RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 NHEJ1Q9H9Q4 299 aaPredicted RBP18.22■□□□□ 0.51
SMCHD1-201ENST00000320876 ARHGEF10O15013 1369 aa18.22■□□□□ 0.51
SMCHD1-201ENST00000320876 HDAC4P56524 1084 aa18.22■□□□□ 0.51
SMCHD1-201ENST00000320876 SHANK2Q9UPX8 1470 aa18.22■□□□□ 0.51
SMCHD1-201ENST00000320876 ATP10DQ9P241 1426 aa18.22■□□□□ 0.51
SMCHD1-201ENST00000320876 OCRLQ01968 901 aa18.21■□□□□ 0.51
SMCHD1-201ENST00000320876 CHURC1Q8WUH1 139 aa18.21■□□□□ 0.51
SMCHD1-201ENST00000320876 CALR3Q96L12 384 aaKnown RBP18.21■□□□□ 0.51
SMCHD1-201ENST00000320876 TMEM232C9JQI7 657 aa18.21■□□□□ 0.51
SMCHD1-201ENST00000320876 MED7O43513 233 aa18.21■□□□□ 0.51
SMCHD1-201ENST00000320876 GAP43P17677 238 aa18.21■□□□□ 0.51
SMCHD1-201ENST00000320876 PSMC2P35998 433 aaKnown RBP18.21■□□□□ 0.51
SMCHD1-201ENST00000320876 TSTA3Q13630 321 aaPredicted RBP18.21■□□□□ 0.51
SMCHD1-201ENST00000320876 CENPUQ71F23 418 aa18.21■□□□□ 0.51
SMCHD1-201ENST00000320876 NT5C1BQ96P26 610 aa18.21■□□□□ 0.51
SMCHD1-201ENST00000320876 SATB2Q9UPW6 733 aa18.21■□□□□ 0.51
SMCHD1-201ENST00000320876 PNMA6AP0CW24 399 aaPredicted RBP18.21■□□□□ 0.51
SMCHD1-201ENST00000320876 CXCR5P32302 372 aa18.21■□□□□ 0.51
SMCHD1-201ENST00000320876 SPARCL1Q14515 664 aa18.21■□□□□ 0.51
SMCHD1-201ENST00000320876 SPOPLQ6IQ16 392 aa18.21■□□□□ 0.51
SMCHD1-201ENST00000320876 TMCO5AQ8N6Q1 288 aa18.21■□□□□ 0.51
SMCHD1-201ENST00000320876 ZNF594Q96JF6 807 aaPredicted RBP18.21■□□□□ 0.51
SMCHD1-201ENST00000320876 TESPA1A2RU30 521 aaPredicted RBP18.21■□□□□ 0.51
SMCHD1-201ENST00000320876 XKR9Q5GH70 373 aa18.21■□□□□ 0.51
SMCHD1-201ENST00000320876 FSCBQ5H9T9 825 aa18.21■□□□□ 0.51
SMCHD1-201ENST00000320876 TEKT3Q9BXF9 490 aa18.21■□□□□ 0.51
SMCHD1-201ENST00000320876 STOML1Q9UBI4 398 aa18.21■□□□□ 0.51
SMCHD1-201ENST00000320876 NPC1L1Q9UHC9 1359 aa18.21■□□□□ 0.51
SMCHD1-201ENST00000320876 ARHGAP10A1A4S6 786 aa18.21■□□□□ 0.51
SMCHD1-201ENST00000320876 NUDCD1Q96RS6 583 aa18.21■□□□□ 0.51
SMCHD1-201ENST00000320876 HINFPQ9BQA5 517 aa18.21■□□□□ 0.51
SMCHD1-201ENST00000320876 SLC5A4Q9NY91 659 aa18.21■□□□□ 0.51
SMCHD1-201ENST00000320876 ABCC2Q92887 1545 aa18.21■□□□□ 0.51
SMCHD1-201ENST00000320876 KRT39Q6A163 491 aa18.21■□□□□ 0.51
SMCHD1-201ENST00000320876 LARP4BQ92615 738 aaKnown RBP18.21■□□□□ 0.51
SMCHD1-201ENST00000320876 CHUKO15111 745 aa18.21■□□□□ 0.5
SMCHD1-201ENST00000320876 SERPINB10P48595 397 aa18.21■□□□□ 0.5
SMCHD1-201ENST00000320876 SESTD1Q86VW0 696 aa18.21■□□□□ 0.5
SMCHD1-201ENST00000320876 DHX38Q92620 1227 aaKnown RBP18.21■□□□□ 0.5
SMCHD1-201ENST00000320876 DMRT2Q9Y5R5 561 aa18.21■□□□□ 0.5
SMCHD1-201ENST00000320876 SHROOM2Q13796 1616 aa18.2■□□□□ 0.5
SMCHD1-201ENST00000320876 KRT4P19013 534 aa18.2■□□□□ 0.5
SMCHD1-201ENST00000320876 POLD1P28340 1107 aa18.2■□□□□ 0.5
SMCHD1-201ENST00000320876 NOP14P78316 857 aaKnown RBP18.2■□□□□ 0.5
SMCHD1-201ENST00000320876 FAM26FQ5R3K3 315 aa18.2■□□□□ 0.5
SMCHD1-201ENST00000320876 SPOUT1Q5T280 376 aaKnown RBP18.2■□□□□ 0.5
SMCHD1-201ENST00000320876 FANCBQ8NB91 859 aa18.2■□□□□ 0.5
SMCHD1-201ENST00000320876 CFAP36Q96G28 342 aa18.2■□□□□ 0.5
SMCHD1-201ENST00000320876 TFCP2L1Q9NZI6 479 aa18.2■□□□□ 0.5
SMCHD1-201ENST00000320876 A2MP01023 1474 aa18.2■□□□□ 0.5
SMCHD1-201ENST00000320876 POLR2MP0CAP2 368 aa18.2■□□□□ 0.5
SMCHD1-201ENST00000320876 THOC5Q13769 683 aaKnown RBP18.2■□□□□ 0.5
SMCHD1-201ENST00000320876 ICA1LQ8NDH6 482 aa18.2■□□□□ 0.5
SMCHD1-201ENST00000320876 SERPING1P05155 500 aa18.2■□□□□ 0.5
SMCHD1-201ENST00000320876 ADCY1Q08828 1119 aa18.2■□□□□ 0.5
SMCHD1-201ENST00000320876 CYTH2Q99418 400 aa18.2■□□□□ 0.5
SMCHD1-201ENST00000320876 ZNF233A6NK53 670 aa18.2■□□□□ 0.5
SMCHD1-201ENST00000320876 SLCO1A2P46721 670 aa18.2■□□□□ 0.5
SMCHD1-201ENST00000320876 MAN2A1Q16706 1144 aa18.2■□□□□ 0.5
SMCHD1-201ENST00000320876 KIF17Q9P2E2 1029 aa18.2■□□□□ 0.5
SMCHD1-201ENST00000320876 TMEM247A6NEH6 219 aa18.2■□□□□ 0.5
SMCHD1-201ENST00000320876 IFRD2Q12894 506 aaPredicted RBP18.2■□□□□ 0.5
SMCHD1-201ENST00000320876 DARS2Q6PI48 645 aaKnown RBP18.2■□□□□ 0.5
SMCHD1-201ENST00000320876 TAB3Q8N5C8 712 aaPredicted RBP18.2■□□□□ 0.5
SMCHD1-201ENST00000320876 ANKRD36BP1Q96IX9 119 aa18.2■□□□□ 0.5
SMCHD1-201ENST00000320876 OLA1Q9NTK5 396 aaKnown RBP18.2■□□□□ 0.5
SMCHD1-201ENST00000320876 HNRNPDLO14979 420 aaKnown RBP18.2■□□□□ 0.5
SMCHD1-201ENST00000320876 TMEM259Q4ZIN3 620 aa18.2■□□□□ 0.5
SMCHD1-201ENST00000320876 ZNF658Q5TYW1 1059 aaPredicted RBP18.2■□□□□ 0.5
SMCHD1-201ENST00000320876 NSMFQ6X4W1 530 aa18.2■□□□□ 0.5
SMCHD1-201ENST00000320876 CLIC4Q9Y696 253 aa18.2■□□□□ 0.5
SMCHD1-201ENST00000320876 SYNGAP1Q96PV0 1343 aa18.2■□□□□ 0.5
SMCHD1-201ENST00000320876 ATP2B4P23634 1241 aa18.2■□□□□ 0.5
SMCHD1-201ENST00000320876 BASP1P80723 227 aaKnown RBP18.2■□□□□ 0.5
SMCHD1-201ENST00000320876 MYLK4Q86YV6 388 aaPredicted RBP18.2■□□□□ 0.5
SMCHD1-201ENST00000320876 FAM96AQ9H5X1 160 aa18.2■□□□□ 0.5
SMCHD1-201ENST00000320876 NRBP1Q9UHY1 535 aa18.2■□□□□ 0.5
SMCHD1-201ENST00000320876 SOWAHDA6NJG2 315 aa18.19■□□□□ 0.5
SMCHD1-201ENST00000320876 KIAA0232Q92628 1395 aa18.19■□□□□ 0.5
SMCHD1-201ENST00000320876 SERPINB2P05120 415 aa18.19■□□□□ 0.5
SMCHD1-201ENST00000320876 TRIM60Q495X7 471 aa18.19■□□□□ 0.5
SMCHD1-201ENST00000320876 TEDDM1Q5T9Z0 273 aa18.19■□□□□ 0.5
SMCHD1-201ENST00000320876 ARHGAP18Q8N392 663 aa18.19■□□□□ 0.5
SMCHD1-201ENST00000320876 CCDC127Q96BQ5 260 aa18.19■□□□□ 0.5
SMCHD1-201ENST00000320876 LRRC37BQ96QE4 947 aa18.19■□□□□ 0.5
SMCHD1-201ENST00000320876 MRPL11Q9Y3B7 192 aaKnown RBP18.19■□□□□ 0.5
SMCHD1-201ENST00000320876 ABL1P00519 1130 aa18.19■□□□□ 0.5
SMCHD1-201ENST00000320876 KRT1P04264 644 aa18.19■□□□□ 0.5
SMCHD1-201ENST00000320876 PITPNM3Q9BZ71 974 aa18.19■□□□□ 0.5
SMCHD1-201ENST00000320876 SPDYE2BA6NHP3 402 aa18.19■□□□□ 0.5
SMCHD1-201ENST00000320876 PODXLO00592 558 aa18.19■□□□□ 0.5
SMCHD1-201ENST00000320876 SPDYE6P0CI01 402 aa18.19■□□□□ 0.5
SMCHD1-201ENST00000320876 PMLP29590 882 aa18.19■□□□□ 0.5
SMCHD1-201ENST00000320876 GCKRQ14397 625 aa18.19■□□□□ 0.5
SMCHD1-201ENST00000320876 KIF19Q2TAC6 998 aa18.19■□□□□ 0.5
SMCHD1-201ENST00000320876 GJA10Q969M2 543 aa18.19■□□□□ 0.5
SMCHD1-201ENST00000320876 TRIM55Q9BYV6 548 aa18.19■□□□□ 0.5
SMCHD1-201ENST00000320876 DIS3Q9Y2L1 958 aaKnown RBP18.19■□□□□ 0.5
SMCHD1-201ENST00000320876 PDHA1P08559 390 aa18.19■□□□□ 0.5
SMCHD1-201ENST00000320876 SH3GL3Q99963 347 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms