RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 CEP170P1Q96L14 293 aa12.48□□□□□ -0.41
COL4A5-201ENST00000328300 RPS6KC1Q96S38 1066 aa12.48□□□□□ -0.41
COL4A5-201ENST00000328300 TIPINQ9BVW5 301 aa12.48□□□□□ -0.41
COL4A5-201ENST00000328300 OGFRQ9NZT2 677 aa12.48□□□□□ -0.41
COL4A5-201ENST00000328300 SEL1LQ9UBV2 794 aa12.48□□□□□ -0.41
COL4A5-201ENST00000328300 RHOXF2BP0C7M4 288 aa12.48□□□□□ -0.41
COL4A5-201ENST00000328300 PLA2G4BP0C869 781 aa12.48□□□□□ -0.41
COL4A5-201ENST00000328300 GNAT1P11488 350 aa12.48□□□□□ -0.41
COL4A5-201ENST00000328300 NSFP46459 744 aaKnown RBP12.48□□□□□ -0.41
COL4A5-201ENST00000328300 NCAPGQ9BPX3 1015 aa12.48□□□□□ -0.41
COL4A5-201ENST00000328300 RHOXF2Q9BQY4 288 aa12.48□□□□□ -0.41
COL4A5-201ENST00000328300 SAMD15Q9P1V8 674 aa12.48□□□□□ -0.41
COL4A5-201ENST00000328300 NEDD9Q14511 834 aa12.48□□□□□ -0.41
COL4A5-201ENST00000328300 FAM47CQ5HY64 1035 aa12.48□□□□□ -0.41
COL4A5-201ENST00000328300 FASTKD5Q7L8L6 764 aaKnown RBP12.48□□□□□ -0.41
COL4A5-201ENST00000328300 RBM46Q8TBY0 533 aaKnown RBP12.48□□□□□ -0.41
COL4A5-201ENST00000328300 NSUN4Q96CB9 384 aaKnown RBP12.48□□□□□ -0.41
COL4A5-201ENST00000328300 SMC6Q96SB8 1091 aa12.48□□□□□ -0.41
COL4A5-201ENST00000328300 SUGCTQ9HAC7 445 aa12.48□□□□□ -0.41
COL4A5-201ENST00000328300 PIK3CAP42336 1068 aa12.48□□□□□ -0.41
COL4A5-201ENST00000328300 C12orf60Q5U649 245 aa12.48□□□□□ -0.41
COL4A5-201ENST00000328300 MAP7D3Q8IWC1 876 aa12.48□□□□□ -0.41
COL4A5-201ENST00000328300 CCDC170Q8IYT3 715 aa12.48□□□□□ -0.41
COL4A5-201ENST00000328300 LPAR1Q92633 364 aa12.48□□□□□ -0.41
COL4A5-201ENST00000328300 BPIFA3Q9BQP9 254 aa12.48□□□□□ -0.41
COL4A5-201ENST00000328300 ARHGEF28Q8N1W1 1705 aaKnown RBP12.47□□□□□ -0.41
COL4A5-201ENST00000328300 HSPA6P17066 643 aa12.47□□□□□ -0.41
COL4A5-201ENST00000328300 SLC16A2P36021 539 aa12.47□□□□□ -0.41
COL4A5-201ENST00000328300 PRELPP51888 382 aa12.47□□□□□ -0.41
COL4A5-201ENST00000328300 TNFAIP2Q03169 654 aa12.47□□□□□ -0.41
COL4A5-201ENST00000328300 ENAHQ8N8S7 591 aaPredicted RBP12.47□□□□□ -0.41
COL4A5-201ENST00000328300 PRPF38AQ8NAV1 312 aaKnown RBP12.47□□□□□ -0.41
COL4A5-201ENST00000328300 COA7Q96BR5 231 aa12.47□□□□□ -0.41
COL4A5-201ENST00000328300 BARHL2Q9NY43 387 aa12.47□□□□□ -0.41
COL4A5-201ENST00000328300 SETD1BQ9UPS6 1966 aaKnown RBP12.47□□□□□ -0.41
COL4A5-201ENST00000328300 UNC13DQ70J99 1090 aa12.47□□□□□ -0.41
COL4A5-201ENST00000328300 CCDC63Q8NA47 563 aa12.47□□□□□ -0.41
COL4A5-201ENST00000328300 UBLCP1Q8WVY7 318 aaPredicted RBP12.47□□□□□ -0.41
COL4A5-201ENST00000328300 NLRC4Q9NPP4 1024 aa12.47□□□□□ -0.41
COL4A5-201ENST00000328300 NYAP2Q9P242 653 aa12.47□□□□□ -0.41
COL4A5-201ENST00000328300 KCNQ2O43526 872 aa12.47□□□□□ -0.41
COL4A5-201ENST00000328300 SETDB1Q15047 1291 aa12.47□□□□□ -0.41
COL4A5-201ENST00000328300 SLC10A5Q5PT55 438 aa12.47□□□□□ -0.41
COL4A5-201ENST00000328300 NACA2Q9H009 215 aa12.47□□□□□ -0.41
COL4A5-201ENST00000328300 SPON1Q9HCB6 807 aa12.47□□□□□ -0.41
COL4A5-201ENST00000328300 ZNF609O15014 1411 aa12.47□□□□□ -0.41
COL4A5-201ENST00000328300 PDS5AQ29RF7 1337 aaKnown RBP12.47□□□□□ -0.41
COL4A5-201ENST00000328300 C19orf81C9J6K1 198 aa12.47□□□□□ -0.41
COL4A5-201ENST00000328300 HSPA1LP34931 641 aa12.47□□□□□ -0.41
COL4A5-201ENST00000328300 METTL23Q86XA0 190 aa12.47□□□□□ -0.41
COL4A5-201ENST00000328300 TYW1Q9NV66 732 aaKnown RBP12.47□□□□□ -0.41
COL4A5-201ENST00000328300 MAN1B1Q9UKM7 699 aa12.47□□□□□ -0.41
COL4A5-201ENST00000328300 PCDHA6Q9UN73 950 aa12.47□□□□□ -0.41
COL4A5-201ENST00000328300 PCDHA8Q9Y5H6 950 aa12.47□□□□□ -0.41
COL4A5-201ENST00000328300 WDR64B1ANS9 1081 aa12.47□□□□□ -0.41
COL4A5-201ENST00000328300 LACTBP83111 547 aaPredicted RBP12.47□□□□□ -0.41
COL4A5-201ENST00000328300 APBA1Q02410 837 aa12.47□□□□□ -0.41
COL4A5-201ENST00000328300 ERCC6LQ2NKX8 1250 aa12.47□□□□□ -0.41
COL4A5-201ENST00000328300 TTC39CQ8N584 583 aa12.47□□□□□ -0.41
COL4A5-201ENST00000328300 LINC00116Q8NCU8 138 aa12.47□□□□□ -0.41
COL4A5-201ENST00000328300 CEP63Q96MT8 703 aa12.47□□□□□ -0.41
COL4A5-201ENST00000328300 SELENOSQ9BQE4 189 aa12.47□□□□□ -0.41
COL4A5-201ENST00000328300 EMILIN3Q9NT22 766 aa12.47□□□□□ -0.41
COL4A5-201ENST00000328300 GRIN3BO60391 1043 aa12.46□□□□□ -0.41
COL4A5-201ENST00000328300 CYP4A11Q02928 519 aa12.46□□□□□ -0.41
COL4A5-201ENST00000328300 KYAT1Q16773 422 aa12.46□□□□□ -0.41
COL4A5-201ENST00000328300 FNBP4Q8N3X1 1017 aaPredicted RBP12.46□□□□□ -0.41
COL4A5-201ENST00000328300 ASIC3Q9UHC3 531 aa12.46□□□□□ -0.41
COL4A5-201ENST00000328300 PPP2R2CQ9Y2T4 447 aa12.46□□□□□ -0.41
COL4A5-201ENST00000328300 ZNF500O60304 480 aaPredicted RBP12.46□□□□□ -0.41
COL4A5-201ENST00000328300 PAGE5Q96GU1 130 aa12.46□□□□□ -0.41
COL4A5-201ENST00000328300 POLR2FP61218 127 aaKnown RBP12.46□□□□□ -0.41
COL4A5-201ENST00000328300 ZNF710Q8N1W2 664 aa12.46□□□□□ -0.41
COL4A5-201ENST00000328300 SCP2P22307 547 aa12.46□□□□□ -0.42
COL4A5-201ENST00000328300 RICTORQ6R327 1708 aa12.46□□□□□ -0.42
COL4A5-201ENST00000328300 ITIH3Q06033 890 aa12.46□□□□□ -0.42
COL4A5-201ENST00000328300 MYRIPQ8NFW9 859 aa12.46□□□□□ -0.42
COL4A5-201ENST00000328300 TRIM7Q9C029 511 aa12.46□□□□□ -0.42
COL4A5-201ENST00000328300 PPFIA1Q13136 1202 aa12.45□□□□□ -0.42
COL4A5-201ENST00000328300 FBXO33Q7Z6M2 555 aa12.45□□□□□ -0.42
COL4A5-201ENST00000328300 LRRC8AQ8IWT6 810 aa12.45□□□□□ -0.42
COL4A5-201ENST00000328300 CCDC105Q8IYK2 499 aa12.45□□□□□ -0.42
COL4A5-201ENST00000328300 CCDC89Q8N998 374 aa12.45□□□□□ -0.42
COL4A5-201ENST00000328300 MED10Q9BTT4 135 aa12.45□□□□□ -0.42
COL4A5-201ENST00000328300 ATP6V0A4Q9HBG4 840 aa12.45□□□□□ -0.42
COL4A5-201ENST00000328300 EPN1Q9Y6I3 576 aaPredicted RBP12.45□□□□□ -0.42
COL4A5-201ENST00000328300 CYP2D7A0A087X1C5 515 aa12.45□□□□□ -0.42
COL4A5-201ENST00000328300 USP17L15C9J2P7 530 aa12.45□□□□□ -0.42
COL4A5-201ENST00000328300 USP17L13C9JLJ4 530 aa12.45□□□□□ -0.42
COL4A5-201ENST00000328300 USP17L11C9JVI0 530 aa12.45□□□□□ -0.42
COL4A5-201ENST00000328300 USP17L18D6R9N7 530 aa12.45□□□□□ -0.42
COL4A5-201ENST00000328300 USP17L22D6RA61 530 aa12.45□□□□□ -0.42
COL4A5-201ENST00000328300 USP17L17D6RBQ6 530 aa12.45□□□□□ -0.42
COL4A5-201ENST00000328300 USP17L19D6RCP7 530 aa12.45□□□□□ -0.42
COL4A5-201ENST00000328300 USP17L20D6RJB6 530 aa12.45□□□□□ -0.42
COL4A5-201ENST00000328300 USP17L24Q0WX57 530 aa12.45□□□□□ -0.42
COL4A5-201ENST00000328300 NR5A1Q13285 461 aa12.45□□□□□ -0.42
COL4A5-201ENST00000328300 LONRF2Q1L5Z9 754 aa12.45□□□□□ -0.42
COL4A5-201ENST00000328300 CCDC25Q86WR0 208 aa12.45□□□□□ -0.42
COL4A5-201ENST00000328300 TSC1Q92574 1164 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms