RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 DICER1Q9UPY3 1922 aaKnown RBP23.75■■□□□ 1.39
ATG4D-201ENST00000309469 KCNJ18B7U540 433 aa23.74■■□□□ 1.39
ATG4D-201ENST00000309469 PLA2G4BP0C869 781 aa23.74■■□□□ 1.39
ATG4D-201ENST00000309469 CCNE1P24864 410 aa23.74■■□□□ 1.39
ATG4D-201ENST00000309469 KCNJ12Q14500 433 aa23.74■■□□□ 1.39
ATG4D-201ENST00000309469 ANKRD20A12PQ8NF67 263 aa23.74■■□□□ 1.39
ATG4D-201ENST00000309469 SLC39A2Q9NP94 309 aa23.74■■□□□ 1.39
ATG4D-201ENST00000309469 DOCK1Q14185 1865 aa23.74■■□□□ 1.39
ATG4D-201ENST00000309469 BICDL2A1A5D9 508 aa23.74■■□□□ 1.39
ATG4D-201ENST00000309469 NFIBO00712 420 aa23.74■■□□□ 1.39
ATG4D-201ENST00000309469 NRDCO43847 1150 aa23.74■■□□□ 1.39
ATG4D-201ENST00000309469 ZBED4O75132 1171 aa23.74■■□□□ 1.39
ATG4D-201ENST00000309469 SSBP05455 408 aaKnown RBP eCLIP23.74■■□□□ 1.39
ATG4D-201ENST00000309469 ALAS1P13196 640 aa23.74■■□□□ 1.39
ATG4D-201ENST00000309469 IDEP14735 1019 aa23.74■■□□□ 1.39
ATG4D-201ENST00000309469 RPA1P27694 616 aa23.74■■□□□ 1.39
ATG4D-201ENST00000309469 GHRHRQ02643 423 aa23.74■■□□□ 1.39
ATG4D-201ENST00000309469 CEP55Q53EZ4 464 aa23.74■■□□□ 1.39
ATG4D-201ENST00000309469 IRF2BP1Q8IU81 584 aa23.74■■□□□ 1.39
ATG4D-201ENST00000309469 DNAJC19Q96DA6 116 aa23.74■■□□□ 1.39
ATG4D-201ENST00000309469 TRIM47Q96LD4 638 aa23.74■■□□□ 1.39
ATG4D-201ENST00000309469 PITPNM2Q9BZ72 1349 aa23.73■■□□□ 1.39
ATG4D-201ENST00000309469 SPATA31C1P0DKV0 1188 aa23.73■■□□□ 1.39
ATG4D-201ENST00000309469 FDX1P10109 184 aa23.73■■□□□ 1.39
ATG4D-201ENST00000309469 HOXA7P31268 230 aaPredicted RBP23.73■■□□□ 1.39
ATG4D-201ENST00000309469 TERF1P54274 439 aa23.73■■□□□ 1.39
ATG4D-201ENST00000309469 EHHADHQ08426 723 aa23.73■■□□□ 1.39
ATG4D-201ENST00000309469 PSMD2Q13200 908 aa23.73■■□□□ 1.39
ATG4D-201ENST00000309469 NOC3LQ8WTT2 800 aaKnown RBP23.73■■□□□ 1.39
ATG4D-201ENST00000309469 THAP9Q9H5L6 903 aa23.73■■□□□ 1.39
ATG4D-201ENST00000309469 RNF181Q9P0P0 153 aa23.73■■□□□ 1.39
ATG4D-201ENST00000309469 PNMA2Q9UL42 364 aa23.73■■□□□ 1.39
ATG4D-201ENST00000309469 RABGAP1Q9Y3P9 1069 aa23.73■■□□□ 1.39
ATG4D-201ENST00000309469 CTDP1Q9Y5B0 961 aaPredicted RBP23.73■■□□□ 1.39
ATG4D-201ENST00000309469 SSC5DA1L4H1 1573 aa23.73■■□□□ 1.39
ATG4D-201ENST00000309469 POTEFA5A3E0 1075 aa23.72■■□□□ 1.39
ATG4D-201ENST00000309469 POTEIP0CG38 1075 aa23.72■■□□□ 1.39
ATG4D-201ENST00000309469 PBX1P40424 430 aa23.72■■□□□ 1.39
ATG4D-201ENST00000309469 COPB1P53618 953 aaKnown RBP23.72■■□□□ 1.39
ATG4D-201ENST00000309469 POTEGQ6S5H5 508 aa23.72■■□□□ 1.39
ATG4D-201ENST00000309469 POTEEQ6S8J3 1075 aa23.72■■□□□ 1.39
ATG4D-201ENST00000309469 SLC5A5Q92911 643 aa23.72■■□□□ 1.39
ATG4D-201ENST00000309469 C12orf42Q96LP6 360 aa23.72■■□□□ 1.39
ATG4D-201ENST00000309469 DUSP9Q99956 384 aaKnown RBP23.72■■□□□ 1.39
ATG4D-201ENST00000309469 SYT17Q9BSW7 474 aa23.72■■□□□ 1.39
ATG4D-201ENST00000309469 SRRTQ9BXP5 876 aaKnown RBP23.72■■□□□ 1.39
ATG4D-201ENST00000309469 ADARB2Q9NS39 739 aaKnown RBP23.72■■□□□ 1.39
ATG4D-201ENST00000309469 C19orf81C9J6K1 198 aa23.72■■□□□ 1.39
ATG4D-201ENST00000309469 MEIS1O00470 390 aa23.72■■□□□ 1.39
ATG4D-201ENST00000309469 NOL9Q5SY16 702 aaKnown RBP23.72■■□□□ 1.39
ATG4D-201ENST00000309469 ANKRD40Q6AI12 368 aa23.72■■□□□ 1.39
ATG4D-201ENST00000309469 COL20A1Q9P218 1284 aa23.72■■□□□ 1.39
ATG4D-201ENST00000309469 N4BP3O15049 544 aa23.71■■□□□ 1.39
ATG4D-201ENST00000309469 PSMD10O75832 226 aa23.71■■□□□ 1.39
ATG4D-201ENST00000309469 MUM1L1Q5H9M0 696 aa23.71■■□□□ 1.39
ATG4D-201ENST00000309469 OTOP1Q7RTM1 612 aa23.71■■□□□ 1.39
ATG4D-201ENST00000309469 CCDC112Q8NEF3 446 aa23.71■■□□□ 1.39
ATG4D-201ENST00000309469 POLR3CQ9BUI4 534 aaPredicted RBP23.71■■□□□ 1.39
ATG4D-201ENST00000309469 TMX1Q9H3N1 280 aa23.71■■□□□ 1.39
ATG4D-201ENST00000309469 MAP3K20Q9NYL2 800 aaKnown RBP23.71■■□□□ 1.39
ATG4D-201ENST00000309469 RPTORQ8N122 1335 aa23.71■■□□□ 1.39
ATG4D-201ENST00000309469 EML1O00423 815 aa23.71■■□□□ 1.39
ATG4D-201ENST00000309469 VWA5AO00534 786 aa23.71■■□□□ 1.39
ATG4D-201ENST00000309469 EEF1GP26641 437 aaKnown RBP23.71■■□□□ 1.39
ATG4D-201ENST00000309469 HMGCS2P54868 508 aa23.71■■□□□ 1.39
ATG4D-201ENST00000309469 SLC12A3P55017 1021 aa23.71■■□□□ 1.39
ATG4D-201ENST00000309469 LRCH2Q5VUJ6 765 aa23.71■■□□□ 1.39
ATG4D-201ENST00000309469 GPBP1Q86WP2 473 aa23.71■■□□□ 1.39
ATG4D-201ENST00000309469 CREBRFQ8IUR6 639 aa23.71■■□□□ 1.39
ATG4D-201ENST00000309469 CSGALNACT2Q8N6G5 542 aa23.71■■□□□ 1.39
ATG4D-201ENST00000309469 SAMD3Q8N6K7 520 aa23.71■■□□□ 1.39
ATG4D-201ENST00000309469 VPS16Q9H269 839 aa23.71■■□□□ 1.39
ATG4D-201ENST00000309469 PANK4Q9NVE7 773 aa23.71■■□□□ 1.39
ATG4D-201ENST00000309469 TAB2Q9NYJ8 693 aa23.71■■□□□ 1.39
ATG4D-201ENST00000309469 DNM3Q9UQ16 869 aa23.71■■□□□ 1.39
ATG4D-201ENST00000309469 CYP11B2P19099 503 aa23.7■■□□□ 1.38
ATG4D-201ENST00000309469 SETQ01105 290 aaPredicted RBP23.7■■□□□ 1.38
ATG4D-201ENST00000309469 GOLGA8FQ08AF8 430 aa23.7■■□□□ 1.38
ATG4D-201ENST00000309469 GOLGA8DPQ0D2H9 430 aa23.7■■□□□ 1.38
ATG4D-201ENST00000309469 CENPPQ6IPU0 288 aa23.7■■□□□ 1.38
ATG4D-201ENST00000309469 GUF1Q8N442 669 aaKnown RBP23.7■■□□□ 1.38
ATG4D-201ENST00000309469 ATG4CQ96DT6 458 aa23.7■■□□□ 1.38
ATG4D-201ENST00000309469 ZFP91Q96JP5 570 aaPredicted RBP23.7■■□□□ 1.38
ATG4D-201ENST00000309469 EIF2AK1Q9BQI3 630 aaKnown RBP23.7■■□□□ 1.38
ATG4D-201ENST00000309469 SEMA6BQ9H3T3 888 aa23.7■■□□□ 1.38
ATG4D-201ENST00000309469 KCND1Q9NSA2 647 aa23.7■■□□□ 1.38
ATG4D-201ENST00000309469 HOMER2Q9NSB8 354 aa23.7■■□□□ 1.38
ATG4D-201ENST00000309469 SBF1O95248 1867 aa23.7■■□□□ 1.38
ATG4D-201ENST00000309469 USP2O75604 605 aaPredicted RBP23.69■■□□□ 1.38
ATG4D-201ENST00000309469 ARP10275 920 aa23.69■■□□□ 1.38
ATG4D-201ENST00000309469 KCNJ6P48051 423 aa23.69■■□□□ 1.38
ATG4D-201ENST00000309469 PSMC6P62333 389 aa23.69■■□□□ 1.38
ATG4D-201ENST00000309469 COASYQ13057 564 aa23.69■■□□□ 1.38
ATG4D-201ENST00000309469 PPP2R5CQ13362 524 aa23.69■■□□□ 1.38
ATG4D-201ENST00000309469 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.69■■□□□ 1.381e-19■□□□□ 9.9
ATG4D-201ENST00000309469 MXRA8Q9BRK3 442 aa23.69■■□□□ 1.38
ATG4D-201ENST00000309469 MAGEC2Q9UBF1 373 aaPredicted RBP23.69■■□□□ 1.38
ATG4D-201ENST00000309469 PRKG1Q13976 671 aa23.69■■□□□ 1.38
ATG4D-201ENST00000309469 CCDC65Q8IXS2 484 aa23.69■■□□□ 1.38
ATG4D-201ENST00000309469 KCTD17Q8N5Z5 321 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms