RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 PDE8AO60658 829 aa8.55□□□□□ -1.04
CIITA-201ENST00000324288 MCF2P10911 925 aa8.55□□□□□ -1.04
CIITA-201ENST00000324288 CASP14P31944 242 aa8.55□□□□□ -1.04
CIITA-201ENST00000324288 DOK7Q18PE1 504 aa8.55□□□□□ -1.04
CIITA-201ENST00000324288 CAPRIN2Q6IMN6 1127 aaKnown RBP8.55□□□□□ -1.04
CIITA-201ENST00000324288 RSRC2Q7L4I2 434 aaKnown RBP8.55□□□□□ -1.04
CIITA-201ENST00000324288 ZBTB8OSQ8IWT0 167 aa8.55□□□□□ -1.04
CIITA-201ENST00000324288 TRAIPQ9BWF2 469 aa8.55□□□□□ -1.04
CIITA-201ENST00000324288 SEPT9Q9UHD8 586 aaPredicted RBP8.55□□□□□ -1.04
CIITA-201ENST00000324288 TSR3Q9UJK0 312 aaKnown RBP8.55□□□□□ -1.04
CIITA-201ENST00000324288 NFU1Q9UMS0 254 aa8.55□□□□□ -1.04
CIITA-201ENST00000324288 TOM1O60784 492 aa8.55□□□□□ -1.04
CIITA-201ENST00000324288 PDE6AP16499 860 aa8.55□□□□□ -1.04
CIITA-201ENST00000324288 PPP1R2P41236 205 aa8.55□□□□□ -1.04
CIITA-201ENST00000324288 ZNF654Q8IZM8 581 aa8.55□□□□□ -1.04
CIITA-201ENST00000324288 DACH2Q96NX9 599 aa8.55□□□□□ -1.04
CIITA-201ENST00000324288 CACNA1CQ13936 2221 aa8.55□□□□□ -1.04
CIITA-201ENST00000324288 SGSM2O43147 1006 aa8.54□□□□□ -1.04
CIITA-201ENST00000324288 GYG1P46976 350 aa8.54□□□□□ -1.04
CIITA-201ENST00000324288 ACTR5Q9H9F9 607 aaPredicted RBP8.54□□□□□ -1.04
CIITA-201ENST00000324288 USP19O94966 1318 aa8.54□□□□□ -1.04
CIITA-201ENST00000324288 EIF2AK4Q9P2K8 1649 aaKnown RBP8.54□□□□□ -1.04
CIITA-201ENST00000324288 MAP3K7CLP57077 242 aa8.54□□□□□ -1.04
CIITA-201ENST00000324288 ZNF277Q9NRM2 450 aaPredicted RBP8.54□□□□□ -1.04
CIITA-201ENST00000324288 WARS2Q9UGM6 360 aaKnown RBP8.54□□□□□ -1.04
CIITA-201ENST00000324288 F5H423 210 aaPredicted RBP8.54□□□□□ -1.04
CIITA-201ENST00000324288 RAD23BP54727 409 aa8.54□□□□□ -1.04
CIITA-201ENST00000324288 ASPHQ12797 758 aa8.54□□□□□ -1.04
CIITA-201ENST00000324288 MDH1BQ5I0G3 518 aa8.54□□□□□ -1.04
CIITA-201ENST00000324288 FLCNQ8NFG4 579 aa8.54□□□□□ -1.04
CIITA-201ENST00000324288 ZMYND12Q9H0C1 365 aa8.54□□□□□ -1.04
CIITA-201ENST00000324288 CNOT10Q9H9A5 744 aaKnown RBP8.54□□□□□ -1.04
CIITA-201ENST00000324288 RTEL1Q9NZ71 1219 aa8.54□□□□□ -1.04
CIITA-201ENST00000324288 ARPP21Q9UBL0 812 aaPredicted RBP8.54□□□□□ -1.04
CIITA-201ENST00000324288 DAAM1Q9Y4D1 1078 aa8.54□□□□□ -1.04
CIITA-201ENST00000324288 RBL2Q08999 1139 aa8.54□□□□□ -1.04
CIITA-201ENST00000324288 DLGAP5Q15398 846 aa8.54□□□□□ -1.04
CIITA-201ENST00000324288 SCARA5Q6ZMJ2 495 aa8.54□□□□□ -1.04
CIITA-201ENST00000324288 PLBD2Q8NHP8 589 aa8.54□□□□□ -1.04
CIITA-201ENST00000324288 AKT3Q9Y243 479 aa8.54□□□□□ -1.04
CIITA-201ENST00000324288 CUL7Q14999 1698 aa8.54□□□□□ -1.04
CIITA-201ENST00000324288 YTHDC2Q9H6S0 1430 aaKnown RBP8.54□□□□□ -1.04
CIITA-201ENST00000324288 SYCE1LA8MT33 242 aa8.54□□□□□ -1.04
CIITA-201ENST00000324288 TMEM191BP0C7N4 346 aa8.54□□□□□ -1.04
CIITA-201ENST00000324288 TCP1P17987 556 aaKnown RBP8.54□□□□□ -1.04
CIITA-201ENST00000324288 NSFP46459 744 aaKnown RBP8.54□□□□□ -1.04
CIITA-201ENST00000324288 MKRN3Q13064 507 aaKnown RBP8.54□□□□□ -1.04
CIITA-201ENST00000324288 PGBD1Q96JS3 809 aa8.54□□□□□ -1.04
CIITA-201ENST00000324288 RASGRF2O14827 1237 aa8.54□□□□□ -1.04
CIITA-201ENST00000324288 NPR1P16066 1061 aa8.54□□□□□ -1.04
CIITA-201ENST00000324288 BCAMP50895 628 aa8.54□□□□□ -1.04
CIITA-201ENST00000324288 KRT27Q7Z3Y8 459 aa8.54□□□□□ -1.04
CIITA-201ENST00000324288 PI4K2BQ8TCG2 481 aa8.54□□□□□ -1.04
CIITA-201ENST00000324288 ZSCAN10Q96SZ4 725 aaPredicted RBP8.54□□□□□ -1.04
CIITA-201ENST00000324288 LZTS2Q9BRK4 669 aa8.54□□□□□ -1.04
CIITA-201ENST00000324288 SPTLC3Q9NUV7 552 aa8.54□□□□□ -1.04
CIITA-201ENST00000324288 RASSF10A6NK89 507 aa8.54□□□□□ -1.04
CIITA-201ENST00000324288 SUPT20HQ8NEM7 779 aa8.54□□□□□ -1.04
CIITA-201ENST00000324288 ARMCX3Q9UH62 379 aaPredicted RBP8.54□□□□□ -1.04
CIITA-201ENST00000324288 MAFGO15525 162 aa8.54□□□□□ -1.04
CIITA-201ENST00000324288 GANCQ8TET4 914 aa8.54□□□□□ -1.04
CIITA-201ENST00000324288 NT5C3AQ9H0P0 336 aa8.54□□□□□ -1.04
CIITA-201ENST00000324288 KDM3AQ9Y4C1 1321 aa8.54□□□□□ -1.04
CIITA-201ENST00000324288 LMTK3Q96Q04 1460 aa8.54□□□□□ -1.04
CIITA-201ENST00000324288 CHGBP05060 677 aa8.53□□□□□ -1.04
CIITA-201ENST00000324288 EIF4A3P38919 411 aaKnown RBP8.53□□□□□ -1.04
CIITA-201ENST00000324288 CASP8Q14790 479 aa8.53□□□□□ -1.04
CIITA-201ENST00000324288 RAB44Q7Z6P3 723 aaPredicted RBP8.53□□□□□ -1.04
CIITA-201ENST00000324288 IPO11Q9UI26 975 aaKnown RBP8.53□□□□□ -1.04
CIITA-201ENST00000324288 ALS2CLQ60I27 953 aa8.53□□□□□ -1.04
CIITA-201ENST00000324288 GRK7Q8WTQ7 553 aa8.53□□□□□ -1.04
CIITA-201ENST00000324288 NRBF2Q96F24 287 aa8.53□□□□□ -1.04
CIITA-201ENST00000324288 GNA14O95837 355 aa8.53□□□□□ -1.04
CIITA-201ENST00000324288 PPP2R5EQ16537 467 aa8.53□□□□□ -1.04
CIITA-201ENST00000324288 SPATA1Q5VX52 437 aa8.53□□□□□ -1.04
CIITA-201ENST00000324288 CCDC84Q86UT8 332 aaPredicted RBP8.53□□□□□ -1.04
CIITA-201ENST00000324288 TRIML2Q8N7C3 387 aa8.53□□□□□ -1.04
CIITA-201ENST00000324288 TTC1Q99614 292 aa8.53□□□□□ -1.04
CIITA-201ENST00000324288 POLR3CQ9BUI4 534 aaPredicted RBP8.53□□□□□ -1.04
CIITA-201ENST00000324288 GLT8D2Q9H1C3 349 aa8.53□□□□□ -1.04
CIITA-201ENST00000324288 A0A0D9SFI3 127 aa8.53□□□□□ -1.04
CIITA-201ENST00000324288 POLR2MP0CAP2 368 aa8.53□□□□□ -1.04
CIITA-201ENST00000324288 CYP27A1Q02318 531 aa8.53□□□□□ -1.04
CIITA-201ENST00000324288 LRRC41Q15345 812 aa8.53□□□□□ -1.04
CIITA-201ENST00000324288 ARMCX5Q6P1M9 558 aa8.53□□□□□ -1.04
CIITA-201ENST00000324288 SYMPKQ92797 1274 aaKnown RBP8.53□□□□□ -1.04
CIITA-201ENST00000324288 SLC38A10Q9HBR0 1119 aa8.53□□□□□ -1.04
CIITA-201ENST00000324288 CDC25BP30305 580 aa8.53□□□□□ -1.04
CIITA-201ENST00000324288 MRPS15P82914 257 aaKnown RBP8.53□□□□□ -1.04
CIITA-201ENST00000324288 OCA2Q04671 838 aa8.53□□□□□ -1.04
CIITA-201ENST00000324288 ZNF790Q6PG37 636 aa8.53□□□□□ -1.04
CIITA-201ENST00000324288 CCNYQ8ND76 341 aa8.53□□□□□ -1.04
CIITA-201ENST00000324288 FAM149B1Q96BN6 582 aa8.53□□□□□ -1.04
CIITA-201ENST00000324288 ING2Q9H160 280 aa8.53□□□□□ -1.04
CIITA-201ENST00000324288 DNMBPQ6XZF7 1577 aa8.53□□□□□ -1.04
CIITA-201ENST00000324288 ESRRAP11474 423 aaPredicted RBP8.53□□□□□ -1.04
CIITA-201ENST00000324288 PRPSAP1Q14558 356 aa8.53□□□□□ -1.04
CIITA-201ENST00000324288 DPCR1Q3MIW9 517 aa8.53□□□□□ -1.04
CIITA-201ENST00000324288 ZBTB33Q86T24 672 aa8.53□□□□□ -1.04
CIITA-201ENST00000324288 PI4K2BG5E9Z4 385 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms