RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 ANKRD40Q6AI12 368 aa14.54□□□□□ -0.08
DDX54-201ENST00000306014 SPATA31A6Q5VVP1 1343 aa14.54□□□□□ -0.08
DDX54-201ENST00000306014 LLGL1Q15334 1064 aa14.54□□□□□ -0.08
DDX54-201ENST00000306014 UNC13DQ70J99 1090 aa14.54□□□□□ -0.08
DDX54-201ENST00000306014 CROCCP2Q86T23 111 aa14.54□□□□□ -0.08
DDX54-201ENST00000306014 ADSSL1Q8N142 457 aa14.54□□□□□ -0.08
DDX54-201ENST00000306014 KIFAP3Q92845 792 aa14.54□□□□□ -0.08
DDX54-201ENST00000306014 BZW2Q9Y6E2 419 aaKnown RBP14.54□□□□□ -0.08
DDX54-201ENST00000306014 ITIH6Q6UXX5 1313 aa14.53□□□□□ -0.08
DDX54-201ENST00000306014 SPATA4Q8NEY3 305 aa14.53□□□□□ -0.08
DDX54-201ENST00000306014 CELF1Q92879 486 aaKnown RBP14.53□□□□□ -0.08
DDX54-201ENST00000306014 IMPG2Q9BZV3 1241 aa14.53□□□□□ -0.08
DDX54-201ENST00000306014 PXDNQ92626 1479 aa14.53□□□□□ -0.08
DDX54-201ENST00000306014 TCHHQ07283 1943 aa14.53□□□□□ -0.08
DDX54-201ENST00000306014 PPP1R3GB7ZBB8 358 aa14.53□□□□□ -0.08
DDX54-201ENST00000306014 VSIG1Q86XK7 387 aa14.53□□□□□ -0.08
DDX54-201ENST00000306014 FAM178BQ8IXR5 827 aa14.53□□□□□ -0.08
DDX54-201ENST00000306014 SLFN12Q8IYM2 578 aa14.53□□□□□ -0.08
DDX54-201ENST00000306014 OGFOD1Q8N543 542 aa14.53□□□□□ -0.08
DDX54-201ENST00000306014 SH3RF3Q8TEJ3 882 aaPredicted RBP14.53□□□□□ -0.08
DDX54-201ENST00000306014 LRRC1Q9BTT6 524 aa14.53□□□□□ -0.08
DDX54-201ENST00000306014 C3P01024 1663 aa14.53□□□□□ -0.08
DDX54-201ENST00000306014 SALL1Q9NSC2 1324 aa14.53□□□□□ -0.08
DDX54-201ENST00000306014 GAS7O60861 476 aa14.53□□□□□ -0.08
DDX54-201ENST00000306014 AFPP02771 609 aaKnown RBP14.53□□□□□ -0.08
DDX54-201ENST00000306014 FAM212AQ96EL1 285 aa14.53□□□□□ -0.08
DDX54-201ENST00000306014 EFCC1Q9HA90 598 aa14.53□□□□□ -0.08
DDX54-201ENST00000306014 NOVA2Q9UNW9 492 aaKnown RBP14.53□□□□□ -0.08
DDX54-201ENST00000306014 PLTPP55058 493 aa14.52□□□□□ -0.08
DDX54-201ENST00000306014 ASPRV1Q53RT3 343 aa14.52□□□□□ -0.08
DDX54-201ENST00000306014 ALKBH5Q6P6C2 394 aaKnown RBP14.52□□□□□ -0.08
DDX54-201ENST00000306014 FLAD1Q8NFF5 587 aa14.52□□□□□ -0.08
DDX54-201ENST00000306014 PPP1R14CQ8TAE6 165 aa14.52□□□□□ -0.08
DDX54-201ENST00000306014 WHAMMQ8TF30 809 aa14.52□□□□□ -0.08
DDX54-201ENST00000306014 GPR101Q96P66 508 aaPredicted RBP14.52□□□□□ -0.08
DDX54-201ENST00000306014 TRIM7Q9C029 511 aa14.52□□□□□ -0.08
DDX54-201ENST00000306014 HDAC9Q9UKV0 1011 aa14.52□□□□□ -0.08
DDX54-201ENST00000306014 PACSIN2Q9UNF0 486 aaPredicted RBP14.52□□□□□ -0.08
DDX54-201ENST00000306014 GFPT2O94808 682 aa14.52□□□□□ -0.08
DDX54-201ENST00000306014 CLTAP09496 248 aa14.52□□□□□ -0.08
DDX54-201ENST00000306014 CDK8P49336 464 aa14.52□□□□□ -0.08
DDX54-201ENST00000306014 POLD4Q9HCU8 107 aa14.52□□□□□ -0.08
DDX54-201ENST00000306014 USTQ9Y2C2 406 aa14.52□□□□□ -0.08
DDX54-201ENST00000306014 STK38LQ9Y2H1 464 aa14.52□□□□□ -0.08
DDX54-201ENST00000306014 PLA2G4BP0C869 781 aa14.52□□□□□ -0.09
DDX54-201ENST00000306014 ALDH3A1P30838 453 aa14.52□□□□□ -0.09
DDX54-201ENST00000306014 NTRK3Q16288 839 aa14.52□□□□□ -0.09
DDX54-201ENST00000306014 ZNF512BQ96KM6 892 aaPredicted RBP14.52□□□□□ -0.09
DDX54-201ENST00000306014 ZNF446Q9NWS9 450 aa14.52□□□□□ -0.09
DDX54-201ENST00000306014 ERVK-24P63145 666 aa14.52□□□□□ -0.09
DDX54-201ENST00000306014 ATP11AP98196 1134 aa14.52□□□□□ -0.09
DDX54-201ENST00000306014 PPP2R5EQ16537 467 aa14.52□□□□□ -0.09
DDX54-201ENST00000306014 BEND6Q5SZJ8 279 aaPredicted RBP14.52□□□□□ -0.09
DDX54-201ENST00000306014 KANSL2Q9H9L4 492 aa14.52□□□□□ -0.09
DDX54-201ENST00000306014 STK24Q9Y6E0 443 aa14.52□□□□□ -0.09
DDX54-201ENST00000306014 CTNND1O60716 968 aaKnown RBP14.51□□□□□ -0.09
DDX54-201ENST00000306014 LRRN2O75325 713 aa14.51□□□□□ -0.09
DDX54-201ENST00000306014 PSMD2Q13200 908 aa14.51□□□□□ -0.09
DDX54-201ENST00000306014 UAP1Q16222 522 aaPredicted RBP14.51□□□□□ -0.09
DDX54-201ENST00000306014 RBM26Q5T8P6 1007 aaKnown RBP14.51□□□□□ -0.09
DDX54-201ENST00000306014 MAGOHBQ96A72 148 aaKnown RBP14.51□□□□□ -0.09
DDX54-201ENST00000306014 TACO1Q9BSH4 297 aaKnown RBP14.51□□□□□ -0.09
DDX54-201ENST00000306014 TMEM260Q9NX78 707 aa14.51□□□□□ -0.09
DDX54-201ENST00000306014 PLAAQ9Y263 795 aa14.51□□□□□ -0.09
DDX54-201ENST00000306014 DAAM1Q9Y4D1 1078 aa14.51□□□□□ -0.09
DDX54-201ENST00000306014 MXRA7P84157 204 aa14.51□□□□□ -0.09
DDX54-201ENST00000306014 C6orf163Q5TEZ5 329 aa14.51□□□□□ -0.09
DDX54-201ENST00000306014 ICE2Q659A1 982 aa14.51□□□□□ -0.09
DDX54-201ENST00000306014 KSR1Q8IVT5 923 aa14.51□□□□□ -0.09
DDX54-201ENST00000306014 FNBP1Q96RU3 617 aa14.51□□□□□ -0.09
DDX54-201ENST00000306014 TRIM9Q9C026 710 aa14.51□□□□□ -0.09
DDX54-201ENST00000306014 HOMER3Q9NSC5 361 aa14.51□□□□□ -0.09
DDX54-201ENST00000306014 PARP2Q9UGN5 583 aa14.51□□□□□ -0.09
DDX54-201ENST00000306014 SNX12Q9UMY4 172 aa14.51□□□□□ -0.09
DDX54-201ENST00000306014 RABGAP1Q9Y3P9 1069 aa14.51□□□□□ -0.09
DDX54-201ENST00000306014 HARSP12081 509 aaKnown RBP14.51□□□□□ -0.09
DDX54-201ENST00000306014 CASP7P55210 303 aa14.51□□□□□ -0.09
DDX54-201ENST00000306014 STK4Q13043 487 aa14.51□□□□□ -0.09
DDX54-201ENST00000306014 KCNB1Q14721 858 aa14.51□□□□□ -0.09
DDX54-201ENST00000306014 FAM83BQ5T0W9 1011 aa14.51□□□□□ -0.09
DDX54-201ENST00000306014 SLFN13Q68D06 897 aa14.51□□□□□ -0.09
DDX54-201ENST00000306014 GCNT4Q9P109 453 aa14.51□□□□□ -0.09
DDX54-201ENST00000306014 PTPN22Q9Y2R2 807 aa14.51□□□□□ -0.09
DDX54-201ENST00000306014 STX2P32856 288 aa14.5□□□□□ -0.09
DDX54-201ENST00000306014 SMTNP53814 917 aa14.5□□□□□ -0.09
DDX54-201ENST00000306014 MESDQ14696 234 aa14.5□□□□□ -0.09
DDX54-201ENST00000306014 FAM84BQ96KN1 310 aaPredicted RBP14.5□□□□□ -0.09
DDX54-201ENST00000306014 MYCBPQ99417 103 aaPredicted RBP14.5□□□□□ -0.09
DDX54-201ENST00000306014 JPH2Q9BR39 696 aaPredicted RBP14.5□□□□□ -0.09
DDX54-201ENST00000306014 INTS9Q9NV88 658 aaKnown RBP14.5□□□□□ -0.09
DDX54-201ENST00000306014 BARHL2Q9NY43 387 aa14.5□□□□□ -0.09
DDX54-201ENST00000306014 SIGLEC1Q9BZZ2 1709 aa14.5□□□□□ -0.09
DDX54-201ENST00000306014 TARSL2A2RTX5 802 aaKnown RBP14.5□□□□□ -0.09
DDX54-201ENST00000306014 FERP16591 822 aa14.5□□□□□ -0.09
DDX54-201ENST00000306014 E2F5Q15329 346 aa14.5□□□□□ -0.09
DDX54-201ENST00000306014 CLUL1Q15846 466 aa14.5□□□□□ -0.09
DDX54-201ENST00000306014 WDR44Q5JSH3 913 aa14.5□□□□□ -0.09
DDX54-201ENST00000306014 ELOA2Q8IYF1 753 aaPredicted RBP14.5□□□□□ -0.09
DDX54-201ENST00000306014 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.5□□□□□ -0.09
DDX54-201ENST00000306014 SMARCAL1Q9NZC9 954 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms