RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 ARFGEF3Q5TH69 2177 aa4.9□□□□□ -1.63
CNOT1-201ENST00000317147 KRIT1O00522 736 aa4.9□□□□□ -1.63
CNOT1-201ENST00000317147 RAD21O60216 631 aa4.9□□□□□ -1.63
CNOT1-201ENST00000317147 CLASP2O75122 1294 aaKnown RBP4.9□□□□□ -1.63
CNOT1-201ENST00000317147 CUL4BQ13620 913 aa4.9□□□□□ -1.63
CNOT1-201ENST00000317147 ARID5BQ14865 1188 aa4.9□□□□□ -1.63
CNOT1-201ENST00000317147 ATG16L1Q676U5 607 aa4.9□□□□□ -1.63
CNOT1-201ENST00000317147 MMGT1Q8N4V1 131 aa4.9□□□□□ -1.63
CNOT1-201ENST00000317147 SLC26A6Q9BXS9 759 aa4.9□□□□□ -1.63
CNOT1-201ENST00000317147 RNF26Q9BY78 433 aaPredicted RBP4.9□□□□□ -1.63
CNOT1-201ENST00000317147 MMADHCQ9H3L0 296 aaPredicted RBP4.9□□□□□ -1.63
CNOT1-201ENST00000317147 STK17AQ9UEE5 414 aa4.9□□□□□ -1.63
CNOT1-201ENST00000317147 CORO1CQ9ULV4 474 aaPredicted RBP4.9□□□□□ -1.63
CNOT1-201ENST00000317147 LRCH1Q9Y2L9 728 aa4.9□□□□□ -1.63
CNOT1-201ENST00000317147 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.9□□□□□ -1.63
CNOT1-201ENST00000317147 JAK2O60674 1132 aa4.9□□□□□ -1.63
CNOT1-201ENST00000317147 ROR2Q01974 943 aaKnown RBP4.9□□□□□ -1.63
CNOT1-201ENST00000317147 ALCAMQ13740 583 aa4.9□□□□□ -1.63
CNOT1-201ENST00000317147 CRNKL1Q9BZJ0 848 aaKnown RBP4.9□□□□□ -1.63
CNOT1-201ENST00000317147 ABCB6Q9NP58 842 aa4.9□□□□□ -1.63
CNOT1-201ENST00000317147 PPANQ9NQ55 473 aaKnown RBP4.9□□□□□ -1.63
CNOT1-201ENST00000317147 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.9□□□□□ -1.63
CNOT1-201ENST00000317147 ARL2BPQ9Y2Y0 163 aa4.9□□□□□ -1.63
CNOT1-201ENST00000317147 SCN3AQ9NY46 2000 aa4.9□□□□□ -1.63
CNOT1-201ENST00000317147 PNPLA6Q8IY17 1366 aa4.9□□□□□ -1.63
CNOT1-201ENST00000317147 LMO7Q8WWI1 1683 aa4.89□□□□□ -1.63
CNOT1-201ENST00000317147 FAM187AA6NFU0 413 aa4.89□□□□□ -1.63
CNOT1-201ENST00000317147 PPIP5K2O43314 1243 aa4.89□□□□□ -1.63
CNOT1-201ENST00000317147 OPHN1O60890 802 aa4.89□□□□□ -1.63
CNOT1-201ENST00000317147 PLCB3Q01970 1234 aa4.89□□□□□ -1.63
CNOT1-201ENST00000317147 RESP18Q5W5W9 173 aa4.89□□□□□ -1.63
CNOT1-201ENST00000317147 NELFBQ8WX92 580 aa4.89□□□□□ -1.63
CNOT1-201ENST00000317147 ROPN1BQ9BZX4 212 aaPredicted RBP4.89□□□□□ -1.63
CNOT1-201ENST00000317147 TAF1DQ9H5J8 278 aaPredicted RBP4.89□□□□□ -1.63
CNOT1-201ENST00000317147 ROPN1Q9HAT0 212 aaPredicted RBP4.89□□□□□ -1.63
CNOT1-201ENST00000317147 CLTCQ00610 1675 aaKnown RBP4.89□□□□□ -1.63
CNOT1-201ENST00000317147 DOCK5Q9H7D0 1870 aa4.89□□□□□ -1.63
CNOT1-201ENST00000317147 ANKARQ7Z5J8 1434 aa4.89□□□□□ -1.63
CNOT1-201ENST00000317147 POTEB3A0JP26 581 aa4.89□□□□□ -1.63
CNOT1-201ENST00000317147 KRT15P19012 456 aa4.89□□□□□ -1.63
CNOT1-201ENST00000317147 HDAC4P56524 1084 aa4.89□□□□□ -1.63
CNOT1-201ENST00000317147 RARS2Q5T160 578 aaKnown RBP4.89□□□□□ -1.63
CNOT1-201ENST00000317147 NCAPH2Q6IBW4 605 aa4.89□□□□□ -1.63
CNOT1-201ENST00000317147 HIBCHQ6NVY1 386 aaPredicted RBP4.89□□□□□ -1.63
CNOT1-201ENST00000317147 POTEBQ6S5H4 581 aa4.89□□□□□ -1.63
CNOT1-201ENST00000317147 CAVIN3Q969G5 261 aa4.89□□□□□ -1.63
CNOT1-201ENST00000317147 NUDT16Q96DE0 195 aaKnown RBP4.89□□□□□ -1.63
CNOT1-201ENST00000317147 IMPG2Q9BZV3 1241 aa4.89□□□□□ -1.63
CNOT1-201ENST00000317147 SETD1AO15047 1707 aaKnown RBP4.89□□□□□ -1.63
CNOT1-201ENST00000317147 CADP27708 2225 aa4.89□□□□□ -1.63
CNOT1-201ENST00000317147 A0A1W2PQJ5 194 aa4.89□□□□□ -1.63
CNOT1-201ENST00000317147 HEXIM1O94992 359 aaKnown RBP4.89□□□□□ -1.63
CNOT1-201ENST00000317147 ACTN3Q08043 901 aaPredicted RBP4.89□□□□□ -1.63
CNOT1-201ENST00000317147 DNAL1Q4LDG9 190 aa4.89□□□□□ -1.63
CNOT1-201ENST00000317147 LINC00301Q8NCQ3 95 aa4.89□□□□□ -1.63
CNOT1-201ENST00000317147 SEPT8Q92599 483 aa4.89□□□□□ -1.63
CNOT1-201ENST00000317147 APPBP2Q92624 585 aa4.89□□□□□ -1.63
CNOT1-201ENST00000317147 FAM227BQ96M60 508 aa4.89□□□□□ -1.63
CNOT1-201ENST00000317147 KCNK9Q9NPC2 374 aa4.89□□□□□ -1.63
CNOT1-201ENST00000317147 AIPL1Q9NZN9 384 aa4.89□□□□□ -1.63
CNOT1-201ENST00000317147 DDAH1O94760 285 aa4.89□□□□□ -1.63
CNOT1-201ENST00000317147 PYGBP11216 843 aa4.89□□□□□ -1.63
CNOT1-201ENST00000317147 HOXB6P17509 224 aaKnown RBP4.89□□□□□ -1.63
CNOT1-201ENST00000317147 KRT4P19013 534 aa4.89□□□□□ -1.63
CNOT1-201ENST00000317147 LIFRP42702 1097 aa4.89□□□□□ -1.63
CNOT1-201ENST00000317147 ACADVLP49748 655 aa4.89□□□□□ -1.63
CNOT1-201ENST00000317147 KPNA2P52292 529 aaKnown RBP4.89□□□□□ -1.63
CNOT1-201ENST00000317147 GRM1Q13255 1194 aa4.89□□□□□ -1.63
CNOT1-201ENST00000317147 IFIT1BQ5T764 474 aaKnown RBP4.89□□□□□ -1.63
CNOT1-201ENST00000317147 BTNL9Q6UXG8 535 aa4.89□□□□□ -1.63
CNOT1-201ENST00000317147 TRMT10CQ7L0Y3 403 aaKnown RBP4.89□□□□□ -1.63
CNOT1-201ENST00000317147 RSRC2Q7L4I2 434 aaKnown RBP4.89□□□□□ -1.63
CNOT1-201ENST00000317147 SDCCAG3Q96C92 435 aa4.89□□□□□ -1.63
CNOT1-201ENST00000317147 KAT14Q9H8E8 782 aa4.89□□□□□ -1.63
CNOT1-201ENST00000317147 SH3GLB2Q9NR46 395 aa4.89□□□□□ -1.63
CNOT1-201ENST00000317147 GIMAP4Q9NUV9 329 aa4.89□□□□□ -1.63
CNOT1-201ENST00000317147 AATFQ9NY61 560 aaKnown RBP eCLIP4.89□□□□□ -1.631e-323■□□□□ 8.6
CNOT1-201ENST00000317147 POLR2DO15514 142 aaKnown RBP4.89□□□□□ -1.63
CNOT1-201ENST00000317147 ASAP2O43150 1006 aa4.89□□□□□ -1.63
CNOT1-201ENST00000317147 TTKP33981 857 aa4.89□□□□□ -1.63
CNOT1-201ENST00000317147 AP1B1Q10567 949 aa4.89□□□□□ -1.63
CNOT1-201ENST00000317147 E2F4Q16254 413 aa4.89□□□□□ -1.63
CNOT1-201ENST00000317147 ADCK5Q3MIX3 580 aa4.89□□□□□ -1.63
CNOT1-201ENST00000317147 TMTC3Q6ZXV5 915 aa4.89□□□□□ -1.63
CNOT1-201ENST00000317147 ANO5Q75V66 913 aa4.89□□□□□ -1.63
CNOT1-201ENST00000317147 TEKT1Q969V4 418 aa4.89□□□□□ -1.63
CNOT1-201ENST00000317147 CENPTQ96BT3 561 aa4.89□□□□□ -1.63
CNOT1-201ENST00000317147 TIMMDC1Q9NPL8 285 aa4.89□□□□□ -1.63
CNOT1-201ENST00000317147 EXOC7Q9UPT5 735 aa4.89□□□□□ -1.63
CNOT1-201ENST00000317147 CTNND2Q9UQB3 1225 aa4.89□□□□□ -1.63
CNOT1-201ENST00000317147 PARP3Q9Y6F1 533 aa4.89□□□□□ -1.63
CNOT1-201ENST00000317147 NBASA2RRP1 2371 aa4.89□□□□□ -1.63
CNOT1-201ENST00000317147 BRCA2P51587 3418 aa4.89□□□□□ -1.63
CNOT1-201ENST00000317147 MTCL1Q9Y4B5 1905 aaKnown RBP4.89□□□□□ -1.63
CNOT1-201ENST00000317147 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.89□□□□□ -1.636e-7■■■■■ 29
CNOT1-201ENST00000317147 SPAG7O75391 227 aa4.89□□□□□ -1.63
CNOT1-201ENST00000317147 ZRANB2O95218 330 aaKnown RBP eCLIP4.89□□□□□ -1.631e-6■■■□□ 17.1
CNOT1-201ENST00000317147 MMEP08473 750 aa4.89□□□□□ -1.63
CNOT1-201ENST00000317147 BPIFB4P59827 614 aa4.89□□□□□ -1.63
CNOT1-201ENST00000317147 HAND2P61296 217 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms