RNA–Protein interactions for RNA: ENST00000307712.10

SEC23A-201, Transcript of Sec23 homolog A, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23A, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-201ENST00000307712 TMEM60Q9H2L4 133 aa14.74□□□□□ -0.05
SEC23A-201ENST00000307712 SPATA31D1Q6ZQQ2 1576 aa14.74□□□□□ -0.05
SEC23A-201ENST00000307712 CALUO43852 315 aaPredicted RBP14.73□□□□□ -0.05
SEC23A-201ENST00000307712 MDH1P40925 334 aaKnown RBP14.73□□□□□ -0.05
SEC23A-201ENST00000307712 STAG2Q8N3U4 1231 aa14.73□□□□□ -0.05
SEC23A-201ENST00000307712 MMGT1Q8N4V1 131 aa14.73□□□□□ -0.05
SEC23A-201ENST00000307712 UBL4BQ8N7F7 174 aa14.73□□□□□ -0.05
SEC23A-201ENST00000307712 PIGSQ96S52 555 aa14.73□□□□□ -0.05
SEC23A-201ENST00000307712 DNAJC7Q99615 494 aa14.73□□□□□ -0.05
SEC23A-201ENST00000307712 DNM3Q9UQ16 869 aa14.73□□□□□ -0.05
SEC23A-201ENST00000307712 DAAM1Q9Y4D1 1078 aa14.73□□□□□ -0.05
SEC23A-201ENST00000307712 GSTA5Q7RTV2 222 aa14.73□□□□□ -0.05
SEC23A-201ENST00000307712 ZNF804AQ7Z570 1209 aa14.73□□□□□ -0.05
SEC23A-201ENST00000307712 LRRC47Q8N1G4 583 aaKnown RBP14.73□□□□□ -0.05
SEC23A-201ENST00000307712 COA7Q96BR5 231 aa14.73□□□□□ -0.05
SEC23A-201ENST00000307712 TRIM7Q9C029 511 aa14.73□□□□□ -0.05
SEC23A-201ENST00000307712 NBPF3Q9H094 633 aa14.73□□□□□ -0.05
SEC23A-201ENST00000307712 NT5C3AQ9H0P0 336 aa14.73□□□□□ -0.05
SEC23A-201ENST00000307712 POTEMA6NI47 508 aa14.73□□□□□ -0.05
SEC23A-201ENST00000307712 CHMP2AO43633 222 aa14.73□□□□□ -0.05
SEC23A-201ENST00000307712 ECM2O94769 699 aaPredicted RBP14.73□□□□□ -0.05
SEC23A-201ENST00000307712 SYF2O95926 243 aaKnown RBP14.73□□□□□ -0.05
SEC23A-201ENST00000307712 LRRC63Q05C16 580 aa14.73□□□□□ -0.05
SEC23A-201ENST00000307712 PPP2R5AQ15172 486 aa14.73□□□□□ -0.05
SEC23A-201ENST00000307712 DDB1Q16531 1140 aa14.73□□□□□ -0.05
SEC23A-201ENST00000307712 TPTE2Q6XPS3 522 aa14.73□□□□□ -0.05
SEC23A-201ENST00000307712 FMNL3Q8IVF7 1028 aa14.73□□□□□ -0.05
SEC23A-201ENST00000307712 RNF10Q8N5U6 811 aaKnown RBP14.73□□□□□ -0.05
SEC23A-201ENST00000307712 DDX12PQ92771 950 aa14.73□□□□□ -0.05
SEC23A-201ENST00000307712 GJA10Q969M2 543 aa14.73□□□□□ -0.05
SEC23A-201ENST00000307712 BRIP1Q9BX63 1249 aa14.73□□□□□ -0.05
SEC23A-201ENST00000307712 FRMD4BQ9Y2L6 1034 aa14.73□□□□□ -0.05
SEC23A-201ENST00000307712 PDS5AQ29RF7 1337 aaKnown RBP14.73□□□□□ -0.05
SEC23A-201ENST00000307712 RNF225M0QZC1 329 aaPredicted RBP14.73□□□□□ -0.05
SEC23A-201ENST00000307712 HLA-DOAP06340 250 aa14.73□□□□□ -0.05
SEC23A-201ENST00000307712 MECOMQ03112 1051 aa14.73□□□□□ -0.05
SEC23A-201ENST00000307712 HAUS3Q68CZ6 603 aa14.73□□□□□ -0.05
SEC23A-201ENST00000307712 AEBP2Q6ZN18 517 aaPredicted RBP14.73□□□□□ -0.05
SEC23A-201ENST00000307712 PNPLA7Q6ZV29 1317 aa14.72□□□□□ -0.05
SEC23A-201ENST00000307712 WDR17Q8IZU2 1322 aa14.72□□□□□ -0.05
SEC23A-201ENST00000307712 RHOBTB3O94955 611 aa14.72□□□□□ -0.05
SEC23A-201ENST00000307712 VPS41P49754 854 aa14.72□□□□□ -0.05
SEC23A-201ENST00000307712 ZBTB16Q05516 673 aa14.72□□□□□ -0.05
SEC23A-201ENST00000307712 ZKSCAN8Q15776 578 aaPredicted RBP14.72□□□□□ -0.05
SEC23A-201ENST00000307712 TAF1DQ9H5J8 278 aaPredicted RBP14.72□□□□□ -0.05
SEC23A-201ENST00000307712 HOMER3Q9NSC5 361 aa14.72□□□□□ -0.05
SEC23A-201ENST00000307712 STK17AQ9UEE5 414 aa14.72□□□□□ -0.05
SEC23A-201ENST00000307712 OVOS2A0A0G2JMS6 1433 aa14.72□□□□□ -0.05
SEC23A-201ENST00000307712 MYBL2P10244 700 aa14.72□□□□□ -0.05
SEC23A-201ENST00000307712 PMS1P54277 932 aaKnown RBP14.72□□□□□ -0.05
SEC23A-201ENST00000307712 GIMAP8Q8ND71 665 aaPredicted RBP14.72□□□□□ -0.05
SEC23A-201ENST00000307712 WDR66Q8TBY9 1149 aa14.72□□□□□ -0.05
SEC23A-201ENST00000307712 PBKQ96KB5 322 aa14.72□□□□□ -0.05
SEC23A-201ENST00000307712 FMO2Q99518 471 aa14.72□□□□□ -0.05
SEC23A-201ENST00000307712 ELAC2Q9BQ52 826 aaKnown RBP14.72□□□□□ -0.05
SEC23A-201ENST00000307712 FAM114A2Q9NRY5 505 aa14.72□□□□□ -0.05
SEC23A-201ENST00000307712 MYO5BQ9ULV0 1848 aa14.72□□□□□ -0.05
SEC23A-201ENST00000307712 PDE2AO00408 941 aaPredicted RBP14.72□□□□□ -0.05
SEC23A-201ENST00000307712 IL6STP40189 918 aaPredicted RBP14.72□□□□□ -0.05
SEC23A-201ENST00000307712 CUL1Q13616 776 aa14.72□□□□□ -0.05
SEC23A-201ENST00000307712 UNC13DQ70J99 1090 aa14.72□□□□□ -0.05
SEC23A-201ENST00000307712 DDX25Q9UHL0 483 aaKnown RBP14.72□□□□□ -0.05
SEC23A-201ENST00000307712 POTEJP0CG39 1038 aa14.71□□□□□ -0.05
SEC23A-201ENST00000307712 PLCG2P16885 1265 aa14.71□□□□□ -0.05
SEC23A-201ENST00000307712 TMOD1P28289 359 aa14.71□□□□□ -0.05
SEC23A-201ENST00000307712 PRDX5P30044 214 aa14.71□□□□□ -0.05
SEC23A-201ENST00000307712 HDLBPQ00341 1268 aaKnown RBP14.71□□□□□ -0.05
SEC23A-201ENST00000307712 TRIM68Q6AZZ1 485 aa14.71□□□□□ -0.05
SEC23A-201ENST00000307712 DDX42Q86XP3 938 aaKnown RBP eCLIP14.71□□□□□ -0.05
SEC23A-201ENST00000307712 SIGLEC1Q9BZZ2 1709 aa14.71□□□□□ -0.05
SEC23A-201ENST00000307712 FBXL5Q9UKA1 691 aa14.71□□□□□ -0.05
SEC23A-201ENST00000307712 EEF2P13639 858 aaKnown RBP14.71□□□□□ -0.05
SEC23A-201ENST00000307712 CTNNA2P26232 953 aa14.71□□□□□ -0.05
SEC23A-201ENST00000307712 ADCY1Q08828 1119 aa14.71□□□□□ -0.05
SEC23A-201ENST00000307712 SLC44A5Q8NCS7 719 aa14.71□□□□□ -0.05
SEC23A-201ENST00000307712 CD248Q9HCU0 757 aa14.71□□□□□ -0.05
SEC23A-201ENST00000307712 SLIT1O75093 1534 aa14.71□□□□□ -0.05
SEC23A-201ENST00000307712 JCADQ9P266 1359 aa14.71□□□□□ -0.05
SEC23A-201ENST00000307712 FANCGO15287 622 aa14.71□□□□□ -0.06
SEC23A-201ENST00000307712 STX2P32856 288 aa14.71□□□□□ -0.06
SEC23A-201ENST00000307712 TROAPQ12815 778 aa14.71□□□□□ -0.06
SEC23A-201ENST00000307712 MYCT1Q8N699 235 aa14.71□□□□□ -0.06
SEC23A-201ENST00000307712 DCP1AQ9NPI6 582 aaPredicted RBP14.71□□□□□ -0.06
SEC23A-201ENST00000307712 GFPT2O94808 682 aa14.7□□□□□ -0.06
SEC23A-201ENST00000307712 FGGP02679 453 aa14.7□□□□□ -0.06
SEC23A-201ENST00000307712 PPP2R2AP63151 447 aa14.7□□□□□ -0.06
SEC23A-201ENST00000307712 CYP4A11Q02928 519 aa14.7□□□□□ -0.06
SEC23A-201ENST00000307712 PABPC4Q13310 644 aaKnown RBP eCLIP14.7□□□□□ -0.06
SEC23A-201ENST00000307712 PDXDC1Q6P996 788 aa14.7□□□□□ -0.06
SEC23A-201ENST00000307712 MAEAQ7L5Y9 396 aa14.7□□□□□ -0.06
SEC23A-201ENST00000307712 CROCCP2Q86T23 111 aa14.7□□□□□ -0.06
SEC23A-201ENST00000307712 HVCN1Q96D96 273 aa14.7□□□□□ -0.06
SEC23A-201ENST00000307712 PLA2G12BQ9BX93 195 aa14.7□□□□□ -0.06
SEC23A-201ENST00000307712 CCSER1Q9C0I3 900 aa14.7□□□□□ -0.06
SEC23A-201ENST00000307712 PTPN22Q9Y2R2 807 aa14.7□□□□□ -0.06
SEC23A-201ENST00000307712 DIP2AQ14689 1571 aa14.7□□□□□ -0.06
SEC23A-201ENST00000307712 DAPK3O43293 454 aa14.7□□□□□ -0.06
SEC23A-201ENST00000307712 CYP2J2P51589 502 aa14.7□□□□□ -0.06
SEC23A-201ENST00000307712 PDXDC2PQ6P474 469 aa14.7□□□□□ -0.06
SEC23A-201ENST00000307712 KLHL29Q96CT2 875 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms