RNA–Protein interactions for RNA: ENST00000307179.8

USP8-201, Transcript of ubiquitin specific peptidase 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP8, Length 4,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-201ENST00000307179 HDAC7Q8WUI4 952 aa5.91□□□□□ -1.46
USP8-201ENST00000307179 PCMTD1Q96MG8 357 aaPredicted RBP5.91□□□□□ -1.46
USP8-201ENST00000307179 RUNDC3BQ96NL0 473 aa5.91□□□□□ -1.46
USP8-201ENST00000307179 NAP1L3Q99457 506 aaPredicted RBP5.91□□□□□ -1.46
USP8-201ENST00000307179 CCDC28BQ9BUN5 200 aa5.91□□□□□ -1.46
USP8-201ENST00000307179 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.91□□□□□ -1.46
USP8-201ENST00000307179 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.91□□□□□ -1.46
USP8-201ENST00000307179 ZSWIM5Q9P217 1185 aa5.91□□□□□ -1.46
USP8-201ENST00000307179 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.91□□□□□ -1.46
USP8-201ENST00000307179 ZNF532Q9HCE3 1301 aa5.91□□□□□ -1.46
USP8-201ENST00000307179 PRAMEF22A3QJZ6 481 aa5.91□□□□□ -1.46
USP8-201ENST00000307179 CCDC169A6NNP5 214 aa5.91□□□□□ -1.46
USP8-201ENST00000307179 STXBP3O00186 592 aa5.91□□□□□ -1.46
USP8-201ENST00000307179 GLI1P08151 1106 aa5.91□□□□□ -1.46
USP8-201ENST00000307179 LTKP29376 864 aa5.91□□□□□ -1.46
USP8-201ENST00000307179 EIF4A3P38919 411 aaKnown RBP5.91□□□□□ -1.46
USP8-201ENST00000307179 GCLCP48506 637 aaPredicted RBP5.91□□□□□ -1.46
USP8-201ENST00000307179 PSMD2Q13200 908 aa5.91□□□□□ -1.46
USP8-201ENST00000307179 EZH2Q15910 746 aaKnown RBP5.91□□□□□ -1.46
USP8-201ENST00000307179 LRRC24Q50LG9 513 aa5.91□□□□□ -1.46
USP8-201ENST00000307179 KCTD16Q68DU8 428 aa5.91□□□□□ -1.46
USP8-201ENST00000307179 NAIF1Q69YI7 327 aaPredicted RBP5.91□□□□□ -1.46
USP8-201ENST00000307179 SESTD1Q86VW0 696 aa5.91□□□□□ -1.46
USP8-201ENST00000307179 SMYD4Q8IYR2 804 aaPredicted RBP5.91□□□□□ -1.46
USP8-201ENST00000307179 ATXN2LQ8WWM7 1075 aaKnown RBP5.91□□□□□ -1.46
USP8-201ENST00000307179 RIC8AQ9NPQ8 531 aa5.91□□□□□ -1.46
USP8-201ENST00000307179 PPANQ9NQ55 473 aaKnown RBP5.91□□□□□ -1.46
USP8-201ENST00000307179 ANKIB1Q9P2G1 1089 aa5.91□□□□□ -1.46
USP8-201ENST00000307179 PARP2Q9UGN5 583 aa5.91□□□□□ -1.46
USP8-201ENST00000307179 CNOT7Q9UIV1 285 aaKnown RBP5.91□□□□□ -1.46
USP8-201ENST00000307179 KIF13AQ9H1H9 1805 aa5.91□□□□□ -1.46
USP8-201ENST00000307179 COL1A1P02452 1464 aaPredicted RBP5.9□□□□□ -1.46
USP8-201ENST00000307179 PVALEFA0A1B0GWK0 134 aa5.9□□□□□ -1.46
USP8-201ENST00000307179 PGRMC1O00264 195 aaKnown RBP5.9□□□□□ -1.46
USP8-201ENST00000307179 PPFIA2O75334 1257 aa5.9□□□□□ -1.46
USP8-201ENST00000307179 NPTXRO95502 500 aa5.9□□□□□ -1.46
USP8-201ENST00000307179 HSPA6P17066 643 aa5.9□□□□□ -1.46
USP8-201ENST00000307179 ATP5DP30049 168 aa5.9□□□□□ -1.46
USP8-201ENST00000307179 KIF5BP33176 963 aa5.9□□□□□ -1.46
USP8-201ENST00000307179 ATP11AP98196 1134 aa5.9□□□□□ -1.46
USP8-201ENST00000307179 FUT2Q10981 343 aa5.9□□□□□ -1.46
USP8-201ENST00000307179 SEC23AQ15436 765 aa5.9□□□□□ -1.46
USP8-201ENST00000307179 CCDC178Q5BJE1 867 aa5.9□□□□□ -1.46
USP8-201ENST00000307179 RAB11FIP4Q86YS3 637 aa5.9□□□□□ -1.46
USP8-201ENST00000307179 LMNTD2Q8IXW0 634 aa5.9□□□□□ -1.46
USP8-201ENST00000307179 SCFD2Q8WU76 684 aa5.9□□□□□ -1.46
USP8-201ENST00000307179 NSMCE1Q8WV22 266 aa5.9□□□□□ -1.46
USP8-201ENST00000307179 ZNF496Q96IT1 587 aaPredicted RBP5.9□□□□□ -1.46
USP8-201ENST00000307179 TSG101Q99816 390 aa5.9□□□□□ -1.46
USP8-201ENST00000307179 DUSP9Q99956 384 aaKnown RBP5.9□□□□□ -1.46
USP8-201ENST00000307179 ARHGAP20Q9P2F6 1191 aa5.9□□□□□ -1.46
USP8-201ENST00000307179 C10orf71Q711Q0 1435 aa5.9□□□□□ -1.46
USP8-201ENST00000307179 MROH5Q6ZUA9 1318 aa5.9□□□□□ -1.46
USP8-201ENST00000307179 FAM187AA6NFU0 413 aa5.9□□□□□ -1.46
USP8-201ENST00000307179 ZNF263O14978 683 aa5.9□□□□□ -1.46
USP8-201ENST00000307179 LMNAP02545 664 aaKnown RBP5.9□□□□□ -1.46
USP8-201ENST00000307179 NQO1P15559 274 aaKnown RBP5.9□□□□□ -1.46
USP8-201ENST00000307179 GUCY1A2P33402 732 aa5.9□□□□□ -1.46
USP8-201ENST00000307179 IFIT5Q13325 482 aaKnown RBP5.9□□□□□ -1.46
USP8-201ENST00000307179 DYNC1I2Q13409 638 aaKnown RBP5.9□□□□□ -1.46
USP8-201ENST00000307179 PKN1Q16512 942 aa5.9□□□□□ -1.46
USP8-201ENST00000307179 ODF2Q5BJF6 829 aa5.9□□□□□ -1.46
USP8-201ENST00000307179 TTC19Q6DKK2 380 aaPredicted RBP5.9□□□□□ -1.46
USP8-201ENST00000307179 TMTC3Q6ZXV5 915 aa5.9□□□□□ -1.46
USP8-201ENST00000307179 TAOK1Q7L7X3 1001 aa5.9□□□□□ -1.46
USP8-201ENST00000307179 RASGEF1CQ8N431 466 aa5.9□□□□□ -1.46
USP8-201ENST00000307179 OXER1Q8TDS5 423 aa5.9□□□□□ -1.46
USP8-201ENST00000307179 TRIM7Q9C029 511 aa5.9□□□□□ -1.46
USP8-201ENST00000307179 SLC39A2Q9NP94 309 aa5.9□□□□□ -1.46
USP8-201ENST00000307179 STK17AQ9UEE5 414 aa5.9□□□□□ -1.46
USP8-201ENST00000307179 A6NHS1 94 aa5.9□□□□□ -1.47
USP8-201ENST00000307179 RASSF10A6NK89 507 aa5.9□□□□□ -1.47
USP8-201ENST00000307179 BAG3O95817 575 aa5.9□□□□□ -1.47
USP8-201ENST00000307179 FGRP09769 529 aa5.9□□□□□ -1.47
USP8-201ENST00000307179 CNGA1P29973 690 aa5.9□□□□□ -1.47
USP8-201ENST00000307179 MCAMP43121 646 aa5.9□□□□□ -1.47
USP8-201ENST00000307179 MMP13P45452 471 aa5.9□□□□□ -1.47
USP8-201ENST00000307179 PDE6CP51160 858 aa5.9□□□□□ -1.47
USP8-201ENST00000307179 USP11P51784 963 aa5.9□□□□□ -1.47
USP8-201ENST00000307179 SEC24CP53992 1094 aa5.9□□□□□ -1.47
USP8-201ENST00000307179 SLC7A5Q01650 507 aa5.9□□□□□ -1.47
USP8-201ENST00000307179 ROR2Q01974 943 aaKnown RBP5.9□□□□□ -1.47
USP8-201ENST00000307179 BIRC2Q13490 618 aa5.9□□□□□ -1.47
USP8-201ENST00000307179 PPP1R7Q15435 360 aa5.9□□□□□ -1.47
USP8-201ENST00000307179 ZRSR2Q15696 482 aaKnown RBP5.9□□□□□ -1.47
USP8-201ENST00000307179 SKIDA1Q1XH10 827 aa5.9□□□□□ -1.47
USP8-201ENST00000307179 SLC5A9Q2M3M2 681 aa5.9□□□□□ -1.47
USP8-201ENST00000307179 STAG2Q8N3U4 1231 aa5.9□□□□□ -1.47
USP8-201ENST00000307179 SPDL1Q96EA4 605 aa5.9□□□□□ -1.47
USP8-201ENST00000307179 BICD1Q96G01 975 aa5.9□□□□□ -1.47
USP8-201ENST00000307179 MLXIPQ9HAP2 919 aa5.9□□□□□ -1.47
USP8-201ENST00000307179 AGPAT5Q9NUQ2 364 aa5.9□□□□□ -1.47
USP8-201ENST00000307179 CNTNAP5Q8WYK1 1306 aa5.89□□□□□ -1.47
USP8-201ENST00000307179 SCN7AQ01118 1682 aa5.89□□□□□ -1.47
USP8-201ENST00000307179 HNRNPCL1O60812 293 aaKnown RBP5.89□□□□□ -1.47
USP8-201ENST00000307179 SLC5A1P13866 664 aa5.89□□□□□ -1.47
USP8-201ENST00000307179 RXRBP28702 533 aa5.89□□□□□ -1.47
USP8-201ENST00000307179 CCNHP51946 323 aaPredicted RBP5.89□□□□□ -1.47
USP8-201ENST00000307179 DRG2P55039 364 aaKnown RBP5.89□□□□□ -1.47
USP8-201ENST00000307179 RPS6KA1Q15418 735 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms