RNA–Protein interactions for RNA: ENST00000309862.10

PGAP3-202, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 2

Gene PGAP3, Length 3,028 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-202ENST00000309862 TRAF5O00463 557 aa17.04■□□□□ 0.32
PGAP3-202ENST00000309862 RAD51CO43502 376 aa17.04■□□□□ 0.32
PGAP3-202ENST00000309862 GNAQP50148 359 aa17.04■□□□□ 0.32
PGAP3-202ENST00000309862 RAPGEF1Q13905 1077 aa17.04■□□□□ 0.32
PGAP3-202ENST00000309862 KIAA0753Q2KHM9 967 aa17.04■□□□□ 0.32
PGAP3-202ENST00000309862 CCDC40Q4G0X9 1142 aa17.04■□□□□ 0.32
PGAP3-202ENST00000309862 C12orf60Q5U649 245 aa17.04■□□□□ 0.32
PGAP3-202ENST00000309862 SH3RF3Q8TEJ3 882 aaPredicted RBP17.04■□□□□ 0.32
PGAP3-202ENST00000309862 LARP4BQ92615 738 aaKnown RBP17.04■□□□□ 0.32
PGAP3-202ENST00000309862 PNMA5Q96PV4 448 aa17.04■□□□□ 0.32
PGAP3-202ENST00000309862 CCT8L2Q96SF2 557 aa17.04■□□□□ 0.32
PGAP3-202ENST00000309862 EPN3Q9H201 632 aa17.04■□□□□ 0.32
PGAP3-202ENST00000309862 MAGEF1Q9HAY2 307 aa17.04■□□□□ 0.32
PGAP3-202ENST00000309862 BCCIPQ9P287 314 aaKnown RBP eCLIP17.04■□□□□ 0.32
PGAP3-202ENST00000309862 SLC9C1Q4G0N8 1177 aa17.04■□□□□ 0.32
PGAP3-202ENST00000309862 FAM83BQ5T0W9 1011 aa17.04■□□□□ 0.32
PGAP3-202ENST00000309862 KDM7AQ6ZMT4 941 aa17.04■□□□□ 0.32
PGAP3-202ENST00000309862 LRRC55Q6ZSA7 311 aa17.04■□□□□ 0.32
PGAP3-202ENST00000309862 FBXO33Q7Z6M2 555 aa17.04■□□□□ 0.32
PGAP3-202ENST00000309862 NELFCDQ8IXH7 590 aa17.04■□□□□ 0.32
PGAP3-202ENST00000309862 DAGLBQ8NCG7 672 aa17.04■□□□□ 0.32
PGAP3-202ENST00000309862 LSM14BQ9BX40 385 aaKnown RBP17.04■□□□□ 0.32
PGAP3-202ENST00000309862 A0A087X0T9 212 aa17.03■□□□□ 0.32
PGAP3-202ENST00000309862 PPP1R37O75864 691 aa17.03■□□□□ 0.32
PGAP3-202ENST00000309862 FAM228BP0C875 321 aa17.03■□□□□ 0.32
PGAP3-202ENST00000309862 PTGISQ16647 500 aa17.03■□□□□ 0.32
PGAP3-202ENST00000309862 SBK1Q52WX2 424 aa17.03■□□□□ 0.32
PGAP3-202ENST00000309862 SFMBT2Q5VUG0 894 aa17.03■□□□□ 0.32
PGAP3-202ENST00000309862 UNC13DQ70J99 1090 aa17.03■□□□□ 0.32
PGAP3-202ENST00000309862 TGFBRAP1Q8WUH2 860 aa17.03■□□□□ 0.32
PGAP3-202ENST00000309862 DDX12PQ92771 950 aa17.03■□□□□ 0.32
PGAP3-202ENST00000309862 JPH2Q9BR39 696 aaPredicted RBP17.03■□□□□ 0.32
PGAP3-202ENST00000309862 ZMYND12Q9H0C1 365 aa17.03■□□□□ 0.32
PGAP3-202ENST00000309862 SLAIN2Q9P270 581 aa17.03■□□□□ 0.32
PGAP3-202ENST00000309862 DCCP43146 1447 aa17.03■□□□□ 0.32
PGAP3-202ENST00000309862 TDP2O95551 362 aa17.03■□□□□ 0.32
PGAP3-202ENST00000309862 FNTAP49354 379 aa17.03■□□□□ 0.32
PGAP3-202ENST00000309862 CACNB1Q02641 598 aaPredicted RBP17.03■□□□□ 0.32
PGAP3-202ENST00000309862 KRT25Q7Z3Z0 450 aa17.03■□□□□ 0.32
PGAP3-202ENST00000309862 PIGSQ96S52 555 aa17.03■□□□□ 0.32
PGAP3-202ENST00000309862 MYCBPQ99417 103 aaPredicted RBP17.03■□□□□ 0.32
PGAP3-202ENST00000309862 SLC37A4O43826 429 aa17.02■□□□□ 0.32
PGAP3-202ENST00000309862 NOL4O94818 638 aa17.02■□□□□ 0.32
PGAP3-202ENST00000309862 GLE1Q53GS7 698 aaKnown RBP17.02■□□□□ 0.32
PGAP3-202ENST00000309862 SOGA3Q5TF21 947 aa17.02■□□□□ 0.32
PGAP3-202ENST00000309862 NLRP14Q86W24 1093 aa17.02■□□□□ 0.32
PGAP3-202ENST00000309862 MAPKAPK5Q8IW41 473 aa17.02■□□□□ 0.32
PGAP3-202ENST00000309862 FAM133AQ8N9E0 248 aa17.02■□□□□ 0.32
PGAP3-202ENST00000309862 RUBCNQ92622 972 aa17.02■□□□□ 0.32
PGAP3-202ENST00000309862 ATP6V1G3Q96LB4 118 aa17.02■□□□□ 0.32
PGAP3-202ENST00000309862 CEP89Q96ST8 783 aa17.02■□□□□ 0.32
PGAP3-202ENST00000309862 FGFBP2Q9BYJ0 223 aa17.02■□□□□ 0.32
PGAP3-202ENST00000309862 CD248Q9HCU0 757 aa17.02■□□□□ 0.32
PGAP3-202ENST00000309862 GEMIN8Q9NWZ8 242 aaKnown RBP17.02■□□□□ 0.32
PGAP3-202ENST00000309862 NHSL1Q5SYE7 1610 aa17.02■□□□□ 0.32
PGAP3-202ENST00000309862 PALM3A6NDB9 673 aaPredicted RBP17.02■□□□□ 0.32
PGAP3-202ENST00000309862 KCNK3O14649 394 aa17.02■□□□□ 0.32
PGAP3-202ENST00000309862 CALCRLQ16602 461 aa17.02■□□□□ 0.32
PGAP3-202ENST00000309862 CNPY4Q8N129 248 aa17.02■□□□□ 0.32
PGAP3-202ENST00000309862 PRPF38AQ8NAV1 312 aaKnown RBP17.02■□□□□ 0.32
PGAP3-202ENST00000309862 MYCBPAPQ8TBZ2 947 aa17.02■□□□□ 0.32
PGAP3-202ENST00000309862 AP1M1Q9BXS5 423 aa17.02■□□□□ 0.32
PGAP3-202ENST00000309862 C6orf50Q9HD87 102 aa17.02■□□□□ 0.32
PGAP3-202ENST00000309862 STRCP1A6NGW2 1772 aa17.02■□□□□ 0.31
PGAP3-202ENST00000309862 TNFRSF8P28908 595 aa17.02■□□□□ 0.31
PGAP3-202ENST00000309862 MDH1P40925 334 aaKnown RBP17.02■□□□□ 0.31
PGAP3-202ENST00000309862 GUF1Q8N442 669 aaKnown RBP17.02■□□□□ 0.31
PGAP3-202ENST00000309862 RNF10Q8N5U6 811 aaKnown RBP17.02■□□□□ 0.31
PGAP3-202ENST00000309862 SNX29Q8TEQ0 813 aa17.02■□□□□ 0.31
PGAP3-202ENST00000309862 A0A1B0GUL6 1792 aa17.01■□□□□ 0.31
PGAP3-202ENST00000309862 LOC102724428A0A0B4J2F2 783 aa17.01■□□□□ 0.31
PGAP3-202ENST00000309862 PPP1R2P41236 205 aa17.01■□□□□ 0.31
PGAP3-202ENST00000309862 SIK1P57059 783 aa17.01■□□□□ 0.31
PGAP3-202ENST00000309862 SWT1Q5T5J6 900 aaKnown RBP17.01■□□□□ 0.31
PGAP3-202ENST00000309862 GALNT17Q6IS24 598 aa17.01■□□□□ 0.31
PGAP3-202ENST00000309862 TMOD1P28289 359 aa17.01■□□□□ 0.31
PGAP3-202ENST00000309862 SF3A3Q12874 501 aaKnown RBP eCLIP17.01■□□□□ 0.31
PGAP3-202ENST00000309862 SF3B2Q13435 895 aaKnown RBP17.01■□□□□ 0.31
PGAP3-202ENST00000309862 NAB2Q15742 525 aa17.01■□□□□ 0.31
PGAP3-202ENST00000309862 GRIK5Q16478 980 aa17.01■□□□□ 0.31
PGAP3-202ENST00000309862 CCDC91Q7Z6B0 441 aa17.01■□□□□ 0.31
PGAP3-202ENST00000309862 COA7Q96BR5 231 aa17.01■□□□□ 0.31
PGAP3-202ENST00000309862 IQCDQ96DY2 449 aa17.01■□□□□ 0.31
PGAP3-202ENST00000309862 CABS1Q96KC9 395 aa17.01■□□□□ 0.31
PGAP3-202ENST00000309862 SSU72P8A0A1W2PR75 194 aa17■□□□□ 0.31
PGAP3-202ENST00000309862 ATP2C2O75185 946 aa17■□□□□ 0.31
PGAP3-202ENST00000309862 FGFR1OPO95684 399 aaKnown RBP17■□□□□ 0.31
PGAP3-202ENST00000309862 ERVK-9P63128 1117 aa17■□□□□ 0.31
PGAP3-202ENST00000309862 SEMA3FQ13275 785 aa17■□□□□ 0.31
PGAP3-202ENST00000309862 CDC37Q16543 378 aaPredicted RBP17■□□□□ 0.31
PGAP3-202ENST00000309862 ECM1Q16610 540 aa17■□□□□ 0.31
PGAP3-202ENST00000309862 REXO1Q8N1G1 1221 aaKnown RBP17■□□□□ 0.31
PGAP3-202ENST00000309862 INPP4AQ96PE3 977 aaPredicted RBP17■□□□□ 0.31
PGAP3-202ENST00000309862 SERPING1P05155 500 aa17■□□□□ 0.31
PGAP3-202ENST00000309862 TSG101Q99816 390 aa17■□□□□ 0.31
PGAP3-202ENST00000309862 GRID2IPA4D2P6 1211 aa16.99■□□□□ 0.31
PGAP3-202ENST00000309862 CEP104O60308 925 aa16.99■□□□□ 0.31
PGAP3-202ENST00000309862 GNA11P29992 359 aa16.99■□□□□ 0.31
PGAP3-202ENST00000309862 KLHL30Q0D2K2 578 aa16.99■□□□□ 0.31
PGAP3-202ENST00000309862 ITGB3BPQ13352 177 aaPredicted RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms