RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 A6NJR5 290 aa11.71□□□□□ -0.54
SYNPO2-201ENST00000307142 CETPP11597 493 aa11.71□□□□□ -0.54
SYNPO2-201ENST00000307142 KCNJ6P48051 423 aa11.71□□□□□ -0.54
SYNPO2-201ENST00000307142 TRAPPC10P48553 1259 aa11.71□□□□□ -0.54
SYNPO2-201ENST00000307142 MAP7D1Q3KQU3 841 aa11.71□□□□□ -0.54
SYNPO2-201ENST00000307142 CEP128Q6ZU80 1094 aa11.71□□□□□ -0.54
SYNPO2-201ENST00000307142 TMEM206Q9H813 350 aa11.71□□□□□ -0.54
SYNPO2-201ENST00000307142 ASB14A6NK59 587 aa11.71□□□□□ -0.54
SYNPO2-201ENST00000307142 CYP2B6P20813 491 aa11.71□□□□□ -0.54
SYNPO2-201ENST00000307142 DDIT3P35638 169 aa11.71□□□□□ -0.54
SYNPO2-201ENST00000307142 NEDD9Q14511 834 aa11.71□□□□□ -0.54
SYNPO2-201ENST00000307142 ADGRF4Q8IZF3 695 aa11.71□□□□□ -0.54
SYNPO2-201ENST00000307142 PARVGQ9HBI0 331 aa11.71□□□□□ -0.54
SYNPO2-201ENST00000307142 METTL14Q9HCE5 456 aaKnown RBP11.71□□□□□ -0.54
SYNPO2-201ENST00000307142 RAB20Q9NX57 234 aa11.71□□□□□ -0.54
SYNPO2-201ENST00000307142 NEDD4P46934 1319 aa11.71□□□□□ -0.54
SYNPO2-201ENST00000307142 POLR2BP30876 1174 aaKnown RBP11.71□□□□□ -0.54
SYNPO2-201ENST00000307142 PSMC2P35998 433 aaKnown RBP11.71□□□□□ -0.54
SYNPO2-201ENST00000307142 CPVLQ9H3G5 476 aa11.71□□□□□ -0.54
SYNPO2-201ENST00000307142 MMP1P03956 469 aa11.7□□□□□ -0.54
SYNPO2-201ENST00000307142 RPS12P25398 132 aaKnown RBP11.7□□□□□ -0.54
SYNPO2-201ENST00000307142 PDZD4Q76G19 769 aaPredicted RBP11.7□□□□□ -0.54
SYNPO2-201ENST00000307142 RHPN2Q8IUC4 686 aa11.7□□□□□ -0.54
SYNPO2-201ENST00000307142 ZBTB9Q96C00 473 aa11.7□□□□□ -0.54
SYNPO2-201ENST00000307142 CPSF3Q9UKF6 684 aaKnown RBP11.7□□□□□ -0.54
SYNPO2-201ENST00000307142 RIOK3O14730 519 aaKnown RBP11.7□□□□□ -0.54
SYNPO2-201ENST00000307142 RHOXF2BP0C7M4 288 aa11.7□□□□□ -0.54
SYNPO2-201ENST00000307142 TMED8Q6PL24 325 aaPredicted RBP11.7□□□□□ -0.54
SYNPO2-201ENST00000307142 RBM46Q8TBY0 533 aaKnown RBP11.7□□□□□ -0.54
SYNPO2-201ENST00000307142 FAM167AQ96KS9 214 aa11.7□□□□□ -0.54
SYNPO2-201ENST00000307142 RHOXF2Q9BQY4 288 aa11.7□□□□□ -0.54
SYNPO2-201ENST00000307142 ASIC3Q9UHC3 531 aa11.7□□□□□ -0.54
SYNPO2-201ENST00000307142 GDAQ9Y2T3 454 aa11.7□□□□□ -0.54
SYNPO2-201ENST00000307142 COBLO75128 1261 aa11.7□□□□□ -0.54
SYNPO2-201ENST00000307142 PEX26Q7Z412 305 aa11.7□□□□□ -0.54
SYNPO2-201ENST00000307142 MSTO1Q9BUK6 570 aa11.7□□□□□ -0.54
SYNPO2-201ENST00000307142 PEX3P56589 373 aa11.7□□□□□ -0.54
SYNPO2-201ENST00000307142 NR5A1Q13285 461 aa11.7□□□□□ -0.54
SYNPO2-201ENST00000307142 SECISBP2LQ93073 1101 aaKnown RBP11.7□□□□□ -0.54
SYNPO2-201ENST00000307142 MFAP3P55082 362 aa11.7□□□□□ -0.54
SYNPO2-201ENST00000307142 PTK2Q05397 1052 aa11.7□□□□□ -0.54
SYNPO2-201ENST00000307142 ZBTB16Q05516 673 aa11.7□□□□□ -0.54
SYNPO2-201ENST00000307142 MICALCLQ6ZW33 695 aa11.7□□□□□ -0.54
SYNPO2-201ENST00000307142 NOP9Q86U38 636 aaKnown RBP11.7□□□□□ -0.54
SYNPO2-201ENST00000307142 POLR2FP61218 127 aaKnown RBP11.69□□□□□ -0.54
SYNPO2-201ENST00000307142 LRRC41Q15345 812 aa11.69□□□□□ -0.54
SYNPO2-201ENST00000307142 ZNF34Q8IZ26 560 aa11.69□□□□□ -0.54
SYNPO2-201ENST00000307142 PIGOQ8TEQ8 1089 aa11.69□□□□□ -0.54
SYNPO2-201ENST00000307142 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.69□□□□□ -0.54
SYNPO2-201ENST00000307142 MAGEF1Q9HAY2 307 aa11.69□□□□□ -0.54
SYNPO2-201ENST00000307142 PFDN4Q9NQP4 134 aa11.69□□□□□ -0.54
SYNPO2-201ENST00000307142 ADAMTS13Q76LX8 1427 aa11.69□□□□□ -0.54
SYNPO2-201ENST00000307142 PLA2G4BP0C869 781 aa11.69□□□□□ -0.54
SYNPO2-201ENST00000307142 PHKA2P46019 1235 aa11.69□□□□□ -0.54
SYNPO2-201ENST00000307142 COG2Q14746 738 aa11.69□□□□□ -0.54
SYNPO2-201ENST00000307142 PLCB4Q15147 1175 aa11.69□□□□□ -0.54
SYNPO2-201ENST00000307142 SCARA5Q6ZMJ2 495 aa11.69□□□□□ -0.54
SYNPO2-201ENST00000307142 FAM149B1Q96BN6 582 aa11.69□□□□□ -0.54
SYNPO2-201ENST00000307142 NT5C1BQ96P26 610 aa11.69□□□□□ -0.54
SYNPO2-201ENST00000307142 LRRC4Q9HBW1 653 aa11.69□□□□□ -0.54
SYNPO2-201ENST00000307142 CBX8Q9HC52 389 aa11.69□□□□□ -0.54
SYNPO2-201ENST00000307142 MAGEA1P43355 309 aa11.69□□□□□ -0.54
SYNPO2-201ENST00000307142 RNF139Q8WU17 664 aa11.69□□□□□ -0.54
SYNPO2-201ENST00000307142 EEF2KMTQ96G04 330 aa11.69□□□□□ -0.54
SYNPO2-201ENST00000307142 TRIM7Q9C029 511 aa11.69□□□□□ -0.54
SYNPO2-201ENST00000307142 ADARB2Q9NS39 739 aaKnown RBP11.69□□□□□ -0.54
SYNPO2-201ENST00000307142 NR2F2P24468 414 aa11.69□□□□□ -0.54
SYNPO2-201ENST00000307142 NDUFA8P51970 172 aa11.69□□□□□ -0.54
SYNPO2-201ENST00000307142 AP3B2Q13367 1082 aa11.69□□□□□ -0.54
SYNPO2-201ENST00000307142 DGKHQ86XP1 1220 aa11.69□□□□□ -0.54
SYNPO2-201ENST00000307142 SKA2Q8WVK7 121 aaPredicted RBP11.69□□□□□ -0.54
SYNPO2-201ENST00000307142 PSMB7Q99436 277 aa11.69□□□□□ -0.54
SYNPO2-201ENST00000307142 MTRQ99707 1265 aa11.69□□□□□ -0.54
SYNPO2-201ENST00000307142 TMEM39BQ9GZU3 492 aa11.69□□□□□ -0.54
SYNPO2-201ENST00000307142 PTPRUQ92729 1446 aa11.69□□□□□ -0.54
SYNPO2-201ENST00000307142 ATXN8OSP0DMR3 200 aa11.69□□□□□ -0.54
SYNPO2-201ENST00000307142 PPP2R3AQ06190 1150 aa11.69□□□□□ -0.54
SYNPO2-201ENST00000307142 C6orf163Q5TEZ5 329 aa11.69□□□□□ -0.54
SYNPO2-201ENST00000307142 KAZNQ674X7 775 aa11.69□□□□□ -0.54
SYNPO2-201ENST00000307142 USP17L6PQ6QN14 398 aa11.69□□□□□ -0.54
SYNPO2-201ENST00000307142 SYT10Q6XYQ8 523 aa11.69□□□□□ -0.54
SYNPO2-201ENST00000307142 TRIM31Q9BZY9 425 aa11.69□□□□□ -0.54
SYNPO2-201ENST00000307142 DEFB129Q9H1M3 183 aa11.69□□□□□ -0.54
SYNPO2-201ENST00000307142 ATP6V0A4Q9HBG4 840 aa11.69□□□□□ -0.54
SYNPO2-201ENST00000307142 NRXN1Q9ULB1 1477 aa11.69□□□□□ -0.54
SYNPO2-201ENST00000307142 MTX1Q13505 466 aa11.69□□□□□ -0.54
SYNPO2-201ENST00000307142 FBXO18Q8NFZ0 1043 aa11.69□□□□□ -0.54
SYNPO2-201ENST00000307142 NSRP1Q9H0G5 558 aaKnown RBP11.69□□□□□ -0.54
SYNPO2-201ENST00000307142 PNPLA6Q8IY17 1366 aa11.68□□□□□ -0.54
SYNPO2-201ENST00000307142 VAV2P52735 878 aa11.68□□□□□ -0.54
SYNPO2-201ENST00000307142 EXOC3L4Q17RC7 722 aa11.68□□□□□ -0.54
SYNPO2-201ENST00000307142 SWSAP1Q6NVH7 229 aa11.68□□□□□ -0.54
SYNPO2-201ENST00000307142 CUEDC2Q9H467 287 aa11.68□□□□□ -0.54
SYNPO2-201ENST00000307142 SLC8A2Q9UPR5 921 aa11.68□□□□□ -0.54
SYNPO2-201ENST00000307142 ZNF233A6NK53 670 aa11.68□□□□□ -0.54
SYNPO2-201ENST00000307142 CEP104O60308 925 aa11.68□□□□□ -0.54
SYNPO2-201ENST00000307142 FCGRTP55899 365 aa11.68□□□□□ -0.54
SYNPO2-201ENST00000307142 ARHGAP4P98171 946 aa11.68□□□□□ -0.54
SYNPO2-201ENST00000307142 ZNF668Q96K58 619 aaPredicted RBP11.68□□□□□ -0.54
SYNPO2-201ENST00000307142 SLC38A10Q9HBR0 1119 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms