RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 PHACTR1Q9C0D0 580 aa11.47□□□□□ -0.57
MSRB3-201ENST00000308259 MROH5Q6ZUA9 1318 aa11.47□□□□□ -0.57
MSRB3-201ENST00000308259 MAGEB6P1A0A0J9YX57 407 aa11.47□□□□□ -0.57
MSRB3-201ENST00000308259 ROR2Q01974 943 aaKnown RBP11.47□□□□□ -0.57
MSRB3-201ENST00000308259 CCDC96Q2M329 555 aa11.47□□□□□ -0.57
MSRB3-201ENST00000308259 FAM182BQ5T319 152 aa11.47□□□□□ -0.57
MSRB3-201ENST00000308259 RRAGBQ5VZM2 374 aa11.47□□□□□ -0.57
MSRB3-201ENST00000308259 C3orf67Q6ZVT6 689 aa11.47□□□□□ -0.57
MSRB3-201ENST00000308259 TMC4Q7Z404 712 aa11.47□□□□□ -0.57
MSRB3-201ENST00000308259 ZNF804AQ7Z570 1209 aa11.47□□□□□ -0.57
MSRB3-201ENST00000308259 CNKSR1Q969H4 720 aa11.47□□□□□ -0.57
MSRB3-201ENST00000308259 JAKMIP2Q96AA8 810 aa11.47□□□□□ -0.57
MSRB3-201ENST00000308259 ZNF287Q9HBT7 754 aa11.47□□□□□ -0.57
MSRB3-201ENST00000308259 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.47□□□□□ -0.57
MSRB3-201ENST00000308259 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.46□□□□□ -0.57
MSRB3-201ENST00000308259 AHCYL1O43865 530 aa11.46□□□□□ -0.57
MSRB3-201ENST00000308259 CYP2D6P10635 497 aa11.46□□□□□ -0.57
MSRB3-201ENST00000308259 KRT2P35908 639 aa11.46□□□□□ -0.57
MSRB3-201ENST00000308259 USP14P54578 494 aa11.46□□□□□ -0.57
MSRB3-201ENST00000308259 ALX1Q15699 326 aa11.46□□□□□ -0.57
MSRB3-201ENST00000308259 SLC51AQ86UW1 340 aa11.46□□□□□ -0.57
MSRB3-201ENST00000308259 ZNF512BQ96KM6 892 aaPredicted RBP11.46□□□□□ -0.57
MSRB3-201ENST00000308259 FGD4Q96M96 766 aa11.46□□□□□ -0.57
MSRB3-201ENST00000308259 TAOK3Q9H2K8 898 aa11.46□□□□□ -0.57
MSRB3-201ENST00000308259 TRIM10Q9UDY6 481 aa11.46□□□□□ -0.57
MSRB3-201ENST00000308259 RAB21Q9UL25 225 aa11.46□□□□□ -0.57
MSRB3-201ENST00000308259 PAIP2BQ9ULR5 123 aaKnown RBP11.46□□□□□ -0.57
MSRB3-201ENST00000308259 CEP131Q9UPN4 1083 aa11.46□□□□□ -0.57
MSRB3-201ENST00000308259 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.46□□□□□ -0.57
MSRB3-201ENST00000308259 KLRK1P26718 216 aa11.46□□□□□ -0.57
MSRB3-201ENST00000308259 DYNC1I2Q13409 638 aaKnown RBP11.46□□□□□ -0.57
MSRB3-201ENST00000308259 CUL4BQ13620 913 aa11.46□□□□□ -0.57
MSRB3-201ENST00000308259 TXNRD1Q16881 649 aa11.46□□□□□ -0.57
MSRB3-201ENST00000308259 RNF10Q8N5U6 811 aaKnown RBP11.46□□□□□ -0.57
MSRB3-201ENST00000308259 DDX12PQ92771 950 aa11.46□□□□□ -0.57
MSRB3-201ENST00000308259 HDAC9Q9UKV0 1011 aa11.46□□□□□ -0.57
MSRB3-201ENST00000308259 C15orf41Q9Y2V0 281 aa11.46□□□□□ -0.57
MSRB3-201ENST00000308259 STK36Q9NRP7 1315 aa11.46□□□□□ -0.57
MSRB3-201ENST00000308259 GSTO1P78417 241 aa11.46□□□□□ -0.58
MSRB3-201ENST00000308259 ESR2Q92731 530 aa11.46□□□□□ -0.58
MSRB3-201ENST00000308259 RNPC3Q96LT9 517 aaKnown RBP11.46□□□□□ -0.58
MSRB3-201ENST00000308259 ZNF711Q9Y462 761 aa11.46□□□□□ -0.58
MSRB3-201ENST00000308259 GCOM1H8Y6P7 765 aaPredicted RBP11.46□□□□□ -0.58
MSRB3-201ENST00000308259 STXBP3O00186 592 aa11.46□□□□□ -0.58
MSRB3-201ENST00000308259 MYZAPP0CAP1 466 aa11.46□□□□□ -0.58
MSRB3-201ENST00000308259 SEPT6Q14141 434 aa11.46□□□□□ -0.58
MSRB3-201ENST00000308259 RC3H1Q5TC82 1133 aaKnown RBP11.46□□□□□ -0.58
MSRB3-201ENST00000308259 CCDC65Q8IXS2 484 aa11.46□□□□□ -0.58
MSRB3-201ENST00000308259 GPKOWQ92917 476 aaPredicted RBP eCLIP11.46□□□□□ -0.58
MSRB3-201ENST00000308259 KLHL29Q96CT2 875 aa11.46□□□□□ -0.58
MSRB3-201ENST00000308259 VCX3BQ9H321 246 aa11.46□□□□□ -0.58
MSRB3-201ENST00000308259 VCX3AQ9NNX9 186 aa11.46□□□□□ -0.58
MSRB3-201ENST00000308259 LMCD1Q9NZU5 365 aa11.46□□□□□ -0.58
MSRB3-201ENST00000308259 ZNF219Q9P2Y4 722 aaPredicted RBP11.46□□□□□ -0.58
MSRB3-201ENST00000308259 GDAQ9Y2T3 454 aa11.46□□□□□ -0.58
MSRB3-201ENST00000308259 ADGRG1Q9Y653 693 aa11.46□□□□□ -0.58
MSRB3-201ENST00000308259 A0A1B0GTH6 734 aa11.45□□□□□ -0.58
MSRB3-201ENST00000308259 TRIM49BA6NDI0 452 aa11.45□□□□□ -0.58
MSRB3-201ENST00000308259 USP17L12C9JPN9 530 aa11.45□□□□□ -0.58
MSRB3-201ENST00000308259 USP17L21D6R901 530 aa11.45□□□□□ -0.58
MSRB3-201ENST00000308259 KRT86O43790 486 aa11.45□□□□□ -0.58
MSRB3-201ENST00000308259 GBP1P32455 592 aa11.45□□□□□ -0.58
MSRB3-201ENST00000308259 MARCH10Q8NA82 808 aaPredicted RBP11.45□□□□□ -0.58
MSRB3-201ENST00000308259 UBLCP1Q8WVY7 318 aaPredicted RBP11.45□□□□□ -0.58
MSRB3-201ENST00000308259 SPATA17Q96L03 361 aa11.45□□□□□ -0.58
MSRB3-201ENST00000308259 ZSCAN10Q96SZ4 725 aaPredicted RBP11.45□□□□□ -0.58
MSRB3-201ENST00000308259 LUC7L2Q9Y383 392 aaKnown RBP11.45□□□□□ -0.58
MSRB3-201ENST00000308259 PP2D1A8MPX8 630 aa11.45□□□□□ -0.58
MSRB3-201ENST00000308259 SPA17Q15506 151 aa11.45□□□□□ -0.58
MSRB3-201ENST00000308259 APTXQ7Z2E3 356 aaKnown RBP11.45□□□□□ -0.58
MSRB3-201ENST00000308259 ZNF34Q8IZ26 560 aa11.45□□□□□ -0.58
MSRB3-201ENST00000308259 MYCBPAPQ8TBZ2 947 aa11.45□□□□□ -0.58
MSRB3-201ENST00000308259 TRAIPQ9BWF2 469 aa11.45□□□□□ -0.58
MSRB3-201ENST00000308259 BZW2Q9Y6E2 419 aaKnown RBP11.45□□□□□ -0.58
MSRB3-201ENST00000308259 ATRNO75882 1429 aa11.45□□□□□ -0.58
MSRB3-201ENST00000308259 RBM47A0AV96 593 aaKnown RBP11.45□□□□□ -0.58
MSRB3-201ENST00000308259 ATP6V1G2O95670 118 aa11.45□□□□□ -0.58
MSRB3-201ENST00000308259 GYPCP04921 128 aa11.45□□□□□ -0.58
MSRB3-201ENST00000308259 CWF19L1Q69YN2 538 aaKnown RBP11.45□□□□□ -0.58
MSRB3-201ENST00000308259 CATIPQ7Z7H3 387 aa11.45□□□□□ -0.58
MSRB3-201ENST00000308259 CNGA4Q8IV77 575 aa11.45□□□□□ -0.58
MSRB3-201ENST00000308259 CCDC197Q8NCU1 140 aa11.45□□□□□ -0.58
MSRB3-201ENST00000308259 CCHCR1Q8TD31 782 aa11.45□□□□□ -0.58
MSRB3-201ENST00000308259 FRMD4BQ9Y2L6 1034 aa11.45□□□□□ -0.58
MSRB3-201ENST00000308259 SPEF2Q9C093 1822 aa11.45□□□□□ -0.58
MSRB3-201ENST00000308259 PPP1R3GB7ZBB8 358 aa11.44□□□□□ -0.58
MSRB3-201ENST00000308259 H0Y3Z8 333 aa11.44□□□□□ -0.58
MSRB3-201ENST00000308259 NLRP5P59047 1200 aa11.44□□□□□ -0.58
MSRB3-201ENST00000308259 SEC23AQ15436 765 aa11.44□□□□□ -0.58
MSRB3-201ENST00000308259 TTC38Q5R3I4 469 aa11.44□□□□□ -0.58
MSRB3-201ENST00000308259 NT5DC1Q5TFE4 455 aa11.44□□□□□ -0.58
MSRB3-201ENST00000308259 SPATA1Q5VX52 437 aa11.44□□□□□ -0.58
MSRB3-201ENST00000308259 CYFIP2Q96F07 1278 aa11.44□□□□□ -0.58
MSRB3-201ENST00000308259 BORCS6Q96GS4 357 aa11.44□□□□□ -0.58
MSRB3-201ENST00000308259 DLGAP2Q9P1A6 1054 aa11.44□□□□□ -0.58
MSRB3-201ENST00000308259 GGT7Q9UJ14 662 aa11.44□□□□□ -0.58
MSRB3-201ENST00000308259 SCTRP47872 440 aa11.44□□□□□ -0.58
MSRB3-201ENST00000308259 IFT74Q96LB3 600 aa11.44□□□□□ -0.58
MSRB3-201ENST00000308259 ADD3Q9UEY8 706 aaKnown RBP11.44□□□□□ -0.58
MSRB3-201ENST00000308259 C2CD2Q9Y426 696 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms