RNA–Protein interactions for RNA: ENST00000308664.10

ATP2A2-201, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2A2, Length 4,453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2-201ENST00000308664 CLGNO14967 610 aa19.84■□□□□ 0.77
ATP2A2-201ENST00000308664 CHUKO15111 745 aa19.84■□□□□ 0.77
ATP2A2-201ENST00000308664 TTLL1O95922 423 aa19.84■□□□□ 0.77
ATP2A2-201ENST00000308664 FMR1Q06787 632 aaKnown RBP eCLIP19.84■□□□□ 0.778e-12■□□□□ 9.8
ATP2A2-201ENST00000308664 PABPC4Q13310 644 aaKnown RBP eCLIP19.84■□□□□ 0.773e-17■□□□□ 11.2
ATP2A2-201ENST00000308664 PPP2R5EQ16537 467 aa19.84■□□□□ 0.77
ATP2A2-201ENST00000308664 TXNRD1Q16881 649 aa19.84■□□□□ 0.77
ATP2A2-201ENST00000308664 XKR9Q5GH70 373 aa19.84■□□□□ 0.77
ATP2A2-201ENST00000308664 TTLL6Q8N841 843 aa19.84■□□□□ 0.77
ATP2A2-201ENST00000308664 SH3RF3Q8TEJ3 882 aaPredicted RBP19.84■□□□□ 0.77
ATP2A2-201ENST00000308664 LARP4BQ92615 738 aaKnown RBP19.84■□□□□ 0.77
ATP2A2-201ENST00000308664 POLR1AO95602 1720 aaPredicted RBP19.83■□□□□ 0.77
ATP2A2-201ENST00000308664 SUN1O94901 812 aa19.83■□□□□ 0.77
ATP2A2-201ENST00000308664 FKBP3Q00688 224 aaKnown RBP19.83■□□□□ 0.77
ATP2A2-201ENST00000308664 EEPD1Q7L9B9 569 aa19.83■□□□□ 0.77
ATP2A2-201ENST00000308664 MB21D2Q8IYB1 491 aaPredicted RBP19.83■□□□□ 0.77
ATP2A2-201ENST00000308664 CCDC127Q96BQ5 260 aa19.83■□□□□ 0.77
ATP2A2-201ENST00000308664 TSNARE1Q96NA8 513 aa19.83■□□□□ 0.77
ATP2A2-201ENST00000308664 PTPN22Q9Y2R2 807 aa19.83■□□□□ 0.77
ATP2A2-201ENST00000308664 TXNDC9O14530 226 aa19.83■□□□□ 0.77
ATP2A2-201ENST00000308664 NMT2O60551 498 aa19.83■□□□□ 0.77
ATP2A2-201ENST00000308664 ATP1A1P05023 1023 aaKnown RBP19.83■□□□□ 0.77
ATP2A2-201ENST00000308664 AGTPBP1Q9UPW5 1226 aa19.83■□□□□ 0.77
ATP2A2-201ENST00000308664 KIAA1024Q9UPX6 916 aa19.83■□□□□ 0.77
ATP2A2-201ENST00000308664 TNS3Q68CZ2 1445 aa19.83■□□□□ 0.76
ATP2A2-201ENST00000308664 COL15A1P39059 1388 aa19.83■□□□□ 0.76
ATP2A2-201ENST00000308664 PLEKHA8P1O95397 391 aa19.83■□□□□ 0.76
ATP2A2-201ENST00000308664 TNNI1P19237 187 aa19.83■□□□□ 0.76
ATP2A2-201ENST00000308664 HSPA1LP34931 641 aa19.83■□□□□ 0.76
ATP2A2-201ENST00000308664 RASSF2P50749 326 aa19.83■□□□□ 0.76
ATP2A2-201ENST00000308664 NFIXQ14938 502 aa19.83■□□□□ 0.76
ATP2A2-201ENST00000308664 BRDTQ58F21 947 aaPredicted RBP19.83■□□□□ 0.76
ATP2A2-201ENST00000308664 FAM47CQ5HY64 1035 aa19.83■□□□□ 0.76
ATP2A2-201ENST00000308664 L2HGDHQ9H9P8 463 aa19.83■□□□□ 0.76
ATP2A2-201ENST00000308664 RNF14Q9UBS8 474 aa19.83■□□□□ 0.76
ATP2A2-201ENST00000308664 FAM102BQ5T8I3 360 aa19.82■□□□□ 0.76
ATP2A2-201ENST00000308664 TBC1D1Q86TI0 1168 aaPredicted RBP19.82■□□□□ 0.76
ATP2A2-201ENST00000308664 CHP1Q99653 195 aa19.82■□□□□ 0.76
ATP2A2-201ENST00000308664 MRPL11Q9Y3B7 192 aaKnown RBP19.82■□□□□ 0.76
ATP2A2-201ENST00000308664 CDC42BPBQ9Y5S2 1711 aa19.82■□□□□ 0.76
ATP2A2-201ENST00000308664 PLCG1P19174 1290 aa19.82■□□□□ 0.76
ATP2A2-201ENST00000308664 PRCPP42785 496 aa19.82■□□□□ 0.76
ATP2A2-201ENST00000308664 CCDC13Q8IYE1 715 aa19.82■□□□□ 0.76
ATP2A2-201ENST00000308664 ISCA1Q9BUE6 129 aa19.82■□□□□ 0.76
ATP2A2-201ENST00000308664 THAP9Q9H5L6 903 aa19.82■□□□□ 0.76
ATP2A2-201ENST00000308664 THAP12O43422 761 aa19.82■□□□□ 0.76
ATP2A2-201ENST00000308664 N4BP1O75113 896 aaKnown RBP19.82■□□□□ 0.76
ATP2A2-201ENST00000308664 NPR1P16066 1061 aa19.82■□□□□ 0.76
ATP2A2-201ENST00000308664 ADCY8P40145 1251 aa19.82■□□□□ 0.76
ATP2A2-201ENST00000308664 CLUL1Q15846 466 aa19.82■□□□□ 0.76
ATP2A2-201ENST00000308664 TBCKQ8TEA7 893 aa19.82■□□□□ 0.76
ATP2A2-201ENST00000308664 WHAMMQ8TF30 809 aa19.82■□□□□ 0.76
ATP2A2-201ENST00000308664 CD209Q9NNX6 404 aa19.82■□□□□ 0.76
ATP2A2-201ENST00000308664 TXNDC16Q9P2K2 825 aa19.82■□□□□ 0.76
ATP2A2-201ENST00000308664 PLAAQ9Y263 795 aa19.82■□□□□ 0.76
ATP2A2-201ENST00000308664 LGALS16A8MUM7 142 aa19.82■□□□□ 0.76
ATP2A2-201ENST00000308664 EN1Q05925 392 aaPredicted RBP19.82■□□□□ 0.76
ATP2A2-201ENST00000308664 NKX1-1Q15270 411 aaPredicted RBP19.82■□□□□ 0.76
ATP2A2-201ENST00000308664 NFRKBQ6P4R8 1299 aa19.82■□□□□ 0.76
ATP2A2-201ENST00000308664 TC2NQ8N9U0 490 aa19.82■□□□□ 0.76
ATP2A2-201ENST00000308664 RNF169Q8NCN4 708 aa19.82■□□□□ 0.76
ATP2A2-201ENST00000308664 KANSL2Q9H9L4 492 aa19.82■□□□□ 0.76
ATP2A2-201ENST00000308664 FHOD1Q9Y613 1164 aa19.82■□□□□ 0.76
ATP2A2-201ENST00000308664 MADDQ8WXG6 1647 aa19.82■□□□□ 0.76
ATP2A2-201ENST00000308664 NR2F2P24468 414 aa19.81■□□□□ 0.76
ATP2A2-201ENST00000308664 CDK8P49336 464 aa19.81■□□□□ 0.76
ATP2A2-201ENST00000308664 RAD9BQ6WBX8 426 aa19.81■□□□□ 0.76
ATP2A2-201ENST00000308664 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.81■□□□□ 0.76
ATP2A2-201ENST00000308664 EXOSC10Q01780 885 aaKnown RBP19.81■□□□□ 0.76
ATP2A2-201ENST00000308664 CCDC93Q567U6 631 aa19.81■□□□□ 0.76
ATP2A2-201ENST00000308664 AP1ARQ63HQ0 302 aa19.81■□□□□ 0.76
ATP2A2-201ENST00000308664 ACTR5Q9H9F9 607 aaPredicted RBP19.81■□□□□ 0.76
ATP2A2-201ENST00000308664 HMGB1P1B2RPK0 211 aaPredicted RBP19.8■□□□□ 0.76
ATP2A2-201ENST00000308664 H2AFXP16104 143 aaPredicted RBP19.8■□□□□ 0.76
ATP2A2-201ENST00000308664 UBE2SQ16763 222 aa19.8■□□□□ 0.76
ATP2A2-201ENST00000308664 GPATCH4Q5T3I0 446 aaKnown RBP19.8■□□□□ 0.76
ATP2A2-201ENST00000308664 SREK1Q8WXA9 508 aaKnown RBP19.8■□□□□ 0.76
ATP2A2-201ENST00000308664 PCDHA4Q9UN74 947 aa19.8■□□□□ 0.76
ATP2A2-201ENST00000308664 ABCC12Q96J65 1359 aa19.8■□□□□ 0.76
ATP2A2-201ENST00000308664 FXR1P51114 621 aaKnown RBP eCLIP19.8■□□□□ 0.762e-6■■■□□ 18.7
ATP2A2-201ENST00000308664 FBXW10Q5XX13 1052 aa19.8■□□□□ 0.76
ATP2A2-201ENST00000308664 FAM178BQ8IXR5 827 aa19.8■□□□□ 0.76
ATP2A2-201ENST00000308664 MMS19Q96T76 1030 aa19.8■□□□□ 0.76
ATP2A2-201ENST00000308664 CUEDC2Q9H467 287 aa19.8■□□□□ 0.76
ATP2A2-201ENST00000308664 AS3MTQ9HBK9 375 aa19.8■□□□□ 0.76
ATP2A2-201ENST00000308664 FAM114A2Q9NRY5 505 aa19.8■□□□□ 0.76
ATP2A2-201ENST00000308664 C1orf167Q5SNV9 1468 aa19.8■□□□□ 0.76
ATP2A2-201ENST00000308664 UBN2Q6ZU65 1347 aa19.8■□□□□ 0.76
ATP2A2-201ENST00000308664 LOC102724159A0A0B4J2E5 919 aa19.8■□□□□ 0.76
ATP2A2-201ENST00000308664 NCK2O43639 380 aa19.8■□□□□ 0.76
ATP2A2-201ENST00000308664 CNGA1P29973 690 aa19.8■□□□□ 0.76
ATP2A2-201ENST00000308664 IGBP1P78318 339 aa19.8■□□□□ 0.76
ATP2A2-201ENST00000308664 MESDQ14696 234 aa19.8■□□□□ 0.76
ATP2A2-201ENST00000308664 PWP2Q15269 919 aaKnown RBP19.8■□□□□ 0.76
ATP2A2-201ENST00000308664 KRT26Q7Z3Y9 468 aa19.8■□□□□ 0.76
ATP2A2-201ENST00000308664 ENGASEQ8NFI3 743 aa19.8■□□□□ 0.76
ATP2A2-201ENST00000308664 FERMT1Q9BQL6 677 aa19.8■□□□□ 0.76
ATP2A2-201ENST00000308664 TRPC6Q9Y210 931 aa19.8■□□□□ 0.76
ATP2A2-201ENST00000308664 MEIS1O00470 390 aa19.8■□□□□ 0.76
ATP2A2-201ENST00000308664 PRPF3O43395 683 aaKnown RBP19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms