENST00000330295 CHGBP05060 677 aa17.47■□□□□ 0.39
CTHRC1-201ENST00000330295 MRPL12P52815 198 aaKnown RBP17.47■□□□□ 0.39
CTHRC1-201ENST00000330295 RBM10P98175 930 aaKnown RBP17.47■□□□□ 0.39
CTHRC1-201ENST00000330295 NAALADL2Q58DX5 795 aa17.47■□□□□ 0.39
CTHRC1-201ENST00000330295 RCSD1Q6JBY9 416 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms