RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 LIG3P49916 1009 aa19.08■□□□□ 0.64
SCAMP4-201ENST00000316097 C2orf54Q08AI8 447 aa19.08■□□□□ 0.64
SCAMP4-201ENST00000316097 INF2Q27J81 1249 aa19.08■□□□□ 0.64
SCAMP4-201ENST00000316097 ADGRF4Q8IZF3 695 aa19.08■□□□□ 0.64
SCAMP4-201ENST00000316097 LZTS2Q9BRK4 669 aa19.08■□□□□ 0.64
SCAMP4-201ENST00000316097 SEC63Q9UGP8 760 aaKnown RBP19.08■□□□□ 0.64
SCAMP4-201ENST00000316097 TRIM49BA6NDI0 452 aa19.07■□□□□ 0.64
SCAMP4-201ENST00000316097 BMP15O95972 392 aa19.07■□□□□ 0.64
SCAMP4-201ENST00000316097 PTGER2P43116 358 aa19.07■□□□□ 0.64
SCAMP4-201ENST00000316097 IRAK1P51617 712 aa19.07■□□□□ 0.64
SCAMP4-201ENST00000316097 SNAP25P60880 206 aa19.07■□□□□ 0.64
SCAMP4-201ENST00000316097 ZNF543Q08ER8 600 aa19.07■□□□□ 0.64
SCAMP4-201ENST00000316097 ABCB5Q2M3G0 1257 aa19.07■□□□□ 0.64
SCAMP4-201ENST00000316097 WDR59Q6PJI9 974 aa19.07■□□□□ 0.64
SCAMP4-201ENST00000316097 MB21D1Q8N884 522 aa19.07■□□□□ 0.64
SCAMP4-201ENST00000316097 UPF1Q92900 1129 aaKnown RBP eCLIP19.07■□□□□ 0.641e-7■■■■■ 49.3
SCAMP4-201ENST00000316097 FAM107BQ9H098 131 aa19.07■□□□□ 0.64
SCAMP4-201ENST00000316097 SIPA1L1O43166 1804 aa19.07■□□□□ 0.64
SCAMP4-201ENST00000316097 USP17L10C9JJH3 530 aa19.07■□□□□ 0.64
SCAMP4-201ENST00000316097 KRT86O43790 486 aa19.07■□□□□ 0.64
SCAMP4-201ENST00000316097 ENTPD3O75355 529 aa19.07■□□□□ 0.64
SCAMP4-201ENST00000316097 SNHG28P0DPA3 235 aa19.07■□□□□ 0.64
SCAMP4-201ENST00000316097 ZNF658Q5TYW1 1059 aaPredicted RBP19.07■□□□□ 0.64
SCAMP4-201ENST00000316097 MMS22LQ6ZRQ5 1243 aa19.07■□□□□ 0.64
SCAMP4-201ENST00000316097 CCDC17Q96LX7 622 aa19.07■□□□□ 0.64
SCAMP4-201ENST00000316097 DNAJC7Q99615 494 aa19.07■□□□□ 0.64
SCAMP4-201ENST00000316097 RIOX1Q9H6W3 641 aa19.07■□□□□ 0.64
SCAMP4-201ENST00000316097 JMJD4Q9H9V9 463 aa19.07■□□□□ 0.64
SCAMP4-201ENST00000316097 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.07■□□□□ 0.64
SCAMP4-201ENST00000316097 TMOD2Q9NZR1 351 aa19.07■□□□□ 0.64
SCAMP4-201ENST00000316097 BIN2Q9UBW5 565 aaPredicted RBP19.07■□□□□ 0.64
SCAMP4-201ENST00000316097 MYO3BQ8WXR4 1341 aa19.06■□□□□ 0.64
SCAMP4-201ENST00000316097 M0R2N6 131 aa19.06■□□□□ 0.64
SCAMP4-201ENST00000316097 GTPBP6O43824 516 aaPredicted RBP19.06■□□□□ 0.64
SCAMP4-201ENST00000316097 ERLIN2O94905 339 aa19.06■□□□□ 0.64
SCAMP4-201ENST00000316097 PRCPP42785 496 aa19.06■□□□□ 0.64
SCAMP4-201ENST00000316097 CIAPIN1Q6FI81 312 aa19.06■□□□□ 0.64
SCAMP4-201ENST00000316097 PDXDC2PQ6P474 469 aa19.06■□□□□ 0.64
SCAMP4-201ENST00000316097 LACRTQ9GZZ8 138 aa19.06■□□□□ 0.64
SCAMP4-201ENST00000316097 SH3GLB2Q9NR46 395 aa19.06■□□□□ 0.64
SCAMP4-201ENST00000316097 TMEM260Q9NX78 707 aa19.06■□□□□ 0.64
SCAMP4-201ENST00000316097 RCCD1A6NED2 376 aa19.06■□□□□ 0.64
SCAMP4-201ENST00000316097 EBAG9O00559 213 aa19.06■□□□□ 0.64
SCAMP4-201ENST00000316097 WNT10BO00744 389 aa19.06■□□□□ 0.64
SCAMP4-201ENST00000316097 PPP1R11O60927 126 aaPredicted RBP19.06■□□□□ 0.64
SCAMP4-201ENST00000316097 CALML3P27482 149 aa19.06■□□□□ 0.64
SCAMP4-201ENST00000316097 KRT83P78385 493 aa19.06■□□□□ 0.64
SCAMP4-201ENST00000316097 ICA1Q05084 483 aa19.06■□□□□ 0.64
SCAMP4-201ENST00000316097 IL17AQ16552 155 aa19.06■□□□□ 0.64
SCAMP4-201ENST00000316097 SOGA3Q5TF21 947 aa19.06■□□□□ 0.64
SCAMP4-201ENST00000316097 IRF2BP1Q8IU81 584 aa19.06■□□□□ 0.64
SCAMP4-201ENST00000316097 SPICE1Q8N0Z3 855 aa19.06■□□□□ 0.64
SCAMP4-201ENST00000316097 EHBP1Q8NDI1 1231 aa19.06■□□□□ 0.64
SCAMP4-201ENST00000316097 JADE2Q9NQC1 790 aa19.06■□□□□ 0.64
SCAMP4-201ENST00000316097 FAM169AQ9Y6X4 670 aa19.06■□□□□ 0.64
SCAMP4-201ENST00000316097 CNTNAP1P78357 1384 aa19.05■□□□□ 0.64
SCAMP4-201ENST00000316097 CCDC194A0A1B0GVG4 234 aa19.05■□□□□ 0.64
SCAMP4-201ENST00000316097 SUGP1Q8IWZ8 645 aaKnown RBP19.05■□□□□ 0.64
SCAMP4-201ENST00000316097 KANSL2Q9H9L4 492 aa19.05■□□□□ 0.64
SCAMP4-201ENST00000316097 GEMIN8Q9NWZ8 242 aaKnown RBP19.05■□□□□ 0.64
SCAMP4-201ENST00000316097 GJA3Q9Y6H8 435 aa19.05■□□□□ 0.64
SCAMP4-201ENST00000316097 ASTN2O75129 1339 aaPredicted RBP19.05■□□□□ 0.64
SCAMP4-201ENST00000316097 RPN1P04843 607 aaKnown RBP19.05■□□□□ 0.64
SCAMP4-201ENST00000316097 IDEP14735 1019 aa19.05■□□□□ 0.64
SCAMP4-201ENST00000316097 ATP2C1P98194 919 aaPredicted RBP19.05■□□□□ 0.64
SCAMP4-201ENST00000316097 CCDC84Q86UT8 332 aaPredicted RBP19.05■□□□□ 0.64
SCAMP4-201ENST00000316097 BCAS4Q8TDM0 211 aa19.05■□□□□ 0.64
SCAMP4-201ENST00000316097 KAT2BQ92831 832 aa19.05■□□□□ 0.64
SCAMP4-201ENST00000316097 CAPS2Q9BXY5 557 aa19.05■□□□□ 0.64
SCAMP4-201ENST00000316097 A0A1W2PRG0 241 aa19.04■□□□□ 0.64
SCAMP4-201ENST00000316097 MACROD2A1Z1Q3 448 aa19.04■□□□□ 0.64
SCAMP4-201ENST00000316097 LGALS16A8MUM7 142 aa19.04■□□□□ 0.64
SCAMP4-201ENST00000316097 ECE1P42892 770 aa19.04■□□□□ 0.64
SCAMP4-201ENST00000316097 SPDYE2Q495Y8 402 aa19.04■□□□□ 0.64
SCAMP4-201ENST00000316097 ASPRV1Q53RT3 343 aa19.04■□□□□ 0.64
SCAMP4-201ENST00000316097 SND1Q7KZF4 910 aaKnown RBP eCLIP19.04■□□□□ 0.641e-7■■□□□ 11.5
SCAMP4-201ENST00000316097 FAM184BQ9ULE4 1060 aa19.04■□□□□ 0.64
SCAMP4-201ENST00000316097 CAPN11Q9UMQ6 739 aa19.04■□□□□ 0.64
SCAMP4-201ENST00000316097 DUSP10Q9Y6W6 482 aa19.04■□□□□ 0.64
SCAMP4-201ENST00000316097 NPM3O75607 178 aaKnown RBP19.04■□□□□ 0.64
SCAMP4-201ENST00000316097 TAL1P17542 331 aaPredicted RBP19.04■□□□□ 0.64
SCAMP4-201ENST00000316097 SLC1A4P43007 532 aa19.04■□□□□ 0.64
SCAMP4-201ENST00000316097 PPFIA1Q13136 1202 aa19.04■□□□□ 0.64
SCAMP4-201ENST00000316097 SAMD7Q7Z3H4 446 aa19.04■□□□□ 0.64
SCAMP4-201ENST00000316097 ZMYND12Q9H0C1 365 aa19.04■□□□□ 0.64
SCAMP4-201ENST00000316097 H7C1D1 291 aa19.03■□□□□ 0.64
SCAMP4-201ENST00000316097 SLFN13Q68D06 897 aa19.03■□□□□ 0.64
SCAMP4-201ENST00000316097 TTC19Q6DKK2 380 aaPredicted RBP19.03■□□□□ 0.64
SCAMP4-201ENST00000316097 AGBL3Q8NEM8 1001 aa19.03■□□□□ 0.64
SCAMP4-201ENST00000316097 AENQ8WTP8 325 aaKnown RBP19.03■□□□□ 0.64
SCAMP4-201ENST00000316097 MYOZ2Q9NPC6 264 aa19.03■□□□□ 0.64
SCAMP4-201ENST00000316097 RMND1Q9NWS8 449 aa19.03■□□□□ 0.64
SCAMP4-201ENST00000316097 F5H6K3 240 aa19.03■□□□□ 0.64
SCAMP4-201ENST00000316097 IPO7O95373 1038 aaKnown RBP19.03■□□□□ 0.64
SCAMP4-201ENST00000316097 CYLC1P35663 651 aaPredicted RBP19.03■□□□□ 0.64
SCAMP4-201ENST00000316097 GNGT1P63211 74 aa19.03■□□□□ 0.64
SCAMP4-201ENST00000316097 KLRC3Q07444 240 aa19.03■□□□□ 0.64
SCAMP4-201ENST00000316097 FAM151AQ8WW52 585 aa19.03■□□□□ 0.64
SCAMP4-201ENST00000316097 KIF13BQ9NQT8 1826 aa19.03■□□□□ 0.64
SCAMP4-201ENST00000316097 ATRNL1Q5VV63 1379 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms