RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 VAV3Q9UKW4 847 aa7.84□□□□□ -1.15
LYSMD3-201ENST00000315948 SMTNL1A8MU46 457 aa7.84□□□□□ -1.15
LYSMD3-201ENST00000315948 ZNF500O60304 480 aaPredicted RBP7.84□□□□□ -1.15
LYSMD3-201ENST00000315948 ATP9AO75110 1047 aa7.84□□□□□ -1.15
LYSMD3-201ENST00000315948 MYCLP12524 364 aaPredicted RBP7.84□□□□□ -1.15
LYSMD3-201ENST00000315948 MRPS9P82933 396 aaKnown RBP7.84□□□□□ -1.15
LYSMD3-201ENST00000315948 PAK1Q13153 545 aa7.84□□□□□ -1.15
LYSMD3-201ENST00000315948 SCYL3Q8IZE3 742 aa7.84□□□□□ -1.15
LYSMD3-201ENST00000315948 ADSSL1Q8N142 457 aa7.84□□□□□ -1.15
LYSMD3-201ENST00000315948 RAD54LQ92698 747 aa7.84□□□□□ -1.15
LYSMD3-201ENST00000315948 DUSP9Q99956 384 aaKnown RBP7.84□□□□□ -1.15
LYSMD3-201ENST00000315948 SRRTQ9BXP5 876 aaKnown RBP7.84□□□□□ -1.15
LYSMD3-201ENST00000315948 ELP3Q9H9T3 547 aa7.84□□□□□ -1.15
LYSMD3-201ENST00000315948 LAD1O00515 517 aa7.83□□□□□ -1.16
LYSMD3-201ENST00000315948 VWA5AO00534 786 aa7.83□□□□□ -1.16
LYSMD3-201ENST00000315948 DNTTIP2Q5QJE6 756 aaKnown RBP7.83□□□□□ -1.16
LYSMD3-201ENST00000315948 KRT26Q7Z3Y9 468 aa7.83□□□□□ -1.16
LYSMD3-201ENST00000315948 PRPF38AQ8NAV1 312 aaKnown RBP7.83□□□□□ -1.16
LYSMD3-201ENST00000315948 ZNF280CQ8ND82 737 aa7.83□□□□□ -1.16
LYSMD3-201ENST00000315948 CHURC1Q8WUH1 139 aa7.83□□□□□ -1.16
LYSMD3-201ENST00000315948 OTUD5Q96G74 571 aa7.83□□□□□ -1.16
LYSMD3-201ENST00000315948 CALML4Q96GE6 196 aa7.83□□□□□ -1.16
LYSMD3-201ENST00000315948 DESI2Q9BSY9 194 aa7.83□□□□□ -1.16
LYSMD3-201ENST00000315948 RUSC1Q9BVN2 902 aa7.83□□□□□ -1.16
LYSMD3-201ENST00000315948 KIAA1683Q9H0B3 1180 aa7.83□□□□□ -1.16
LYSMD3-201ENST00000315948 MORC2Q9Y6X9 1032 aaPredicted RBP7.83□□□□□ -1.16
LYSMD3-201ENST00000315948 IRF6O14896 467 aa7.83□□□□□ -1.16
LYSMD3-201ENST00000315948 TMEM132BQ14DG7 1078 aa7.83□□□□□ -1.16
LYSMD3-201ENST00000315948 TMEM266Q2M3C6 531 aa7.83□□□□□ -1.16
LYSMD3-201ENST00000315948 CDKAL1Q5VV42 579 aa7.83□□□□□ -1.16
LYSMD3-201ENST00000315948 TPH2Q8IWU9 490 aa7.83□□□□□ -1.16
LYSMD3-201ENST00000315948 DNAJC19Q96DA6 116 aa7.83□□□□□ -1.16
LYSMD3-201ENST00000315948 BHMT2Q9H2M3 363 aa7.83□□□□□ -1.16
LYSMD3-201ENST00000315948 SLC38A10Q9HBR0 1119 aa7.83□□□□□ -1.16
LYSMD3-201ENST00000315948 PICK1Q9NRD5 415 aa7.83□□□□□ -1.16
LYSMD3-201ENST00000315948 SNCAIPQ9Y6H5 919 aa7.83□□□□□ -1.16
LYSMD3-201ENST00000315948 ICAM1P05362 532 aa7.83□□□□□ -1.16
LYSMD3-201ENST00000315948 TPD52L1Q16890 204 aaPredicted RBP7.83□□□□□ -1.16
LYSMD3-201ENST00000315948 TMEM119Q4V9L6 283 aa7.83□□□□□ -1.16
LYSMD3-201ENST00000315948 SPATA1Q5VX52 437 aa7.83□□□□□ -1.16
LYSMD3-201ENST00000315948 SV2BQ7L1I2 683 aa7.83□□□□□ -1.16
LYSMD3-201ENST00000315948 VSTM4Q8IW00 320 aa7.83□□□□□ -1.16
LYSMD3-201ENST00000315948 GIMAP8Q8ND71 665 aaPredicted RBP7.83□□□□□ -1.16
LYSMD3-201ENST00000315948 FEM1BQ9UK73 627 aa7.83□□□□□ -1.16
LYSMD3-201ENST00000315948 PPP1R9AQ9ULJ8 1098 aa7.83□□□□□ -1.16
LYSMD3-201ENST00000315948 TFR2Q9UP52 801 aa7.83□□□□□ -1.16
LYSMD3-201ENST00000315948 ATAD5Q96QE3 1844 aa7.83□□□□□ -1.16
LYSMD3-201ENST00000315948 ABL1P00519 1130 aa7.83□□□□□ -1.16
LYSMD3-201ENST00000315948 PLA2G4BP0C869 781 aa7.83□□□□□ -1.16
LYSMD3-201ENST00000315948 MMP14P50281 582 aa7.83□□□□□ -1.16
LYSMD3-201ENST00000315948 ITGB3BPQ13352 177 aaPredicted RBP7.83□□□□□ -1.16
LYSMD3-201ENST00000315948 BAATQ14032 418 aaPredicted RBP7.83□□□□□ -1.16
LYSMD3-201ENST00000315948 SNRNP48Q6IEG0 339 aaKnown RBP7.83□□□□□ -1.16
LYSMD3-201ENST00000315948 GPBP1Q86WP2 473 aa7.83□□□□□ -1.16
LYSMD3-201ENST00000315948 DYDC2Q96IM9 177 aa7.83□□□□□ -1.16
LYSMD3-201ENST00000315948 AK8Q96MA6 479 aa7.83□□□□□ -1.16
LYSMD3-201ENST00000315948 TRERF1Q96PN7 1200 aa7.83□□□□□ -1.16
LYSMD3-201ENST00000315948 EXOC1Q9NV70 894 aa7.83□□□□□ -1.16
LYSMD3-201ENST00000315948 TULP1O00294 542 aaPredicted RBP7.82□□□□□ -1.16
LYSMD3-201ENST00000315948 RHOBTB3O94955 611 aa7.82□□□□□ -1.16
LYSMD3-201ENST00000315948 USP11P51784 963 aa7.82□□□□□ -1.16
LYSMD3-201ENST00000315948 SOX10P56693 466 aa7.82□□□□□ -1.16
LYSMD3-201ENST00000315948 MAP1SQ66K74 1059 aaPredicted RBP7.82□□□□□ -1.16
LYSMD3-201ENST00000315948 E4F1Q66K89 784 aaPredicted RBP7.82□□□□□ -1.16
LYSMD3-201ENST00000315948 TTI2Q6NXR4 508 aa7.82□□□□□ -1.16
LYSMD3-201ENST00000315948 ELOA2Q8IYF1 753 aaPredicted RBP7.82□□□□□ -1.16
LYSMD3-201ENST00000315948 TRIML1Q8N9V2 468 aa7.82□□□□□ -1.16
LYSMD3-201ENST00000315948 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.82□□□□□ -1.16
LYSMD3-201ENST00000315948 SYTL5Q8TDW5 730 aaPredicted RBP7.82□□□□□ -1.16
LYSMD3-201ENST00000315948 TRIM47Q96LD4 638 aa7.82□□□□□ -1.16
LYSMD3-201ENST00000315948 UNC45AQ9H3U1 944 aa7.82□□□□□ -1.16
LYSMD3-201ENST00000315948 SBF1O95248 1867 aa7.82□□□□□ -1.16
LYSMD3-201ENST00000315948 CYP3A7-CYP3A51PA0A087WV96 503 aa7.82□□□□□ -1.16
LYSMD3-201ENST00000315948 FANCGO15287 622 aa7.82□□□□□ -1.16
LYSMD3-201ENST00000315948 CYP3A7P24462 503 aa7.82□□□□□ -1.16
LYSMD3-201ENST00000315948 FXR1P51114 621 aaKnown RBP eCLIP7.82□□□□□ -1.16
LYSMD3-201ENST00000315948 CNTN2Q02246 1040 aa7.82□□□□□ -1.16
LYSMD3-201ENST00000315948 RBL2Q08999 1139 aa7.82□□□□□ -1.16
LYSMD3-201ENST00000315948 NR1I3Q14994 352 aa7.82□□□□□ -1.16
LYSMD3-201ENST00000315948 GPR162Q16538 588 aa7.82□□□□□ -1.16
LYSMD3-201ENST00000315948 LRCH2Q5VUJ6 765 aa7.82□□□□□ -1.16
LYSMD3-201ENST00000315948 FAM177A1Q8N128 213 aaPredicted RBP7.82□□□□□ -1.16
LYSMD3-201ENST00000315948 ZNF592Q92610 1267 aa7.82□□□□□ -1.16
LYSMD3-201ENST00000315948 EIF2AK1Q9BQI3 630 aaKnown RBP7.82□□□□□ -1.16
LYSMD3-201ENST00000315948 KCNH7Q9NS40 1196 aa7.82□□□□□ -1.16
LYSMD3-201ENST00000315948 ADD3Q9UEY8 706 aaKnown RBP7.82□□□□□ -1.16
LYSMD3-201ENST00000315948 ASTN1O14525 1302 aa7.82□□□□□ -1.16
LYSMD3-201ENST00000315948 B4DLN1 442 aa7.82□□□□□ -1.16
LYSMD3-201ENST00000315948 KCNJ18B7U540 433 aa7.82□□□□□ -1.16
LYSMD3-201ENST00000315948 CYP11B2P19099 503 aa7.82□□□□□ -1.16
LYSMD3-201ENST00000315948 AP3B2Q13367 1082 aa7.82□□□□□ -1.16
LYSMD3-201ENST00000315948 TTLL12Q14166 644 aaPredicted RBP7.82□□□□□ -1.16
LYSMD3-201ENST00000315948 KCNJ12Q14500 433 aa7.82□□□□□ -1.16
LYSMD3-201ENST00000315948 CEP55Q53EZ4 464 aa7.82□□□□□ -1.16
LYSMD3-201ENST00000315948 UTP14CQ5TAP6 766 aaKnown RBP7.82□□□□□ -1.16
LYSMD3-201ENST00000315948 OTOP1Q7RTM1 612 aa7.82□□□□□ -1.16
LYSMD3-201ENST00000315948 ZNF526Q8TF50 670 aaPredicted RBP7.82□□□□□ -1.16
LYSMD3-201ENST00000315948 MBOAT7Q96N66 472 aa7.82□□□□□ -1.16
LYSMD3-201ENST00000315948 TESPA1A2RU30 521 aaPredicted RBP7.81□□□□□ -1.16
LYSMD3-201ENST00000315948 WDR46O15213 610 aaKnown RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms