RNA–Protein interactions for RNA: ENST00000322326.12

IFT20-201, Transcript of intraflagellar transport 20, humanhuman

TSL 2

Gene IFT20, Length 820 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-201ENST00000322326 AP5M1Q9H0R1 490 aa18.27■□□□□ 0.52
IFT20-201ENST00000322326 SH3GLB2Q9NR46 395 aa18.27■□□□□ 0.52
IFT20-201ENST00000322326 LAMA2P24043 3122 aaKnown RBP18.26■□□□□ 0.51
IFT20-201ENST00000322326 ALAS1P13196 640 aa18.26■□□□□ 0.51
IFT20-201ENST00000322326 SYT1P21579 422 aa18.26■□□□□ 0.51
IFT20-201ENST00000322326 FOSBP53539 338 aa18.26■□□□□ 0.51
IFT20-201ENST00000322326 NAPAP54920 295 aa18.26■□□□□ 0.51
IFT20-201ENST00000322326 WWC2Q6AWC2 1192 aa18.26■□□□□ 0.51
IFT20-201ENST00000322326 CXCL17Q6UXB2 119 aa18.26■□□□□ 0.51
IFT20-201ENST00000322326 SLC43A3Q8NBI5 491 aa18.26■□□□□ 0.51
IFT20-201ENST00000322326 PPM1EQ8WY54 764 aa18.26■□□□□ 0.51
IFT20-201ENST00000322326 HERVK_113Q902F9 699 aa18.26■□□□□ 0.51
IFT20-201ENST00000322326 GPKOWQ92917 476 aaPredicted RBP eCLIP18.26■□□□□ 0.51
IFT20-201ENST00000322326 AGBL1Q96MI9 1066 aa18.26■□□□□ 0.51
IFT20-201ENST00000322326 AIFM3Q96NN9 605 aa18.26■□□□□ 0.51
IFT20-201ENST00000322326 TRERF1Q96PN7 1200 aa18.26■□□□□ 0.51
IFT20-201ENST00000322326 HIPK3Q9H422 1215 aa18.26■□□□□ 0.51
IFT20-201ENST00000322326 PRDM12Q9H4Q4 367 aa18.26■□□□□ 0.51
IFT20-201ENST00000322326 BARHL2Q9NY43 387 aa18.26■□□□□ 0.51
IFT20-201ENST00000322326 GNEQ9Y223 722 aaKnown RBP18.26■□□□□ 0.51
IFT20-201ENST00000322326 ZNF536O15090 1300 aa18.25■□□□□ 0.51
IFT20-201ENST00000322326 VPS37CA5D8V6 355 aaPredicted RBP18.25■□□□□ 0.51
IFT20-201ENST00000322326 SOWAHBA6NEL2 793 aa18.25■□□□□ 0.51
IFT20-201ENST00000322326 STX6O43752 255 aa18.25■□□□□ 0.51
IFT20-201ENST00000322326 FGBP02675 491 aa18.25■□□□□ 0.51
IFT20-201ENST00000322326 DDIT3P35638 169 aa18.25■□□□□ 0.51
IFT20-201ENST00000322326 SNAP25P60880 206 aa18.25■□□□□ 0.51
IFT20-201ENST00000322326 ITGA7Q13683 1181 aa18.25■□□□□ 0.51
IFT20-201ENST00000322326 FSCN1Q16658 493 aaKnown RBP18.25■□□□□ 0.51
IFT20-201ENST00000322326 CHMP5Q9NZZ3 219 aa18.25■□□□□ 0.51
IFT20-201ENST00000322326 VPS54Q9P1Q0 977 aa18.25■□□□□ 0.51
IFT20-201ENST00000322326 ASTN1O14525 1302 aa18.24■□□□□ 0.51
IFT20-201ENST00000322326 STXBP3O00186 592 aa18.24■□□□□ 0.51
IFT20-201ENST00000322326 TNFRSF10AO00220 468 aa18.24■□□□□ 0.51
IFT20-201ENST00000322326 DYNC1LI2O43237 492 aaPredicted RBP18.24■□□□□ 0.51
IFT20-201ENST00000322326 ICAM1P05362 532 aa18.24■□□□□ 0.51
IFT20-201ENST00000322326 NUCB2P80303 420 aa18.24■□□□□ 0.51
IFT20-201ENST00000322326 SAFBQ15424 915 aaKnown RBP eCLIP18.24■□□□□ 0.51
IFT20-201ENST00000322326 KRT40Q6A162 431 aa18.24■□□□□ 0.51
IFT20-201ENST00000322326 IQSEC1Q6DN90 963 aa18.24■□□□□ 0.51
IFT20-201ENST00000322326 FBXO18Q8NFZ0 1043 aa18.24■□□□□ 0.51
IFT20-201ENST00000322326 ATXN2LQ8WWM7 1075 aaKnown RBP18.24■□□□□ 0.51
IFT20-201ENST00000322326 SLC28A3Q9HAS3 691 aa18.24■□□□□ 0.51
IFT20-201ENST00000322326 BRMS1Q9HCU9 246 aa18.24■□□□□ 0.51
IFT20-201ENST00000322326 THEGQ9P2T0 379 aa18.24■□□□□ 0.51
IFT20-201ENST00000322326 Q9Y3F1 56 aa18.24■□□□□ 0.51
IFT20-201ENST00000322326 PCDHA1Q9Y5I3 950 aa18.24■□□□□ 0.51
IFT20-201ENST00000322326 MYO9BQ13459 2157 aa18.24■□□□□ 0.51
IFT20-201ENST00000322326 LRRC37A2A6NM11 1700 aa18.23■□□□□ 0.51
IFT20-201ENST00000322326 PPP1R11O60927 126 aaPredicted RBP18.23■□□□□ 0.51
IFT20-201ENST00000322326 SMPD1P17405 629 aa18.23■□□□□ 0.51
IFT20-201ENST00000322326 CALML3P27482 149 aa18.23■□□□□ 0.51
IFT20-201ENST00000322326 NLRP5P59047 1200 aa18.23■□□□□ 0.51
IFT20-201ENST00000322326 GUCY1B3Q02153 619 aa18.23■□□□□ 0.51
IFT20-201ENST00000322326 CCPG1Q9ULG6 757 aa18.23■□□□□ 0.51
IFT20-201ENST00000322326 ABCB11O95342 1321 aa18.23■□□□□ 0.51
IFT20-201ENST00000322326 ESYT2A0FGR8 921 aa18.22■□□□□ 0.51
IFT20-201ENST00000322326 IGFBP4P22692 258 aa18.22■□□□□ 0.51
IFT20-201ENST00000322326 USH1GQ495M9 461 aa18.22■□□□□ 0.51
IFT20-201ENST00000322326 GALNT17Q6IS24 598 aa18.22■□□□□ 0.51
IFT20-201ENST00000322326 EEPD1Q7L9B9 569 aa18.22■□□□□ 0.51
IFT20-201ENST00000322326 RPUSD2Q8IZ73 545 aaKnown RBP18.22■□□□□ 0.51
IFT20-201ENST00000322326 NKX2-4Q9H2Z4 354 aa18.22■□□□□ 0.51
IFT20-201ENST00000322326 C6orf50Q9HD87 102 aa18.22■□□□□ 0.51
IFT20-201ENST00000322326 VTA1Q9NP79 307 aa18.22■□□□□ 0.51
IFT20-201ENST00000322326 CYP39A1Q9NYL5 469 aa18.22■□□□□ 0.51
IFT20-201ENST00000322326 CXXC1Q9P0U4 656 aaPredicted RBP18.22■□□□□ 0.51
IFT20-201ENST00000322326 UMODL1Q5DID0 1318 aa18.22■□□□□ 0.51
IFT20-201ENST00000322326 GBF1Q92538 1859 aa18.21■□□□□ 0.51
IFT20-201ENST00000322326 MMP1P03956 469 aa18.21■□□□□ 0.51
IFT20-201ENST00000322326 GNA11P29992 359 aa18.21■□□□□ 0.51
IFT20-201ENST00000322326 CCL23P55773 120 aa18.21■□□□□ 0.51
IFT20-201ENST00000322326 GNL2Q13823 731 aaKnown RBP18.21■□□□□ 0.51
IFT20-201ENST00000322326 MUM1L1Q5H9M0 696 aa18.21■□□□□ 0.51
IFT20-201ENST00000322326 TAPT1Q6NXT6 567 aa18.21■□□□□ 0.51
IFT20-201ENST00000322326 NSMFQ6X4W1 530 aa18.21■□□□□ 0.51
IFT20-201ENST00000322326 OTOP2Q7RTS6 562 aa18.21■□□□□ 0.51
IFT20-201ENST00000322326 FBXO16Q8IX29 292 aaPredicted RBP18.21■□□□□ 0.51
IFT20-201ENST00000322326 BICD2Q8TD16 824 aa18.21■□□□□ 0.51
IFT20-201ENST00000322326 PHF20Q9BVI0 1012 aa18.21■□□□□ 0.51
IFT20-201ENST00000322326 NOC4LQ9BVI4 516 aaKnown RBP18.21■□□□□ 0.51
IFT20-201ENST00000322326 GLT8D2Q9H1C3 349 aa18.21■□□□□ 0.51
IFT20-201ENST00000322326 PDGFCQ9NRA1 345 aa18.21■□□□□ 0.51
IFT20-201ENST00000322326 GJB4Q9NTQ9 266 aa18.21■□□□□ 0.51
IFT20-201ENST00000322326 KCNJ14Q9UNX9 436 aa18.21■□□□□ 0.51
IFT20-201ENST00000322326 MTMR6Q9Y217 621 aa18.21■□□□□ 0.51
IFT20-201ENST00000322326 MRPL11Q9Y3B7 192 aaKnown RBP18.21■□□□□ 0.51
IFT20-201ENST00000322326 GRIN2DO15399 1336 aa18.21■□□□□ 0.51
IFT20-201ENST00000322326 TTC28Q96AY4 2481 aa18.2■□□□□ 0.5
IFT20-201ENST00000322326 SMCO2A6NFE2 343 aa18.2■□□□□ 0.5
IFT20-201ENST00000322326 B4GALT4O60513 344 aa18.2■□□□□ 0.5
IFT20-201ENST00000322326 ZSCAN22P10073 491 aaPredicted RBP18.2■□□□□ 0.5
IFT20-201ENST00000322326 KRT2P35908 639 aa18.2■□□□□ 0.5
IFT20-201ENST00000322326 ADCY7P51828 1080 aa18.2■□□□□ 0.5
IFT20-201ENST00000322326 MCTP1Q6DN14 999 aa18.2■□□□□ 0.5
IFT20-201ENST00000322326 TYW1BQ6NUM6 668 aa18.2■□□□□ 0.5
IFT20-201ENST00000322326 ASB2Q96Q27 587 aa18.2■□□□□ 0.5
IFT20-201ENST00000322326 ZMYND12Q9H0C1 365 aa18.2■□□□□ 0.5
IFT20-201ENST00000322326 TRPV6Q9H1D0 765 aa18.2■□□□□ 0.5
IFT20-201ENST00000322326 ADD3Q9UEY8 706 aaKnown RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms