RNA–Protein interactions for RNA: ENST00000326197.11

SCMH1-201, Transcript of Scm polycomb group protein homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCMH1, Length 3,275 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-201ENST00000326197 WHAMMQ8TF30 809 aa11.15□□□□□ -0.62
SCMH1-201ENST00000326197 C7orf25Q9BPX7 421 aa11.15□□□□□ -0.62
SCMH1-201ENST00000326197 BTG4Q9NY30 223 aa11.15□□□□□ -0.62
SCMH1-201ENST00000326197 BAZ2AQ9UIF9 1905 aaKnown RBP11.15□□□□□ -0.62
SCMH1-201ENST00000326197 POTEMA6NI47 508 aa11.15□□□□□ -0.63
SCMH1-201ENST00000326197 MYMKA6NI61 221 aa11.15□□□□□ -0.63
SCMH1-201ENST00000326197 RAD51CO43502 376 aa11.15□□□□□ -0.63
SCMH1-201ENST00000326197 EPB41P11171 864 aaKnown RBP11.15□□□□□ -0.63
SCMH1-201ENST00000326197 HIBADHP31937 336 aaKnown RBP11.15□□□□□ -0.63
SCMH1-201ENST00000326197 UBE4AQ14139 1066 aa11.15□□□□□ -0.63
SCMH1-201ENST00000326197 FAM83BQ5T0W9 1011 aa11.15□□□□□ -0.63
SCMH1-201ENST00000326197 MYOCDQ8IZQ8 938 aa11.15□□□□□ -0.63
SCMH1-201ENST00000326197 REXO1Q8N1G1 1221 aaKnown RBP11.15□□□□□ -0.63
SCMH1-201ENST00000326197 RNF10Q8N5U6 811 aaKnown RBP11.15□□□□□ -0.63
SCMH1-201ENST00000326197 LRRC45Q96CN5 670 aa11.15□□□□□ -0.63
SCMH1-201ENST00000326197 CCDC87Q9NVE4 849 aa11.15□□□□□ -0.63
SCMH1-201ENST00000326197 RNF14Q9UBS8 474 aa11.15□□□□□ -0.63
SCMH1-201ENST00000326197 NUP188Q5SRE5 1749 aa11.14□□□□□ -0.63
SCMH1-201ENST00000326197 TLDC2A0PJX2 215 aa11.14□□□□□ -0.63
SCMH1-201ENST00000326197 CACNB1Q02641 598 aaPredicted RBP11.14□□□□□ -0.63
SCMH1-201ENST00000326197 LRRC15Q8TF66 581 aa11.14□□□□□ -0.63
SCMH1-201ENST00000326197 NSUN4Q96CB9 384 aaKnown RBP11.14□□□□□ -0.63
SCMH1-201ENST00000326197 FAM84BQ96KN1 310 aaPredicted RBP11.14□□□□□ -0.63
SCMH1-201ENST00000326197 UBA5Q9GZZ9 404 aa11.14□□□□□ -0.63
SCMH1-201ENST00000326197 DPH5Q9H2P9 285 aa11.14□□□□□ -0.63
SCMH1-201ENST00000326197 BARHL2Q9NY43 387 aa11.14□□□□□ -0.63
SCMH1-201ENST00000326197 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.14□□□□□ -0.63
SCMH1-201ENST00000326197 SIK3Q9Y2K2 1263 aa11.14□□□□□ -0.63
SCMH1-201ENST00000326197 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.14□□□□□ -0.63
SCMH1-201ENST00000326197 PKD1L3Q7Z443 1732 aa11.14□□□□□ -0.63
SCMH1-201ENST00000326197 SERPING1P05155 500 aa11.14□□□□□ -0.63
SCMH1-201ENST00000326197 TMOD1P28289 359 aa11.14□□□□□ -0.63
SCMH1-201ENST00000326197 E2F5Q15329 346 aa11.14□□□□□ -0.63
SCMH1-201ENST00000326197 GALNT17Q6IS24 598 aa11.14□□□□□ -0.63
SCMH1-201ENST00000326197 USP17L2Q6R6M4 530 aa11.14□□□□□ -0.63
SCMH1-201ENST00000326197 RUFY4Q6ZNE9 571 aa11.14□□□□□ -0.63
SCMH1-201ENST00000326197 UNC13DQ70J99 1090 aa11.14□□□□□ -0.63
SCMH1-201ENST00000326197 CNPY4Q8N129 248 aa11.14□□□□□ -0.63
SCMH1-201ENST00000326197 CCDC113Q9H0I3 377 aa11.14□□□□□ -0.63
SCMH1-201ENST00000326197 STXBP3O00186 592 aa11.13□□□□□ -0.63
SCMH1-201ENST00000326197 ADAMTS2O95450 1211 aa11.13□□□□□ -0.63
SCMH1-201ENST00000326197 SWT1Q5T5J6 900 aaKnown RBP11.13□□□□□ -0.63
SCMH1-201ENST00000326197 CENPPQ6IPU0 288 aa11.13□□□□□ -0.63
SCMH1-201ENST00000326197 RCSD1Q6JBY9 416 aa11.13□□□□□ -0.63
SCMH1-201ENST00000326197 MAPKAPK5Q8IW41 473 aa11.13□□□□□ -0.63
SCMH1-201ENST00000326197 ZSCAN29Q8IWY8 852 aaPredicted RBP11.13□□□□□ -0.63
SCMH1-201ENST00000326197 TGFBRAP1Q8WUH2 860 aa11.13□□□□□ -0.63
SCMH1-201ENST00000326197 KLC4Q9NSK0 619 aa11.13□□□□□ -0.63
SCMH1-201ENST00000326197 TMEM260Q9NX78 707 aa11.13□□□□□ -0.63
SCMH1-201ENST00000326197 NOVA2Q9UNW9 492 aaKnown RBP11.13□□□□□ -0.63
SCMH1-201ENST00000326197 ZNF652Q9Y2D9 606 aa11.13□□□□□ -0.63
SCMH1-201ENST00000326197 COL4A3BPQ9Y5P4 624 aa11.13□□□□□ -0.63
SCMH1-201ENST00000326197 LRP6O75581 1613 aa11.13□□□□□ -0.63
SCMH1-201ENST00000326197 KRIT1O00522 736 aa11.13□□□□□ -0.63
SCMH1-201ENST00000326197 CHUKO15111 745 aa11.13□□□□□ -0.63
SCMH1-201ENST00000326197 PRPHP41219 470 aa11.13□□□□□ -0.63
SCMH1-201ENST00000326197 GRM4Q14833 912 aa11.13□□□□□ -0.63
SCMH1-201ENST00000326197 SPTY2D1Q68D10 685 aaPredicted RBP11.13□□□□□ -0.63
SCMH1-201ENST00000326197 TMED8Q6PL24 325 aaPredicted RBP11.13□□□□□ -0.63
SCMH1-201ENST00000326197 DGKHQ86XP1 1220 aa11.13□□□□□ -0.63
SCMH1-201ENST00000326197 DNAAF5Q86Y56 855 aa11.13□□□□□ -0.63
SCMH1-201ENST00000326197 CACNA2D3Q8IZS8 1091 aa11.13□□□□□ -0.63
SCMH1-201ENST00000326197 IQCKQ8N0W5 287 aa11.13□□□□□ -0.63
SCMH1-201ENST00000326197 DDX12PQ92771 950 aa11.13□□□□□ -0.63
SCMH1-201ENST00000326197 SELENOSQ9BQE4 189 aa11.13□□□□□ -0.63
SCMH1-201ENST00000326197 PACSIN1Q9BY11 444 aa11.13□□□□□ -0.63
SCMH1-201ENST00000326197 DDX47Q9H0S4 455 aaKnown RBP11.13□□□□□ -0.63
SCMH1-201ENST00000326197 SEPT11Q9NVA2 429 aaKnown RBP11.13□□□□□ -0.63
SCMH1-201ENST00000326197 KLRK1P26718 216 aa11.13□□□□□ -0.63
SCMH1-201ENST00000326197 CRKLP46109 303 aaKnown RBP11.13□□□□□ -0.63
SCMH1-201ENST00000326197 FKBP3Q00688 224 aaKnown RBP11.13□□□□□ -0.63
SCMH1-201ENST00000326197 LRRC63Q05C16 580 aa11.13□□□□□ -0.63
SCMH1-201ENST00000326197 HERC4Q5GLZ8 1057 aaPredicted RBP11.13□□□□□ -0.63
SCMH1-201ENST00000326197 ADAT2Q7Z6V5 191 aaKnown RBP11.13□□□□□ -0.63
SCMH1-201ENST00000326197 CCDC13Q8IYE1 715 aa11.13□□□□□ -0.63
SCMH1-201ENST00000326197 GUF1Q8N442 669 aaKnown RBP11.13□□□□□ -0.63
SCMH1-201ENST00000326197 PRPF38AQ8NAV1 312 aaKnown RBP11.13□□□□□ -0.63
SCMH1-201ENST00000326197 GLIS3Q8NEA6 775 aa11.13□□□□□ -0.63
SCMH1-201ENST00000326197 NUCKS1Q9H1E3 243 aaKnown RBP11.13□□□□□ -0.63
SCMH1-201ENST00000326197 TAF1DQ9H5J8 278 aaPredicted RBP11.13□□□□□ -0.63
SCMH1-201ENST00000326197 ERFEQ4G0M1 354 aa11.12□□□□□ -0.63
SCMH1-201ENST00000326197 FAM26FQ5R3K3 315 aa11.12□□□□□ -0.63
SCMH1-201ENST00000326197 CYFIP2Q96F07 1278 aa11.12□□□□□ -0.63
SCMH1-201ENST00000326197 PIGSQ96S52 555 aa11.12□□□□□ -0.63
SCMH1-201ENST00000326197 TMEM47Q9BQJ4 181 aa11.12□□□□□ -0.63
SCMH1-201ENST00000326197 A0A087X0T9 212 aa11.12□□□□□ -0.63
SCMH1-201ENST00000326197 SSU72P8A0A1W2PR75 194 aa11.12□□□□□ -0.63
SCMH1-201ENST00000326197 GMNCA6NCL1 334 aa11.12□□□□□ -0.63
SCMH1-201ENST00000326197 DISP2A7MBM2 1401 aa11.12□□□□□ -0.63
SCMH1-201ENST00000326197 CYTH3O43739 400 aa11.12□□□□□ -0.63
SCMH1-201ENST00000326197 FAM107AO95990 144 aa11.12□□□□□ -0.63
SCMH1-201ENST00000326197 FAM228BP0C875 321 aa11.12□□□□□ -0.63
SCMH1-201ENST00000326197 EZRP15311 586 aaKnown RBP11.12□□□□□ -0.63
SCMH1-201ENST00000326197 CDC37Q16543 378 aaPredicted RBP11.12□□□□□ -0.63
SCMH1-201ENST00000326197 IFI16Q16666 785 aaKnown RBP11.12□□□□□ -0.63
SCMH1-201ENST00000326197 DCAF17Q5H9S7 520 aaPredicted RBP11.12□□□□□ -0.63
SCMH1-201ENST00000326197 MSL1Q68DK7 614 aa11.12□□□□□ -0.63
SCMH1-201ENST00000326197 PEX26Q7Z412 305 aa11.12□□□□□ -0.63
SCMH1-201ENST00000326197 TAX1BP1Q86VP1 789 aa11.12□□□□□ -0.63
SCMH1-201ENST00000326197 LRRC27Q9C0I9 530 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms