RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 FBXL6Q8N531 539 aa13.95□□□□□ -0.18
SMIM4-201ENST00000307106 PANK1Q8TE04 598 aa13.95□□□□□ -0.18
SMIM4-201ENST00000307106 TOP1MTQ969P6 601 aa13.95□□□□□ -0.18
SMIM4-201ENST00000307106 PTPRZ1P23471 2315 aaPredicted RBP13.95□□□□□ -0.18
SMIM4-201ENST00000307106 FRMPD2Q68DX3 1309 aaPredicted RBP13.94□□□□□ -0.18
SMIM4-201ENST00000307106 ZFYP08048 801 aaPredicted RBP13.94□□□□□ -0.18
SMIM4-201ENST00000307106 ZNF286BP0CG31 522 aa13.94□□□□□ -0.18
SMIM4-201ENST00000307106 ZNF200P98182 395 aaPredicted RBP13.94□□□□□ -0.18
SMIM4-201ENST00000307106 HYAL1Q12794 435 aa13.94□□□□□ -0.18
SMIM4-201ENST00000307106 DHX37Q8IY37 1157 aaKnown RBP13.94□□□□□ -0.18
SMIM4-201ENST00000307106 NAPBQ9H115 298 aa13.94□□□□□ -0.18
SMIM4-201ENST00000307106 CD207Q9UJ71 328 aa13.94□□□□□ -0.18
SMIM4-201ENST00000307106 PNMA2Q9UL42 364 aa13.94□□□□□ -0.18
SMIM4-201ENST00000307106 MYO10Q9HD67 2058 aa13.94□□□□□ -0.18
SMIM4-201ENST00000307106 TTC3P53804 2025 aa13.93□□□□□ -0.18
SMIM4-201ENST00000307106 ZFHX2Q9C0A1 2572 aaPredicted RBP13.93□□□□□ -0.18
SMIM4-201ENST00000307106 RSPH10B2B2RC85 870 aa13.93□□□□□ -0.18
SMIM4-201ENST00000307106 HAS3O00219 553 aa13.93□□□□□ -0.18
SMIM4-201ENST00000307106 F2P00734 622 aa13.93□□□□□ -0.18
SMIM4-201ENST00000307106 RSPH10BP0C881 870 aa13.93□□□□□ -0.18
SMIM4-201ENST00000307106 CTNNB1P35222 781 aa13.93□□□□□ -0.18
SMIM4-201ENST00000307106 THPOP40225 353 aa13.93□□□□□ -0.18
SMIM4-201ENST00000307106 ZXDAP98168 799 aa13.93□□□□□ -0.18
SMIM4-201ENST00000307106 LMAN2LQ9H0V9 348 aa13.93□□□□□ -0.18
SMIM4-201ENST00000307106 IRF2BPLQ9H1B7 796 aa13.93□□□□□ -0.18
SMIM4-201ENST00000307106 ALG13Q9NP73 1137 aaKnown RBP13.93□□□□□ -0.18
SMIM4-201ENST00000307106 GPCPD1Q9NPB8 672 aa13.93□□□□□ -0.18
SMIM4-201ENST00000307106 ECHDC1Q9NTX5 307 aa13.93□□□□□ -0.18
SMIM4-201ENST00000307106 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.93□□□□□ -0.18
SMIM4-201ENST00000307106 WDR19Q8NEZ3 1342 aa13.92□□□□□ -0.18
SMIM4-201ENST00000307106 CACNA1AO00555 2505 aa13.92□□□□□ -0.18
SMIM4-201ENST00000307106 FAM186AA6NE01 2351 aa13.92□□□□□ -0.18
SMIM4-201ENST00000307106 C5orf67F2Z3F1 127 aa13.92□□□□□ -0.18
SMIM4-201ENST00000307106 GRM6O15303 877 aa13.92□□□□□ -0.18
SMIM4-201ENST00000307106 LINC01565O15544 149 aa13.92□□□□□ -0.18
SMIM4-201ENST00000307106 RANBP6O60518 1105 aaKnown RBP13.92□□□□□ -0.18
SMIM4-201ENST00000307106 GTF2F1P35269 517 aaKnown RBP eCLIP13.92□□□□□ -0.18
SMIM4-201ENST00000307106 NOVP48745 357 aa13.92□□□□□ -0.18
SMIM4-201ENST00000307106 HIC1Q14526 733 aa13.92□□□□□ -0.18
SMIM4-201ENST00000307106 FIBCD1Q8N539 461 aa13.92□□□□□ -0.18
SMIM4-201ENST00000307106 SEPT8Q92599 483 aa13.92□□□□□ -0.18
SMIM4-201ENST00000307106 ATOH1Q92858 354 aaPredicted RBP13.92□□□□□ -0.18
SMIM4-201ENST00000307106 IFIH1Q9BYX4 1025 aaKnown RBP13.92□□□□□ -0.18
SMIM4-201ENST00000307106 IGFLR1Q9H665 355 aa13.92□□□□□ -0.18
SMIM4-201ENST00000307106 INCENPQ9NQS7 918 aa13.92□□□□□ -0.18
SMIM4-201ENST00000307106 DCHS1Q96JQ0 3298 aa13.92□□□□□ -0.18
SMIM4-201ENST00000307106 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.91□□□□□ -0.18
SMIM4-201ENST00000307106 SMARCA5O60264 1052 aaPredicted RBP13.91□□□□□ -0.18
SMIM4-201ENST00000307106 RB1P06400 928 aa13.91□□□□□ -0.18
SMIM4-201ENST00000307106 VCPP55072 806 aaKnown RBP13.91□□□□□ -0.18
SMIM4-201ENST00000307106 CTDSPL2Q05D32 466 aa13.91□□□□□ -0.18
SMIM4-201ENST00000307106 SERINC5Q86VE9 423 aa13.91□□□□□ -0.18
SMIM4-201ENST00000307106 EMID1Q96A84 441 aaPredicted RBP13.91□□□□□ -0.18
SMIM4-201ENST00000307106 SEC62Q99442 399 aaKnown RBP13.91□□□□□ -0.18
SMIM4-201ENST00000307106 C11orf84Q9BUA3 381 aaPredicted RBP13.91□□□□□ -0.18
SMIM4-201ENST00000307106 LRRCC1Q9C099 1032 aa13.91□□□□□ -0.18
SMIM4-201ENST00000307106 DDX41Q9UJV9 622 aaKnown RBP13.91□□□□□ -0.18
SMIM4-201ENST00000307106 CSPG5O95196 566 aa13.9□□□□□ -0.18
SMIM4-201ENST00000307106 NDUFV1P49821 464 aa13.9□□□□□ -0.18
SMIM4-201ENST00000307106 SIGLEC14Q08ET2 396 aa13.9□□□□□ -0.18
SMIM4-201ENST00000307106 STXBP2Q15833 593 aa13.9□□□□□ -0.18
SMIM4-201ENST00000307106 USH1GQ495M9 461 aa13.9□□□□□ -0.18
SMIM4-201ENST00000307106 PPTC7Q8NI37 304 aa13.9□□□□□ -0.18
SMIM4-201ENST00000307106 IL17RAQ96F46 866 aa13.9□□□□□ -0.18
SMIM4-201ENST00000307106 TAAR1Q96RJ0 339 aa13.9□□□□□ -0.18
SMIM4-201ENST00000307106 RWDD3Q9Y3V2 267 aa13.9□□□□□ -0.18
SMIM4-201ENST00000307106 LOC730098B7Z3J9 87 aa13.89□□□□□ -0.19
SMIM4-201ENST00000307106 EYA4O95677 639 aa13.89□□□□□ -0.19
SMIM4-201ENST00000307106 PDHBP11177 359 aa13.89□□□□□ -0.19
SMIM4-201ENST00000307106 TOP1P11387 765 aaKnown RBP13.89□□□□□ -0.19
SMIM4-201ENST00000307106 AVPR2P30518 371 aa13.89□□□□□ -0.19
SMIM4-201ENST00000307106 BMPR1AP36894 532 aa13.89□□□□□ -0.19
SMIM4-201ENST00000307106 ADAM15Q13444 863 aa13.89□□□□□ -0.19
SMIM4-201ENST00000307106 LAMC2Q13753 1193 aa13.89□□□□□ -0.19
SMIM4-201ENST00000307106 RGS22Q8NE09 1264 aa13.89□□□□□ -0.19
SMIM4-201ENST00000307106 NSUN6Q8TEA1 469 aaKnown RBP13.89□□□□□ -0.19
SMIM4-201ENST00000307106 MSLNLQ96KJ4 702 aa13.89□□□□□ -0.19
SMIM4-201ENST00000307106 TMEM47Q9BQJ4 181 aa13.89□□□□□ -0.19
SMIM4-201ENST00000307106 OSBPL7Q9BZF2 842 aa13.89□□□□□ -0.19
SMIM4-201ENST00000307106 MRVI1Q9Y6F6 885 aa13.89□□□□□ -0.19
SMIM4-201ENST00000307106 RIF1Q5UIP0 2472 aaKnown RBP13.88□□□□□ -0.19
SMIM4-201ENST00000307106 H0Y858 1186 aa13.88□□□□□ -0.19
SMIM4-201ENST00000307106 MMP1P03956 469 aa13.88□□□□□ -0.19
SMIM4-201ENST00000307106 CTSHP09668 335 aa13.88□□□□□ -0.19
SMIM4-201ENST00000307106 LINC00271P0C7V0 271 aa13.88□□□□□ -0.19
SMIM4-201ENST00000307106 TSHZ3Q63HK5 1081 aa13.88□□□□□ -0.19
SMIM4-201ENST00000307106 SYTL5Q8TDW5 730 aaPredicted RBP13.88□□□□□ -0.19
SMIM4-201ENST00000307106 TBC1D5Q92609 795 aa13.88□□□□□ -0.19
SMIM4-201ENST00000307106 ATP6V0A1Q93050 837 aa13.88□□□□□ -0.19
SMIM4-201ENST00000307106 ASIC4Q96FT7 647 aa13.88□□□□□ -0.19
SMIM4-201ENST00000307106 IWS1Q96ST2 819 aa13.88□□□□□ -0.19
SMIM4-201ENST00000307106 RMDN3Q96TC7 470 aa13.88□□□□□ -0.19
SMIM4-201ENST00000307106 TLR9Q9NR96 1032 aa13.88□□□□□ -0.19
SMIM4-201ENST00000307106 ZBTB40Q9NUA8 1239 aa13.88□□□□□ -0.19
SMIM4-201ENST00000307106 COL20A1Q9P218 1284 aa13.88□□□□□ -0.19
SMIM4-201ENST00000307106 ADGRA3Q8IWK6 1321 aa13.88□□□□□ -0.19
SMIM4-201ENST00000307106 DMDP11532 3685 aa13.87□□□□□ -0.19
SMIM4-201ENST00000307106 C17orf102A2RUQ5 167 aa13.87□□□□□ -0.19
SMIM4-201ENST00000307106 PROB1E7EW31 1015 aa13.87□□□□□ -0.19
SMIM4-201ENST00000307106 PPFIA4O75335 1185 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms