RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 CCDC70Q6NSX1 233 aa21.96■■□□□ 1.11
CRLF3-201ENST00000324238 LRRC4BQ9NT99 713 aa21.96■■□□□ 1.11
CRLF3-201ENST00000324238 MPHOSPH10O00566 681 aaKnown RBP21.96■■□□□ 1.11
CRLF3-201ENST00000324238 GNGT1P63211 74 aa21.96■■□□□ 1.11
CRLF3-201ENST00000324238 KLHDC7AQ5VTJ3 777 aa21.96■■□□□ 1.11
CRLF3-201ENST00000324238 PRR5LQ6MZQ0 368 aa21.96■■□□□ 1.11
CRLF3-201ENST00000324238 LRRC55Q6ZSA7 311 aa21.96■■□□□ 1.11
CRLF3-201ENST00000324238 E9PMD0 336 aa21.96■■□□□ 1.11
CRLF3-201ENST00000324238 PPFIA4O75335 1185 aa21.96■■□□□ 1.11
CRLF3-201ENST00000324238 GALNT17Q6IS24 598 aa21.96■■□□□ 1.11
CRLF3-201ENST00000324238 C8orf74Q6P047 294 aa21.96■■□□□ 1.11
CRLF3-201ENST00000324238 UNC13DQ70J99 1090 aa21.96■■□□□ 1.11
CRLF3-201ENST00000324238 RPGRIP1Q96KN7 1286 aa21.96■■□□□ 1.11
CRLF3-201ENST00000324238 CUEDC2Q9H467 287 aa21.96■■□□□ 1.11
CRLF3-201ENST00000324238 POLLQ9UGP5 575 aa21.96■■□□□ 1.11
CRLF3-201ENST00000324238 PALMO75781 387 aa21.95■■□□□ 1.1
CRLF3-201ENST00000324238 EHHADHQ08426 723 aa21.95■■□□□ 1.1
CRLF3-201ENST00000324238 TBC1D5Q92609 795 aa21.95■■□□□ 1.1
CRLF3-201ENST00000324238 ALS2CR12Q96Q35 445 aa21.95■■□□□ 1.1
CRLF3-201ENST00000324238 MTMR9Q96QG7 549 aa21.95■■□□□ 1.1
CRLF3-201ENST00000324238 LSM14BQ9BX40 385 aaKnown RBP21.95■■□□□ 1.1
CRLF3-201ENST00000324238 SPZ1Q9BXG8 430 aa21.95■■□□□ 1.1
CRLF3-201ENST00000324238 ADAMTS1Q9UHI8 967 aa21.95■■□□□ 1.1
CRLF3-201ENST00000324238 HYOU1Q9Y4L1 999 aa21.95■■□□□ 1.1
CRLF3-201ENST00000324238 GUCY2DQ02846 1103 aa21.95■■□□□ 1.1
CRLF3-201ENST00000324238 PDCLQ13371 301 aa21.95■■□□□ 1.1
CRLF3-201ENST00000324238 SHROOM1Q2M3G4 852 aaPredicted RBP21.95■■□□□ 1.1
CRLF3-201ENST00000324238 DPP8Q6V1X1 898 aaPredicted RBP21.95■■□□□ 1.1
CRLF3-201ENST00000324238 TSGA10Q9BZW7 698 aa21.95■■□□□ 1.1
CRLF3-201ENST00000324238 DLEC1Q9Y238 1755 aa21.95■■□□□ 1.1
CRLF3-201ENST00000324238 A0A1W2PQJ5 194 aa21.94■■□□□ 1.1
CRLF3-201ENST00000324238 ZEB2O60315 1214 aa21.94■■□□□ 1.1
CRLF3-201ENST00000324238 LIG3P49916 1009 aa21.94■■□□□ 1.1
CRLF3-201ENST00000324238 CACNB3P54284 484 aa21.94■■□□□ 1.1
CRLF3-201ENST00000324238 RAPGEF1Q13905 1077 aa21.94■■□□□ 1.1
CRLF3-201ENST00000324238 DOK7Q18PE1 504 aa21.94■■□□□ 1.1
CRLF3-201ENST00000324238 TTMPQ5BVD1 217 aa21.94■■□□□ 1.1
CRLF3-201ENST00000324238 FNBP4Q8N3X1 1017 aaPredicted RBP21.94■■□□□ 1.1
CRLF3-201ENST00000324238 BCAS4Q8TDM0 211 aa21.94■■□□□ 1.1
CRLF3-201ENST00000324238 EPB41L5Q9HCM4 733 aa21.94■■□□□ 1.1
CRLF3-201ENST00000324238 STIM2Q9P246 746 aa21.94■■□□□ 1.1
CRLF3-201ENST00000324238 SCN7AQ01118 1682 aa21.94■■□□□ 1.1
CRLF3-201ENST00000324238 KLRC1P26715 233 aa21.94■■□□□ 1.1
CRLF3-201ENST00000324238 PAFAH1B1P43034 410 aa21.94■■□□□ 1.1
CRLF3-201ENST00000324238 GSTO1P78417 241 aa21.94■■□□□ 1.1
CRLF3-201ENST00000324238 HGSNATQ68CP4 663 aa21.94■■□□□ 1.1
CRLF3-201ENST00000324238 PDXDC1Q6P996 788 aa21.94■■□□□ 1.1
CRLF3-201ENST00000324238 MMGT1Q8N4V1 131 aa21.94■■□□□ 1.1
CRLF3-201ENST00000324238 RAD54LQ92698 747 aa21.94■■□□□ 1.1
CRLF3-201ENST00000324238 BCAS3Q9H6U6 928 aa21.94■■□□□ 1.1
CRLF3-201ENST00000324238 RPS6KA5O75582 802 aa21.93■■□□□ 1.1
CRLF3-201ENST00000324238 LDHCP07864 332 aa21.93■■□□□ 1.1
CRLF3-201ENST00000324238 ACTN1P12814 892 aa21.93■■□□□ 1.1
CRLF3-201ENST00000324238 KRT79Q5XKE5 535 aa21.93■■□□□ 1.1
CRLF3-201ENST00000324238 KLHL7Q8IXQ5 586 aa21.93■■□□□ 1.1
CRLF3-201ENST00000324238 FAM133AQ8N9E0 248 aa21.93■■□□□ 1.1
CRLF3-201ENST00000324238 KRT12Q99456 494 aa21.93■■□□□ 1.1
CRLF3-201ENST00000324238 TSPYL1Q9H0U9 437 aa21.93■■□□□ 1.1
CRLF3-201ENST00000324238 GGA1Q9UJY5 639 aa21.93■■□□□ 1.1
CRLF3-201ENST00000324238 USP21Q9UK80 565 aa21.93■■□□□ 1.1
CRLF3-201ENST00000324238 AKR1B1P15121 316 aa21.93■■□□□ 1.1
CRLF3-201ENST00000324238 IQCEQ6IPM2 695 aa21.93■■□□□ 1.1
CRLF3-201ENST00000324238 ZNF662Q6ZS27 426 aa21.93■■□□□ 1.1
CRLF3-201ENST00000324238 KCTD1Q719H9 257 aa21.93■■□□□ 1.1
CRLF3-201ENST00000324238 CAPS2Q9BXY5 557 aa21.93■■□□□ 1.1
CRLF3-201ENST00000324238 ZNF219Q9P2Y4 722 aaPredicted RBP21.93■■□□□ 1.1
CRLF3-201ENST00000324238 IRS2Q9Y4H2 1338 aa21.93■■□□□ 1.1
CRLF3-201ENST00000324238 KIAA1551Q9HCM1 1747 aa21.93■■□□□ 1.1
CRLF3-201ENST00000324238 NOL4O94818 638 aa21.93■■□□□ 1.1
CRLF3-201ENST00000324238 STAT3P40763 770 aa21.93■■□□□ 1.1
CRLF3-201ENST00000324238 SNAP25P60880 206 aa21.93■■□□□ 1.1
CRLF3-201ENST00000324238 FAM83BQ5T0W9 1011 aa21.93■■□□□ 1.1
CRLF3-201ENST00000324238 NEDD1Q8NHV4 660 aa21.93■■□□□ 1.1
CRLF3-201ENST00000324238 ZIM3Q96PE6 472 aa21.93■■□□□ 1.1
CRLF3-201ENST00000324238 CENPHQ9H3R5 247 aa21.93■■□□□ 1.1
CRLF3-201ENST00000324238 LEMD3Q9Y2U8 911 aa21.93■■□□□ 1.1
CRLF3-201ENST00000324238 PDHBP11177 359 aa21.92■■□□□ 1.1
CRLF3-201ENST00000324238 ADCY7P51828 1080 aa21.92■■□□□ 1.1
CRLF3-201ENST00000324238 COASYQ13057 564 aa21.92■■□□□ 1.1
CRLF3-201ENST00000324238 FIGNQ5HY92 759 aa21.92■■□□□ 1.1
CRLF3-201ENST00000324238 MICALL1Q8N3F8 863 aa21.92■■□□□ 1.1
CRLF3-201ENST00000324238 CCDC43Q96MW1 224 aaKnown RBP21.92■■□□□ 1.1
CRLF3-201ENST00000324238 A0A087X0T9 212 aa21.92■■□□□ 1.1
CRLF3-201ENST00000324238 FAM228BP0C875 321 aa21.92■■□□□ 1.1
CRLF3-201ENST00000324238 TMEM266Q2M3C6 531 aa21.92■■□□□ 1.1
CRLF3-201ENST00000324238 NOX5Q96PH1 765 aa21.92■■□□□ 1.1
CRLF3-201ENST00000324238 RUFY1Q96T51 708 aa21.92■■□□□ 1.1
CRLF3-201ENST00000324238 SNED1Q8TER0 1413 aa21.91■■□□□ 1.1
CRLF3-201ENST00000324238 PPP1R11O60927 126 aaPredicted RBP21.91■■□□□ 1.1
CRLF3-201ENST00000324238 TAL1P17542 331 aaPredicted RBP21.91■■□□□ 1.1
CRLF3-201ENST00000324238 CCDC84Q86UT8 332 aaPredicted RBP21.91■■□□□ 1.1
CRLF3-201ENST00000324238 GUF1Q8N442 669 aaKnown RBP21.91■■□□□ 1.1
CRLF3-201ENST00000324238 KIAA1024Q9UPX6 916 aa21.91■■□□□ 1.1
CRLF3-201ENST00000324238 CASZ1Q86V15 1759 aa21.91■■□□□ 1.1
CRLF3-201ENST00000324238 USP17L15C9J2P7 530 aa21.91■■□□□ 1.1
CRLF3-201ENST00000324238 USP17L13C9JLJ4 530 aa21.91■■□□□ 1.1
CRLF3-201ENST00000324238 USP17L11C9JVI0 530 aa21.91■■□□□ 1.1
CRLF3-201ENST00000324238 USP17L18D6R9N7 530 aa21.91■■□□□ 1.1
CRLF3-201ENST00000324238 USP17L22D6RA61 530 aa21.91■■□□□ 1.1
CRLF3-201ENST00000324238 USP17L17D6RBQ6 530 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms