RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 POTEGQ6S5H5 508 aa25.1■■□□□ 1.61
PDLIM2-202ENST00000308354 POTEEQ6S8J3 1075 aa25.1■■□□□ 1.61
PDLIM2-202ENST00000308354 APTXQ7Z2E3 356 aaKnown RBP25.1■■□□□ 1.61
PDLIM2-202ENST00000308354 DDX12PQ92771 950 aa25.1■■□□□ 1.61
PDLIM2-202ENST00000308354 FAM20AQ96MK3 541 aa25.1■■□□□ 1.61
PDLIM2-202ENST00000308354 CTDP1Q9Y5B0 961 aaPredicted RBP25.1■■□□□ 1.61
PDLIM2-202ENST00000308354 DYNC1I1O14576 645 aa25.09■■□□□ 1.61
PDLIM2-202ENST00000308354 USP2O75604 605 aaPredicted RBP25.09■■□□□ 1.61
PDLIM2-202ENST00000308354 IDEP14735 1019 aa25.09■■□□□ 1.61
PDLIM2-202ENST00000308354 NYAP1Q6ZVC0 841 aa25.09■■□□□ 1.61
PDLIM2-202ENST00000308354 SLC39A2Q9NP94 309 aa25.09■■□□□ 1.61
PDLIM2-202ENST00000308354 KCND1Q9NSA2 647 aa25.09■■□□□ 1.61
PDLIM2-202ENST00000308354 A0A1B0GTH6 734 aa25.09■■□□□ 1.61
PDLIM2-202ENST00000308354 MEIS1O00470 390 aa25.09■■□□□ 1.61
PDLIM2-202ENST00000308354 RIOK3O14730 519 aaKnown RBP25.09■■□□□ 1.61
PDLIM2-202ENST00000308354 NRDCO43847 1150 aa25.09■■□□□ 1.61
PDLIM2-202ENST00000308354 HSD17B4P51659 736 aa25.09■■□□□ 1.61
PDLIM2-202ENST00000308354 NR1I3Q14994 352 aa25.09■■□□□ 1.61
PDLIM2-202ENST00000308354 HYIQ5T013 277 aa25.09■■□□□ 1.61
PDLIM2-202ENST00000308354 SPECC1LQ69YQ0 1117 aa25.09■■□□□ 1.61
PDLIM2-202ENST00000308354 CATSPER3Q86XQ3 398 aa25.09■■□□□ 1.61
PDLIM2-202ENST00000308354 CCDC47Q96A33 483 aaKnown RBP25.09■■□□□ 1.61
PDLIM2-202ENST00000308354 NT5C3AQ9H0P0 336 aa25.09■■□□□ 1.61
PDLIM2-202ENST00000308354 KDM3AQ9Y4C1 1321 aa25.08■■□□□ 1.61
PDLIM2-202ENST00000308354 TBX2Q13207 712 aaPredicted RBP25.08■■□□□ 1.61
PDLIM2-202ENST00000308354 VAV3Q9UKW4 847 aa25.08■■□□□ 1.61
PDLIM2-202ENST00000308354 VWA5AO00534 786 aa25.08■■□□□ 1.6
PDLIM2-202ENST00000308354 CYP4A11Q02928 519 aa25.08■■□□□ 1.6
PDLIM2-202ENST00000308354 KIAA0895Q8NCT3 520 aa25.08■■□□□ 1.6
PDLIM2-202ENST00000308354 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.08■■□□□ 1.69e-7■□□□□ 8.4
PDLIM2-202ENST00000308354 DCPSQ96C86 337 aaKnown RBP25.08■■□□□ 1.6
PDLIM2-202ENST00000308354 EEF2KMTQ96G04 330 aa25.08■■□□□ 1.6
PDLIM2-202ENST00000308354 TEX33O43247 280 aa25.07■■□□□ 1.6
PDLIM2-202ENST00000308354 ZBED4O75132 1171 aa25.07■■□□□ 1.6
PDLIM2-202ENST00000308354 PTPN14Q15678 1187 aa25.07■■□□□ 1.6
PDLIM2-202ENST00000308354 CEP55Q53EZ4 464 aa25.07■■□□□ 1.6
PDLIM2-202ENST00000308354 EML1O00423 815 aa25.06■■□□□ 1.6
PDLIM2-202ENST00000308354 CHMP2AO43633 222 aa25.06■■□□□ 1.6
PDLIM2-202ENST00000308354 GTF2F1P35269 517 aaKnown RBP eCLIP25.06■■□□□ 1.6
PDLIM2-202ENST00000308354 PSMC6P62333 389 aa25.06■■□□□ 1.6
PDLIM2-202ENST00000308354 RAD51AP2Q09MP3 1159 aa25.06■■□□□ 1.6
PDLIM2-202ENST00000308354 STIM1Q13586 685 aa25.06■■□□□ 1.6
PDLIM2-202ENST00000308354 CEP135Q66GS9 1140 aa25.06■■□□□ 1.6
PDLIM2-202ENST00000308354 UNC13DQ70J99 1090 aa25.06■■□□□ 1.6
PDLIM2-202ENST00000308354 SULF1Q8IWU6 871 aa25.06■■□□□ 1.6
PDLIM2-202ENST00000308354 IL31RAQ8NI17 732 aa25.06■■□□□ 1.6
PDLIM2-202ENST00000308354 TSC1Q92574 1164 aa25.06■■□□□ 1.6
PDLIM2-202ENST00000308354 TMX1Q9H3N1 280 aa25.06■■□□□ 1.6
PDLIM2-202ENST00000308354 EHMT1Q9H9B1 1298 aa25.06■■□□□ 1.6
PDLIM2-202ENST00000308354 RIPK3Q9Y572 518 aa25.06■■□□□ 1.6
PDLIM2-202ENST00000308354 PSMA7O14818 248 aa25.06■■□□□ 1.6
PDLIM2-202ENST00000308354 PLA2G4BP0C869 781 aa25.06■■□□□ 1.6
PDLIM2-202ENST00000308354 SPATA31C1P0DKV0 1188 aa25.06■■□□□ 1.6
PDLIM2-202ENST00000308354 ARP10275 920 aa25.06■■□□□ 1.6
PDLIM2-202ENST00000308354 KCNJ6P48051 423 aa25.06■■□□□ 1.6
PDLIM2-202ENST00000308354 CACNB1Q02641 598 aaPredicted RBP25.06■■□□□ 1.6
PDLIM2-202ENST00000308354 HAUS3Q68CZ6 603 aa25.06■■□□□ 1.6
PDLIM2-202ENST00000308354 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.06■■□□□ 1.6
PDLIM2-202ENST00000308354 CCDC112Q8NEF3 446 aa25.06■■□□□ 1.6
PDLIM2-202ENST00000308354 ZNF592Q92610 1267 aa25.06■■□□□ 1.6
PDLIM2-202ENST00000308354 PITPNM2Q9BZ72 1349 aa25.06■■□□□ 1.6
PDLIM2-202ENST00000308354 NPHP3-ACAD11A0A0J9YXS1 232 aa25.05■■□□□ 1.6
PDLIM2-202ENST00000308354 VGLL4Q14135 290 aa25.05■■□□□ 1.6
PDLIM2-202ENST00000308354 TEX2Q8IWB9 1127 aa25.05■■□□□ 1.6
PDLIM2-202ENST00000308354 CNKSR2Q8WXI2 1034 aa25.05■■□□□ 1.6
PDLIM2-202ENST00000308354 TRERF1Q96PN7 1200 aa25.05■■□□□ 1.6
PDLIM2-202ENST00000308354 PURBQ96QR8 312 aaKnown RBP25.05■■□□□ 1.6
PDLIM2-202ENST00000308354 LRCH2Q5VUJ6 765 aa25.05■■□□□ 1.6
PDLIM2-202ENST00000308354 CNNM4Q6P4Q7 775 aa25.05■■□□□ 1.6
PDLIM2-202ENST00000308354 ERMNQ8TAM6 284 aa25.05■■□□□ 1.6
PDLIM2-202ENST00000308354 PPP1R13BQ96KQ4 1090 aa25.05■■□□□ 1.6
PDLIM2-202ENST00000308354 RGL1Q9NZL6 768 aa25.05■■□□□ 1.6
PDLIM2-202ENST00000308354 ADD3Q9UEY8 706 aaKnown RBP25.05■■□□□ 1.6
PDLIM2-202ENST00000308354 AFG3L2Q9Y4W6 797 aa25.05■■□□□ 1.6
PDLIM2-202ENST00000308354 RPS6P62753 249 aaKnown RBP25.04■■□□□ 1.6
PDLIM2-202ENST00000308354 MCF2L2Q86YR7 1114 aa25.04■■□□□ 1.6
PDLIM2-202ENST00000308354 GLIS3Q8NEA6 775 aa25.04■■□□□ 1.6
PDLIM2-202ENST00000308354 DNAJC19Q96DA6 116 aa25.04■■□□□ 1.6
PDLIM2-202ENST00000308354 TRIM47Q96LD4 638 aa25.04■■□□□ 1.6
PDLIM2-202ENST00000308354 PKD2L1Q9P0L9 805 aa25.04■■□□□ 1.6
PDLIM2-202ENST00000308354 PVALEFA0A1B0GWK0 134 aa25.04■■□□□ 1.6
PDLIM2-202ENST00000308354 RPA1P27694 616 aa25.04■■□□□ 1.6
PDLIM2-202ENST00000308354 RBM10P98175 930 aaKnown RBP25.04■■□□□ 1.6
PDLIM2-202ENST00000308354 KRT31Q15323 416 aa25.04■■□□□ 1.6
PDLIM2-202ENST00000308354 OTOP1Q7RTM1 612 aa25.04■■□□□ 1.6
PDLIM2-202ENST00000308354 KRT26Q7Z3Y9 468 aa25.04■■□□□ 1.6
PDLIM2-202ENST00000308354 TMEM139Q8IV31 216 aa25.04■■□□□ 1.6
PDLIM2-202ENST00000308354 SYTL5Q8TDW5 730 aaPredicted RBP25.04■■□□□ 1.6
PDLIM2-202ENST00000308354 SNCAIPQ9Y6H5 919 aa25.04■■□□□ 1.6
PDLIM2-202ENST00000308354 KCNJ18B7U540 433 aa25.03■■□□□ 1.6
PDLIM2-202ENST00000308354 C19orf81C9J6K1 198 aa25.03■■□□□ 1.6
PDLIM2-202ENST00000308354 PSMD10O75832 226 aa25.03■■□□□ 1.6
PDLIM2-202ENST00000308354 ITGB5P18084 799 aa25.03■■□□□ 1.6
PDLIM2-202ENST00000308354 ADKP55263 362 aaKnown RBP25.03■■□□□ 1.6
PDLIM2-202ENST00000308354 SEMA3FQ13275 785 aa25.03■■□□□ 1.6
PDLIM2-202ENST00000308354 PABPC4Q13310 644 aaKnown RBP eCLIP25.03■■□□□ 1.6
PDLIM2-202ENST00000308354 KCNJ12Q14500 433 aa25.03■■□□□ 1.6
PDLIM2-202ENST00000308354 NOL9Q5SY16 702 aaKnown RBP25.03■■□□□ 1.6
PDLIM2-202ENST00000308354 TTI2Q6NXR4 508 aa25.03■■□□□ 1.6
PDLIM2-202ENST00000308354 NSMFQ6X4W1 530 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms