RNA–Protein interactions for RNA: ENST00000318129.5

GINS3-201, Transcript of GINS complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GINS3, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-201ENST00000318129 EHMT1Q9H9B1 1298 aa11.42□□□□□ -0.58
GINS3-201ENST00000318129 TMEM260Q9NX78 707 aa11.42□□□□□ -0.58
GINS3-201ENST00000318129 PCDHB6Q9Y5E3 794 aa11.42□□□□□ -0.58
GINS3-201ENST00000318129 TLL2Q9Y6L7 1015 aa11.42□□□□□ -0.58
GINS3-201ENST00000318129 COPB2P35606 906 aa11.42□□□□□ -0.58
GINS3-201ENST00000318129 STAT3P40763 770 aa11.42□□□□□ -0.58
GINS3-201ENST00000318129 MAGEA9P43362 315 aa11.42□□□□□ -0.58
GINS3-201ENST00000318129 ME1P48163 572 aa11.42□□□□□ -0.58
GINS3-201ENST00000318129 TMEM132BQ14DG7 1078 aa11.42□□□□□ -0.58
GINS3-201ENST00000318129 NOM1Q5C9Z4 860 aaKnown RBP11.42□□□□□ -0.58
GINS3-201ENST00000318129 PACS2Q86VP3 889 aa11.42□□□□□ -0.58
GINS3-201ENST00000318129 TBCKQ8TEA7 893 aa11.42□□□□□ -0.58
GINS3-201ENST00000318129 FTOQ9C0B1 505 aaKnown RBP eCLIP11.42□□□□□ -0.58
GINS3-201ENST00000318129 ZNF214Q9UL59 606 aaPredicted RBP11.42□□□□□ -0.58
GINS3-201ENST00000318129 TMEM88BA6NKF7 163 aa11.41□□□□□ -0.58
GINS3-201ENST00000318129 OPLAHO14841 1288 aa11.41□□□□□ -0.58
GINS3-201ENST00000318129 NR1I2O75469 434 aa11.41□□□□□ -0.58
GINS3-201ENST00000318129 TADA3O75528 432 aa11.41□□□□□ -0.58
GINS3-201ENST00000318129 CFBP00751 764 aa11.41□□□□□ -0.58
GINS3-201ENST00000318129 ACTN2P35609 894 aa11.41□□□□□ -0.58
GINS3-201ENST00000318129 USP11P51784 963 aa11.41□□□□□ -0.58
GINS3-201ENST00000318129 GSDMDP57764 484 aa11.41□□□□□ -0.58
GINS3-201ENST00000318129 HERVK_113P62684 666 aa11.41□□□□□ -0.58
GINS3-201ENST00000318129 ZNF174Q15697 407 aa11.41□□□□□ -0.58
GINS3-201ENST00000318129 SNRNP48Q6IEG0 339 aaKnown RBP11.41□□□□□ -0.58
GINS3-201ENST00000318129 CLEC4DQ8WXI8 215 aa11.41□□□□□ -0.58
GINS3-201ENST00000318129 CCDC102AQ96A19 550 aa11.41□□□□□ -0.58
GINS3-201ENST00000318129 HHIPL1Q96JK4 782 aa11.41□□□□□ -0.58
GINS3-201ENST00000318129 ANO3Q9BYT9 981 aa11.41□□□□□ -0.58
GINS3-201ENST00000318129 ADAM21Q9UKJ8 722 aa11.41□□□□□ -0.58
GINS3-201ENST00000318129 SMCHD1A6NHR9 2005 aa11.41□□□□□ -0.58
GINS3-201ENST00000318129 TESPA1A2RU30 521 aaPredicted RBP11.4□□□□□ -0.58
GINS3-201ENST00000318129 MANSC4A6NHS7 340 aaPredicted RBP11.4□□□□□ -0.58
GINS3-201ENST00000318129 LAD1O00515 517 aa11.4□□□□□ -0.58
GINS3-201ENST00000318129 YY1P25490 414 aa11.4□□□□□ -0.58
GINS3-201ENST00000318129 HSD17B4P51659 736 aa11.4□□□□□ -0.58
GINS3-201ENST00000318129 TTC31Q49AM3 519 aaPredicted RBP11.4□□□□□ -0.58
GINS3-201ENST00000318129 ADALQ6DHV7 355 aa11.4□□□□□ -0.58
GINS3-201ENST00000318129 CC2D1AQ6P1N0 951 aaPredicted RBP11.4□□□□□ -0.58
GINS3-201ENST00000318129 RASAL3Q86YV0 1011 aa11.4□□□□□ -0.58
GINS3-201ENST00000318129 RIOX2Q8IUF8 465 aa11.4□□□□□ -0.58
GINS3-201ENST00000318129 CHST13Q8NET6 341 aa11.4□□□□□ -0.58
GINS3-201ENST00000318129 BRI3BPQ8WY22 251 aa11.4□□□□□ -0.58
GINS3-201ENST00000318129 RNF146Q9NTX7 359 aa11.4□□□□□ -0.58
GINS3-201ENST00000318129 RABGAP1Q9Y3P9 1069 aa11.4□□□□□ -0.58
GINS3-201ENST00000318129 A0A1W2PQ27 194 aa11.4□□□□□ -0.58
GINS3-201ENST00000318129 A0A1W2PQ64 194 aa11.4□□□□□ -0.58
GINS3-201ENST00000318129 A0A1W2PQD8 194 aa11.4□□□□□ -0.58
GINS3-201ENST00000318129 MYCNP04198 464 aaPredicted RBP11.4□□□□□ -0.58
GINS3-201ENST00000318129 TPM1P09493 284 aa11.4□□□□□ -0.58
GINS3-201ENST00000318129 PRR29P0C7W0 189 aa11.4□□□□□ -0.58
GINS3-201ENST00000318129 GCFC2P16383 781 aaKnown RBP11.4□□□□□ -0.58
GINS3-201ENST00000318129 KCNJ6P48051 423 aa11.4□□□□□ -0.58
GINS3-201ENST00000318129 INHBEP58166 350 aa11.4□□□□□ -0.58
GINS3-201ENST00000318129 PLS1Q14651 629 aa11.4□□□□□ -0.58
GINS3-201ENST00000318129 C11orf57Q6ZUT1 292 aaPredicted RBP11.4□□□□□ -0.58
GINS3-201ENST00000318129 KRI1Q8N9T8 703 aaKnown RBP11.4□□□□□ -0.58
GINS3-201ENST00000318129 FERMT2Q96AC1 680 aa11.4□□□□□ -0.58
GINS3-201ENST00000318129 FBXO40Q9UH90 709 aa11.4□□□□□ -0.58
GINS3-201ENST00000318129 PCDHA7Q9UN72 937 aa11.4□□□□□ -0.58
GINS3-201ENST00000318129 COL11A1P12107 1806 aaPredicted RBP11.4□□□□□ -0.58
GINS3-201ENST00000318129 LAMA3Q16787 3333 aa11.4□□□□□ -0.59
GINS3-201ENST00000318129 BTBD19C9JJ37 291 aa11.39□□□□□ -0.59
GINS3-201ENST00000318129 PDHXO00330 501 aa11.39□□□□□ -0.59
GINS3-201ENST00000318129 CUTAO60888 179 aa11.39□□□□□ -0.59
GINS3-201ENST00000318129 SLC25A27O95847 323 aa11.39□□□□□ -0.59
GINS3-201ENST00000318129 TAL1P17542 331 aaPredicted RBP11.39□□□□□ -0.59
GINS3-201ENST00000318129 HOXA13P31271 388 aaPredicted RBP11.39□□□□□ -0.59
GINS3-201ENST00000318129 MCM7P33993 719 aa11.39□□□□□ -0.59
GINS3-201ENST00000318129 SREBF1P36956 1147 aa11.39□□□□□ -0.59
GINS3-201ENST00000318129 LMAN1P49257 510 aa11.39□□□□□ -0.59
GINS3-201ENST00000318129 ATP2C1P98194 919 aaPredicted RBP11.39□□□□□ -0.59
GINS3-201ENST00000318129 MKRN3Q13064 507 aaKnown RBP11.39□□□□□ -0.59
GINS3-201ENST00000318129 LETM2Q2VYF4 491 aa11.39□□□□□ -0.59
GINS3-201ENST00000318129 ARL6IP4Q66PJ3 421 aaKnown RBP11.39□□□□□ -0.59
GINS3-201ENST00000318129 PPP4R3AQ6IN85 833 aa11.39□□□□□ -0.59
GINS3-201ENST00000318129 MOXD1Q6UVY6 613 aa11.39□□□□□ -0.59
GINS3-201ENST00000318129 PGBD1Q96JS3 809 aa11.39□□□□□ -0.59
GINS3-201ENST00000318129 ACAD9Q9H845 621 aa11.39□□□□□ -0.59
GINS3-201ENST00000318129 EFCAB8A8MWE9 144 aa11.39□□□□□ -0.59
GINS3-201ENST00000318129 CCNT1O60563 726 aaKnown RBP11.39□□□□□ -0.59
GINS3-201ENST00000318129 IVLP07476 585 aa11.39□□□□□ -0.59
GINS3-201ENST00000318129 SLC10A3P09131 477 aa11.39□□□□□ -0.59
GINS3-201ENST00000318129 MARCKSP29966 332 aaPredicted RBP11.39□□□□□ -0.59
GINS3-201ENST00000318129 GCLCP48506 637 aaPredicted RBP11.39□□□□□ -0.59
GINS3-201ENST00000318129 PTGDRQ13258 359 aa11.39□□□□□ -0.59
GINS3-201ENST00000318129 ZNF579Q8NAF0 562 aaKnown RBP11.39□□□□□ -0.59
GINS3-201ENST00000318129 TBC1D5Q92609 795 aa11.39□□□□□ -0.59
GINS3-201ENST00000318129 DRC1Q96MC2 740 aa11.39□□□□□ -0.59
GINS3-201ENST00000318129 SRRTQ9BXP5 876 aaKnown RBP11.39□□□□□ -0.59
GINS3-201ENST00000318129 SPATC1LQ9H0A9 340 aa11.39□□□□□ -0.59
GINS3-201ENST00000318129 HOMER2Q9NSB8 354 aa11.39□□□□□ -0.59
GINS3-201ENST00000318129 ABT1Q9ULW3 272 aaKnown RBP11.39□□□□□ -0.59
GINS3-201ENST00000318129 SRPRBQ9Y5M8 271 aaKnown RBP11.39□□□□□ -0.59
GINS3-201ENST00000318129 A0A0G2JMZ2 1700 aa11.39□□□□□ -0.59
GINS3-201ENST00000318129 PHLPP2Q6ZVD8 1323 aa11.38□□□□□ -0.59
GINS3-201ENST00000318129 CYP3A7-CYP3A51PA0A087WV96 503 aa11.38□□□□□ -0.59
GINS3-201ENST00000318129 NFIBO00712 420 aa11.38□□□□□ -0.59
GINS3-201ENST00000318129 CYP3A4P08684 503 aa11.38□□□□□ -0.59
GINS3-201ENST00000318129 PTPREP23469 700 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms