RNA–Protein interactions for RNA: ENST00000321253.6

TUBA3D-201, Transcript of tubulin alpha 3d, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA3D, Length 1,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-201ENST00000321253 BMP8BP34820 402 aa16.79■□□□□ 0.28
TUBA3D-201ENST00000321253 SSRP1Q08945 709 aaKnown RBP16.79■□□□□ 0.28
TUBA3D-201ENST00000321253 FAAP100Q0VG06 881 aa16.79■□□□□ 0.28
TUBA3D-201ENST00000321253 AP3B2Q13367 1082 aa16.79■□□□□ 0.28
TUBA3D-201ENST00000321253 PKN1Q16512 942 aa16.79■□□□□ 0.28
TUBA3D-201ENST00000321253 DGKDQ16760 1214 aa16.79■□□□□ 0.28
TUBA3D-201ENST00000321253 CELF3Q5SZQ8 465 aaKnown RBP16.79■□□□□ 0.28
TUBA3D-201ENST00000321253 FAM126BQ8IXS8 530 aa16.79■□□□□ 0.28
TUBA3D-201ENST00000321253 SLC43A3Q8NBI5 491 aa16.79■□□□□ 0.28
TUBA3D-201ENST00000321253 CCDC148Q8NFR7 591 aa16.79■□□□□ 0.28
TUBA3D-201ENST00000321253 PPTC7Q8NI37 304 aa16.79■□□□□ 0.28
TUBA3D-201ENST00000321253 TRIM43Q96BQ3 446 aaPredicted RBP16.79■□□□□ 0.28
TUBA3D-201ENST00000321253 SPATA33Q96N06 139 aa16.79■□□□□ 0.28
TUBA3D-201ENST00000321253 SLKQ9H2G2 1235 aaPredicted RBP16.79■□□□□ 0.28
TUBA3D-201ENST00000321253 PRO3102Q9H379 93 aa16.79■□□□□ 0.28
TUBA3D-201ENST00000321253 MLXIPQ9HAP2 919 aa16.79■□□□□ 0.28
TUBA3D-201ENST00000321253 C6orf50Q9HD87 102 aa16.79■□□□□ 0.28
TUBA3D-201ENST00000321253 PCDH10Q9P2E7 1040 aa16.79■□□□□ 0.28
TUBA3D-201ENST00000321253 TRIOBPQ9H2D6 2365 aa16.79■□□□□ 0.28
TUBA3D-201ENST00000321253 A0A1W2PPC1 479 aa16.78■□□□□ 0.28
TUBA3D-201ENST00000321253 ESYT2A0FGR8 921 aa16.78■□□□□ 0.28
TUBA3D-201ENST00000321253 SPATA31C2B4DYI2 1134 aa16.78■□□□□ 0.28
TUBA3D-201ENST00000321253 KIAA0355O15063 1070 aa16.78■□□□□ 0.28
TUBA3D-201ENST00000321253 SORBS3O60504 671 aa16.78■□□□□ 0.28
TUBA3D-201ENST00000321253 CDKL5O76039 1030 aa16.78■□□□□ 0.28
TUBA3D-201ENST00000321253 GNA11P29992 359 aa16.78■□□□□ 0.28
TUBA3D-201ENST00000321253 AK2P54819 239 aa16.78■□□□□ 0.28
TUBA3D-201ENST00000321253 NEDD9Q14511 834 aa16.78■□□□□ 0.28
TUBA3D-201ENST00000321253 FAM47CQ5HY64 1035 aa16.78■□□□□ 0.28
TUBA3D-201ENST00000321253 MYSM1Q5VVJ2 828 aa16.78■□□□□ 0.28
TUBA3D-201ENST00000321253 CDHR1Q96JP9 859 aa16.78■□□□□ 0.28
TUBA3D-201ENST00000321253 GRIN2DO15399 1336 aa16.77■□□□□ 0.28
TUBA3D-201ENST00000321253 NEK4P51957 841 aa16.77■□□□□ 0.28
TUBA3D-201ENST00000321253 CHMP4BP1P59074 171 aa16.77■□□□□ 0.28
TUBA3D-201ENST00000321253 SP2Q02086 613 aa16.77■□□□□ 0.28
TUBA3D-201ENST00000321253 MCTP2Q6DN12 878 aa16.77■□□□□ 0.28
TUBA3D-201ENST00000321253 GPRASP2Q96D09 838 aa16.77■□□□□ 0.28
TUBA3D-201ENST00000321253 PGBD1Q96JS3 809 aa16.77■□□□□ 0.28
TUBA3D-201ENST00000321253 ANO3Q9BYT9 981 aa16.77■□□□□ 0.28
TUBA3D-201ENST00000321253 ZMYND12Q9H0C1 365 aa16.77■□□□□ 0.28
TUBA3D-201ENST00000321253 TPCN1Q9ULQ1 816 aa16.77■□□□□ 0.28
TUBA3D-201ENST00000321253 MYH7BA7E2Y1 1941 aa16.77■□□□□ 0.27
TUBA3D-201ENST00000321253 LTBP2Q14767 1821 aa16.76■□□□□ 0.27
TUBA3D-201ENST00000321253 NOP56O00567 594 aaKnown RBP16.76■□□□□ 0.27
TUBA3D-201ENST00000321253 NBPF20Q3BBV1 942 aa16.76■□□□□ 0.27
TUBA3D-201ENST00000321253 REXO1Q8N1G1 1221 aaKnown RBP16.76■□□□□ 0.27
TUBA3D-201ENST00000321253 BICD2Q8TD16 824 aa16.76■□□□□ 0.27
TUBA3D-201ENST00000321253 BADQ92934 168 aa16.76■□□□□ 0.27
TUBA3D-201ENST00000321253 TMEM260Q9NX78 707 aa16.76■□□□□ 0.27
TUBA3D-201ENST00000321253 TBX21Q9UL17 535 aa16.76■□□□□ 0.27
TUBA3D-201ENST00000321253 RANBP2P49792 3224 aaKnown RBP16.76■□□□□ 0.27
TUBA3D-201ENST00000321253 PFKFB2O60825 505 aa16.75■□□□□ 0.27
TUBA3D-201ENST00000321253 PPFIA4O75335 1185 aa16.75■□□□□ 0.27
TUBA3D-201ENST00000321253 DEXIO95424 95 aa16.75■□□□□ 0.27
TUBA3D-201ENST00000321253 CD4P01730 458 aa16.75■□□□□ 0.27
TUBA3D-201ENST00000321253 ITGB5P18084 799 aa16.75■□□□□ 0.27
TUBA3D-201ENST00000321253 CLK2P49760 499 aaKnown RBP16.75■□□□□ 0.27
TUBA3D-201ENST00000321253 SCRN1Q12765 414 aa16.75■□□□□ 0.27
TUBA3D-201ENST00000321253 SEMA3FQ13275 785 aa16.75■□□□□ 0.27
TUBA3D-201ENST00000321253 MTMR1Q13613 665 aa16.75■□□□□ 0.27
TUBA3D-201ENST00000321253 HSDL1Q3SXM5 330 aa16.75■□□□□ 0.27
TUBA3D-201ENST00000321253 JAKMIP3Q5VZ66 844 aa16.75■□□□□ 0.27
TUBA3D-201ENST00000321253 NFRKBQ6P4R8 1299 aa16.75■□□□□ 0.27
TUBA3D-201ENST00000321253 METTL7BQ6UX53 244 aa16.75■□□□□ 0.27
TUBA3D-201ENST00000321253 CYFIP1Q7L576 1253 aa16.75■□□□□ 0.27
TUBA3D-201ENST00000321253 GIMAP8Q8ND71 665 aaPredicted RBP16.75■□□□□ 0.27
TUBA3D-201ENST00000321253 KATNAL1Q9BW62 490 aa16.75■□□□□ 0.27
TUBA3D-201ENST00000321253 SH3GLB2Q9NR46 395 aa16.75■□□□□ 0.27
TUBA3D-201ENST00000321253 VPS54Q9P1Q0 977 aa16.75■□□□□ 0.27
TUBA3D-201ENST00000321253 UBIAD1Q9Y5Z9 338 aa16.75■□□□□ 0.27
TUBA3D-201ENST00000321253 SCN10AQ9Y5Y9 1956 aa16.75■□□□□ 0.27
TUBA3D-201ENST00000321253 B4GALT4O60513 344 aa16.75■□□□□ 0.27
TUBA3D-201ENST00000321253 SLC34A2O95436 690 aa16.75■□□□□ 0.27
TUBA3D-201ENST00000321253 SUPT20HL2P0C7V6 817 aa16.75■□□□□ 0.27
TUBA3D-201ENST00000321253 ZNF286BP0CG31 522 aa16.75■□□□□ 0.27
TUBA3D-201ENST00000321253 SENP7Q9BQF6 1050 aa16.75■□□□□ 0.27
TUBA3D-201ENST00000321253 TRPV6Q9H1D0 765 aa16.75■□□□□ 0.27
TUBA3D-201ENST00000321253 JADE2Q9NQC1 790 aa16.75■□□□□ 0.27
TUBA3D-201ENST00000321253 MAFGO15525 162 aa16.74■□□□□ 0.27
TUBA3D-201ENST00000321253 TIMP1P01033 207 aa16.74■□□□□ 0.27
TUBA3D-201ENST00000321253 ITGB8P26012 769 aa16.74■□□□□ 0.27
TUBA3D-201ENST00000321253 ZNF76P36508 570 aa16.74■□□□□ 0.27
TUBA3D-201ENST00000321253 SREBF1P36956 1147 aa16.74■□□□□ 0.27
TUBA3D-201ENST00000321253 NLRP5P59047 1200 aa16.74■□□□□ 0.27
TUBA3D-201ENST00000321253 PTPN11Q06124 597 aaPredicted RBP16.74■□□□□ 0.27
TUBA3D-201ENST00000321253 TDHQ8IZJ6 230 aa16.74■□□□□ 0.27
TUBA3D-201ENST00000321253 MXRA8Q9BRK3 442 aa16.74■□□□□ 0.27
TUBA3D-201ENST00000321253 PPP1R12CQ9BZL4 782 aa16.74■□□□□ 0.27
TUBA3D-201ENST00000321253 UPF2Q9HAU5 1272 aaKnown RBP16.74■□□□□ 0.27
TUBA3D-201ENST00000321253 F2P00734 622 aa16.73■□□□□ 0.27
TUBA3D-201ENST00000321253 HOXD8P13378 290 aaPredicted RBP16.73■□□□□ 0.27
TUBA3D-201ENST00000321253 PSEN2P49810 448 aa16.73■□□□□ 0.27
TUBA3D-201ENST00000321253 ARHGAP4P98171 946 aa16.73■□□□□ 0.27
TUBA3D-201ENST00000321253 FPGSQ05932 587 aa16.73■□□□□ 0.27
TUBA3D-201ENST00000321253 KAT2BQ92831 832 aa16.73■□□□□ 0.27
TUBA3D-201ENST00000321253 C22orf23Q9BZE7 217 aa16.73■□□□□ 0.27
TUBA3D-201ENST00000321253 HIPK3Q9H422 1215 aa16.73■□□□□ 0.27
TUBA3D-201ENST00000321253 TRMT13Q9NUP7 481 aaKnown RBP16.73■□□□□ 0.27
TUBA3D-201ENST00000321253 PKD2L1Q9P0L9 805 aa16.73■□□□□ 0.27
TUBA3D-201ENST00000321253 NOD1Q9Y239 953 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms