RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 STRIP1Q5VSL9 837 aa12.53□□□□□ -0.4
PCDHGC3-201ENST00000308177 DAAM2Q86T65 1068 aa12.53□□□□□ -0.4
PCDHGC3-201ENST00000308177 PPM1KQ8N3J5 372 aa12.53□□□□□ -0.4
PCDHGC3-201ENST00000308177 TRIM31Q9BZY9 425 aa12.53□□□□□ -0.4
PCDHGC3-201ENST00000308177 ZNF277Q9NRM2 450 aaPredicted RBP12.53□□□□□ -0.4
PCDHGC3-201ENST00000308177 SMIM23A6NLE4 172 aa12.53□□□□□ -0.4
PCDHGC3-201ENST00000308177 DLATP10515 647 aaKnown RBP12.53□□□□□ -0.4
PCDHGC3-201ENST00000308177 CD19P15391 556 aa12.53□□□□□ -0.4
PCDHGC3-201ENST00000308177 POLGP54098 1239 aaPredicted RBP12.53□□□□□ -0.4
PCDHGC3-201ENST00000308177 RIOK1Q9BRS2 568 aaKnown RBP12.53□□□□□ -0.4
PCDHGC3-201ENST00000308177 BZW2Q9Y6E2 419 aaKnown RBP12.53□□□□□ -0.4
PCDHGC3-201ENST00000308177 GPR75-ASB3A0A0A6YYF3 556 aa12.53□□□□□ -0.4
PCDHGC3-201ENST00000308177 PVALEFA0A1B0GWK0 134 aa12.53□□□□□ -0.4
PCDHGC3-201ENST00000308177 TDP2O95551 362 aa12.53□□□□□ -0.4
PCDHGC3-201ENST00000308177 RASSF7Q02833 373 aa12.53□□□□□ -0.4
PCDHGC3-201ENST00000308177 PAK2Q13177 524 aa12.53□□□□□ -0.4
PCDHGC3-201ENST00000308177 C16orf86Q6ZW13 317 aa12.53□□□□□ -0.4
PCDHGC3-201ENST00000308177 SND1Q7KZF4 910 aaKnown RBP eCLIP12.53□□□□□ -0.4
PCDHGC3-201ENST00000308177 RSPH14Q9UHP6 348 aa12.53□□□□□ -0.4
PCDHGC3-201ENST00000308177 KDM4FA0A1W2PPD8 638 aa12.52□□□□□ -0.4
PCDHGC3-201ENST00000308177 KCNK3O14649 394 aa12.52□□□□□ -0.4
PCDHGC3-201ENST00000308177 ZEB2O60315 1214 aa12.52□□□□□ -0.4
PCDHGC3-201ENST00000308177 EIF2AK2P19525 551 aaKnown RBP12.52□□□□□ -0.4
PCDHGC3-201ENST00000308177 PPP4CP60510 307 aa12.52□□□□□ -0.4
PCDHGC3-201ENST00000308177 CTTNQ14247 550 aaKnown RBP12.52□□□□□ -0.4
PCDHGC3-201ENST00000308177 SUGCTQ9HAC7 445 aa12.52□□□□□ -0.4
PCDHGC3-201ENST00000308177 LRRIQ4A6NIV6 560 aa12.52□□□□□ -0.41
PCDHGC3-201ENST00000308177 ENC1O14682 589 aa12.52□□□□□ -0.41
PCDHGC3-201ENST00000308177 NDUFA10O95299 355 aa12.52□□□□□ -0.41
PCDHGC3-201ENST00000308177 POMGNT1Q8WZA1 660 aa12.52□□□□□ -0.41
PCDHGC3-201ENST00000308177 AGXT2Q9BYV1 514 aa12.52□□□□□ -0.41
PCDHGC3-201ENST00000308177 HNRNPDLO14979 420 aaKnown RBP12.52□□□□□ -0.41
PCDHGC3-201ENST00000308177 EN1Q05925 392 aaPredicted RBP12.52□□□□□ -0.41
PCDHGC3-201ENST00000308177 DCUN1D2Q6PH85 259 aa12.52□□□□□ -0.41
PCDHGC3-201ENST00000308177 SRGAP1Q7Z6B7 1085 aa12.52□□□□□ -0.41
PCDHGC3-201ENST00000308177 CCDC170Q8IYT3 715 aa12.52□□□□□ -0.41
PCDHGC3-201ENST00000308177 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.52□□□□□ -0.41
PCDHGC3-201ENST00000308177 RABGGTAQ92696 567 aa12.52□□□□□ -0.41
PCDHGC3-201ENST00000308177 LRRC45Q96CN5 670 aa12.52□□□□□ -0.41
PCDHGC3-201ENST00000308177 FAM20AQ96MK3 541 aa12.52□□□□□ -0.41
PCDHGC3-201ENST00000308177 TNS2Q63HR2 1409 aa12.52□□□□□ -0.41
PCDHGC3-201ENST00000308177 CNTNAP5Q8WYK1 1306 aa12.52□□□□□ -0.41
PCDHGC3-201ENST00000308177 KRT19P08727 400 aa12.52□□□□□ -0.41
PCDHGC3-201ENST00000308177 ZNF543Q08ER8 600 aa12.52□□□□□ -0.41
PCDHGC3-201ENST00000308177 HHIPL2Q6UWX4 724 aa12.52□□□□□ -0.41
PCDHGC3-201ENST00000308177 USP49Q70CQ1 688 aa12.52□□□□□ -0.41
PCDHGC3-201ENST00000308177 ZBTB8OSQ8IWT0 167 aa12.52□□□□□ -0.41
PCDHGC3-201ENST00000308177 CDHR1Q96JP9 859 aa12.52□□□□□ -0.41
PCDHGC3-201ENST00000308177 SLC4A9Q96Q91 983 aa12.52□□□□□ -0.41
PCDHGC3-201ENST00000308177 C1orf112Q9NSG2 853 aa12.52□□□□□ -0.41
PCDHGC3-201ENST00000308177 NRBP2Q9NSY0 501 aa12.52□□□□□ -0.41
PCDHGC3-201ENST00000308177 HERC5Q9UII4 1024 aaKnown RBP12.52□□□□□ -0.41
PCDHGC3-201ENST00000308177 TRPC6Q9Y210 931 aa12.52□□□□□ -0.41
PCDHGC3-201ENST00000308177 TTBK2Q6IQ55 1244 aa12.51□□□□□ -0.41
PCDHGC3-201ENST00000308177 CLEC10AQ8IUN9 316 aa12.51□□□□□ -0.41
PCDHGC3-201ENST00000308177 METTL13Q8N6R0 699 aa12.51□□□□□ -0.41
PCDHGC3-201ENST00000308177 SLC17A8Q8NDX2 589 aa12.51□□□□□ -0.41
PCDHGC3-201ENST00000308177 RAD54LQ92698 747 aa12.51□□□□□ -0.41
PCDHGC3-201ENST00000308177 GDAP1L1Q96MZ0 367 aa12.51□□□□□ -0.41
PCDHGC3-201ENST00000308177 GOLGA6BA6NDN3 693 aa12.51□□□□□ -0.41
PCDHGC3-201ENST00000308177 LGALS16A8MUM7 142 aa12.51□□□□□ -0.41
PCDHGC3-201ENST00000308177 E9PMD0 336 aa12.51□□□□□ -0.41
PCDHGC3-201ENST00000308177 PRPF6O94906 941 aaKnown RBP12.51□□□□□ -0.41
PCDHGC3-201ENST00000308177 MYL7Q01449 175 aa12.51□□□□□ -0.41
PCDHGC3-201ENST00000308177 CDC42EP5Q6NZY7 148 aa12.51□□□□□ -0.41
PCDHGC3-201ENST00000308177 PPP4R3CPQ6ZMV5 832 aa12.51□□□□□ -0.41
PCDHGC3-201ENST00000308177 ENGASEQ8NFI3 743 aa12.51□□□□□ -0.41
PCDHGC3-201ENST00000308177 SEPT9Q9UHD8 586 aaPredicted RBP12.51□□□□□ -0.41
PCDHGC3-201ENST00000308177 MON2Q7Z3U7 1717 aa12.51□□□□□ -0.41
PCDHGC3-201ENST00000308177 FERP16591 822 aa12.51□□□□□ -0.41
PCDHGC3-201ENST00000308177 ZNF365Q70YC5 407 aa12.51□□□□□ -0.41
PCDHGC3-201ENST00000308177 CEP170P1Q96L14 293 aa12.51□□□□□ -0.41
PCDHGC3-201ENST00000308177 ACCSQ96QU6 501 aa12.51□□□□□ -0.41
PCDHGC3-201ENST00000308177 CCSER1Q9C0I3 900 aa12.51□□□□□ -0.41
PCDHGC3-201ENST00000308177 GYS1P13807 737 aa12.5□□□□□ -0.41
PCDHGC3-201ENST00000308177 PTPROQ16827 1216 aa12.5□□□□□ -0.41
PCDHGC3-201ENST00000308177 TXNRD3Q86VQ6 643 aa12.5□□□□□ -0.41
PCDHGC3-201ENST00000308177 ZFP91Q96JP5 570 aaPredicted RBP12.5□□□□□ -0.41
PCDHGC3-201ENST00000308177 SELENOSQ9BQE4 189 aa12.5□□□□□ -0.41
PCDHGC3-201ENST00000308177 TRIM6Q9C030 488 aaPredicted RBP12.5□□□□□ -0.41
PCDHGC3-201ENST00000308177 NHEJ1Q9H9Q4 299 aaPredicted RBP12.5□□□□□ -0.41
PCDHGC3-201ENST00000308177 TUBE1Q9UJT0 475 aa12.5□□□□□ -0.41
PCDHGC3-201ENST00000308177 USTQ9Y2C2 406 aa12.5□□□□□ -0.41
PCDHGC3-201ENST00000308177 CYP27A1Q02318 531 aa12.5□□□□□ -0.41
PCDHGC3-201ENST00000308177 CLUL1Q15846 466 aa12.5□□□□□ -0.41
PCDHGC3-201ENST00000308177 PIGOQ8TEQ8 1089 aa12.5□□□□□ -0.41
PCDHGC3-201ENST00000308177 MAP3K14Q99558 947 aa12.5□□□□□ -0.41
PCDHGC3-201ENST00000308177 MXD3Q9BW11 206 aa12.5□□□□□ -0.41
PCDHGC3-201ENST00000308177 TMEM206Q9H813 350 aa12.5□□□□□ -0.41
PCDHGC3-201ENST00000308177 AGTPBP1Q9UPW5 1226 aa12.5□□□□□ -0.41
PCDHGC3-201ENST00000308177 KIF1AQ12756 1690 aa12.5□□□□□ -0.41
PCDHGC3-201ENST00000308177 POTEB3A0JP26 581 aa12.5□□□□□ -0.41
PCDHGC3-201ENST00000308177 POTECB2RU33 542 aa12.5□□□□□ -0.41
PCDHGC3-201ENST00000308177 EIF4A3P38919 411 aaKnown RBP12.5□□□□□ -0.41
PCDHGC3-201ENST00000308177 TBC1D10BQ4KMP7 808 aaPredicted RBP12.5□□□□□ -0.41
PCDHGC3-201ENST00000308177 POTEBQ6S5H4 581 aa12.5□□□□□ -0.41
PCDHGC3-201ENST00000308177 SLC7A3Q8WY07 619 aa12.5□□□□□ -0.41
PCDHGC3-201ENST00000308177 PLEKHA4Q9H4M7 779 aa12.5□□□□□ -0.41
PCDHGC3-201ENST00000308177 DDX41Q9UJV9 622 aaKnown RBP12.5□□□□□ -0.41
PCDHGC3-201ENST00000308177 TCRBV5S4A2TA0A5A2 114 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms