RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 ASTN1O14525 1302 aa8.79□□□□□ -1
CNOT4-201ENST00000315544 GBF1Q92538 1859 aa8.79□□□□□ -1
CNOT4-201ENST00000315544 PIK3CDO00329 1044 aa8.79□□□□□ -1
CNOT4-201ENST00000315544 IFIT3O14879 490 aaKnown RBP8.79□□□□□ -1
CNOT4-201ENST00000315544 HSPA6P17066 643 aa8.79□□□□□ -1
CNOT4-201ENST00000315544 FKBP1BP68106 108 aa8.79□□□□□ -1
CNOT4-201ENST00000315544 WHAMMP3Q1A5X7 153 aa8.79□□□□□ -1
CNOT4-201ENST00000315544 FILIP1Q7Z7B0 1213 aa8.79□□□□□ -1
CNOT4-201ENST00000315544 EDEM3Q9BZQ6 932 aa8.79□□□□□ -1
CNOT4-201ENST00000315544 ADARB2Q9NS39 739 aaKnown RBP8.79□□□□□ -1
CNOT4-201ENST00000315544 ZDHHC18Q9NUE0 388 aa8.79□□□□□ -1
CNOT4-201ENST00000315544 SNX12Q9UMY4 172 aa8.79□□□□□ -1
CNOT4-201ENST00000315544 GOLGA6L9A6NEM1 432 aa8.79□□□□□ -1
CNOT4-201ENST00000315544 ZNF233A6NK53 670 aa8.79□□□□□ -1
CNOT4-201ENST00000315544 TBC1D12O60347 775 aa8.79□□□□□ -1
CNOT4-201ENST00000315544 CASP5P51878 434 aa8.79□□□□□ -1
CNOT4-201ENST00000315544 UBAP2Q5T6F2 1119 aaKnown RBP8.79□□□□□ -1
CNOT4-201ENST00000315544 CCDC170Q8IYT3 715 aa8.79□□□□□ -1
CNOT4-201ENST00000315544 CNNM3Q8NE01 707 aa8.79□□□□□ -1
CNOT4-201ENST00000315544 COG1Q8WTW3 980 aa8.79□□□□□ -1
CNOT4-201ENST00000315544 ZDHHC15Q96MV8 337 aa8.79□□□□□ -1
CNOT4-201ENST00000315544 IDI2Q9BXS1 227 aa8.79□□□□□ -1
CNOT4-201ENST00000315544 SYNPO2Q9UMS6 1093 aa8.79□□□□□ -1
CNOT4-201ENST00000315544 CHD5Q8TDI0 1954 aa8.79□□□□□ -1
CNOT4-201ENST00000315544 PVALEFA0A1B0GWK0 134 aa8.78□□□□□ -1
CNOT4-201ENST00000315544 SPDYE2BA6NHP3 402 aa8.78□□□□□ -1
CNOT4-201ENST00000315544 ECE2O60344 883 aa8.78□□□□□ -1
CNOT4-201ENST00000315544 SPDYE6P0CI01 402 aa8.78□□□□□ -1
CNOT4-201ENST00000315544 MAPK7Q13164 816 aa8.78□□□□□ -1
CNOT4-201ENST00000315544 SPDYE2Q495Y8 402 aa8.78□□□□□ -1
CNOT4-201ENST00000315544 Q4G0T1 1027 aa8.78□□□□□ -1
CNOT4-201ENST00000315544 HHIPL2Q6UWX4 724 aa8.78□□□□□ -1
CNOT4-201ENST00000315544 NCANO14594 1321 aa8.78□□□□□ -1
CNOT4-201ENST00000315544 USP17L3A6NCW0 530 aa8.78□□□□□ -1
CNOT4-201ENST00000315544 USP17L4A6NCW7 530 aa8.78□□□□□ -1
CNOT4-201ENST00000315544 BMP15O95972 392 aa8.78□□□□□ -1
CNOT4-201ENST00000315544 CYP3A4P08684 503 aa8.78□□□□□ -1
CNOT4-201ENST00000315544 TRIM14Q14142 442 aa8.78□□□□□ -1
CNOT4-201ENST00000315544 PPP1R18Q6NYC8 613 aa8.78□□□□□ -1
CNOT4-201ENST00000315544 USP17L1Q7RTZ2 530 aa8.78□□□□□ -1
CNOT4-201ENST00000315544 SCFD1Q8WVM8 642 aa8.78□□□□□ -1
CNOT4-201ENST00000315544 JMJD4Q9H9V9 463 aa8.78□□□□□ -1
CNOT4-201ENST00000315544 SSU72P8A0A1W2PR75 194 aa8.78□□□□□ -1
CNOT4-201ENST00000315544 TRIM75PA6NK02 468 aa8.78□□□□□ -1
CNOT4-201ENST00000315544 COBLO75128 1261 aa8.78□□□□□ -1
CNOT4-201ENST00000315544 BMS1Q14692 1282 aaKnown RBP8.78□□□□□ -1
CNOT4-201ENST00000315544 SLC44A5Q8NCS7 719 aa8.78□□□□□ -1
CNOT4-201ENST00000315544 ESR2Q92731 530 aa8.78□□□□□ -1
CNOT4-201ENST00000315544 DYNLL2Q96FJ2 89 aa8.78□□□□□ -1
CNOT4-201ENST00000315544 CCDC85AQ96PX6 553 aaPredicted RBP8.78□□□□□ -1
CNOT4-201ENST00000315544 NEUROG2Q9H2A3 272 aa8.78□□□□□ -1
CNOT4-201ENST00000315544 MTMR4Q9NYA4 1195 aa8.78□□□□□ -1
CNOT4-201ENST00000315544 SWAP70Q9UH65 585 aa8.78□□□□□ -1
CNOT4-201ENST00000315544 hCG_1642624A0A1W2PR95 340 aa8.77□□□□□ -1
CNOT4-201ENST00000315544 ZNF185O15231 689 aa8.77□□□□□ -1
CNOT4-201ENST00000315544 DDX3YO15523 660 aaKnown RBP8.77□□□□□ -1
CNOT4-201ENST00000315544 CBFA2T2O43439 604 aa8.77□□□□□ -1
CNOT4-201ENST00000315544 CCNE1P24864 410 aa8.77□□□□□ -1
CNOT4-201ENST00000315544 KARSQ15046 597 aaKnown RBP8.77□□□□□ -1
CNOT4-201ENST00000315544 KIF4BQ2VIQ3 1234 aa8.77□□□□□ -1
CNOT4-201ENST00000315544 FAM228AQ86W67 206 aa8.77□□□□□ -1
CNOT4-201ENST00000315544 TMTC1Q8IUR5 882 aa8.77□□□□□ -1
CNOT4-201ENST00000315544 GUF1Q8N442 669 aaKnown RBP8.77□□□□□ -1
CNOT4-201ENST00000315544 AIDAQ96BJ3 306 aa8.77□□□□□ -1
CNOT4-201ENST00000315544 RIC8AQ9NPQ8 531 aa8.77□□□□□ -1
CNOT4-201ENST00000315544 TTF2Q9UNY4 1162 aaKnown RBP8.77□□□□□ -1
CNOT4-201ENST00000315544 TGFB1I1O43294 461 aa8.77□□□□□ -1.01
CNOT4-201ENST00000315544 PLCG1P19174 1290 aa8.77□□□□□ -1.01
CNOT4-201ENST00000315544 POTEDQ86YR6 584 aa8.77□□□□□ -1.01
CNOT4-201ENST00000315544 DMGDHQ9UI17 866 aaKnown RBP8.77□□□□□ -1.01
CNOT4-201ENST00000315544 hCG_1984214I3L0E3 225 aa8.77□□□□□ -1.01
CNOT4-201ENST00000315544 CLDN10P78369 228 aa8.77□□□□□ -1.01
CNOT4-201ENST00000315544 SMC1AQ14683 1233 aaKnown RBP8.77□□□□□ -1.01
CNOT4-201ENST00000315544 CASP8Q14790 479 aa8.77□□□□□ -1.01
CNOT4-201ENST00000315544 TRADDQ15628 312 aa8.77□□□□□ -1.01
CNOT4-201ENST00000315544 NCAPH2Q6IBW4 605 aa8.77□□□□□ -1.01
CNOT4-201ENST00000315544 SRLQ86TD4 932 aa8.77□□□□□ -1.01
CNOT4-201ENST00000315544 TEX2Q8IWB9 1127 aa8.77□□□□□ -1.01
CNOT4-201ENST00000315544 ZNF713Q8N859 430 aaPredicted RBP8.77□□□□□ -1.01
CNOT4-201ENST00000315544 NELFBQ8WX92 580 aa8.77□□□□□ -1.01
CNOT4-201ENST00000315544 HES6Q96HZ4 224 aa8.77□□□□□ -1.01
CNOT4-201ENST00000315544 NAPBQ9H115 298 aa8.77□□□□□ -1.01
CNOT4-201ENST00000315544 BLZF1Q9H2G9 400 aa8.77□□□□□ -1.01
CNOT4-201ENST00000315544 RNF41Q9H4P4 317 aaPredicted RBP8.77□□□□□ -1.01
CNOT4-201ENST00000315544 NFASCO94856 1347 aa8.77□□□□□ -1.01
CNOT4-201ENST00000315544 PHF20L1A8MW92 1017 aa8.76□□□□□ -1.01
CNOT4-201ENST00000315544 YY1P25490 414 aa8.76□□□□□ -1.01
CNOT4-201ENST00000315544 APLP1P51693 650 aa8.76□□□□□ -1.01
CNOT4-201ENST00000315544 EPHA7Q15375 998 aa8.76□□□□□ -1.01
CNOT4-201ENST00000315544 SYNE3Q6ZMZ3 975 aa8.76□□□□□ -1.01
CNOT4-201ENST00000315544 SMC1BQ8NDV3 1235 aa8.76□□□□□ -1.01
CNOT4-201ENST00000315544 CD209Q9NNX6 404 aa8.76□□□□□ -1.01
CNOT4-201ENST00000315544 FAM198AQ9UFP1 575 aa8.76□□□□□ -1.01
CNOT4-201ENST00000315544 GGA2Q9UJY4 613 aa8.76□□□□□ -1.01
CNOT4-201ENST00000315544 ADSSP30520 456 aa8.76□□□□□ -1.01
CNOT4-201ENST00000315544 PAK1Q13153 545 aa8.76□□□□□ -1.01
CNOT4-201ENST00000315544 ARTNQ5T4W7 220 aa8.76□□□□□ -1.01
CNOT4-201ENST00000315544 DAW1Q8N136 415 aa8.76□□□□□ -1.01
CNOT4-201ENST00000315544 PLCB1Q9NQ66 1216 aa8.76□□□□□ -1.01
CNOT4-201ENST00000315544 PDLIM7Q9NR12 457 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms