RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 SPDYE3A6NKU9 549 aa30.37■■■□□ 2.45
CDKN2A-201ENST00000304494 FIBPO43427 364 aa30.37■■■□□ 2.45
CDKN2A-201ENST00000304494 CDC27P30260 824 aa30.37■■■□□ 2.45
CDKN2A-201ENST00000304494 SP2Q02086 613 aa30.37■■■□□ 2.45
CDKN2A-201ENST00000304494 WWC2Q6AWC2 1192 aa30.37■■■□□ 2.45
CDKN2A-201ENST00000304494 USP26Q9BXU7 913 aa30.37■■■□□ 2.45
CDKN2A-201ENST00000304494 AGXT2Q9BYV1 514 aa30.37■■■□□ 2.45
CDKN2A-201ENST00000304494 LAMA2P24043 3122 aaKnown RBP30.36■■■□□ 2.45
CDKN2A-201ENST00000304494 SPATA31C2B4DYI2 1134 aa30.36■■■□□ 2.45
CDKN2A-201ENST00000304494 PPFIA4O75335 1185 aa30.36■■■□□ 2.45
CDKN2A-201ENST00000304494 NAPAP54920 295 aa30.36■■■□□ 2.45
CDKN2A-201ENST00000304494 PSRC1Q6PGN9 363 aaPredicted RBP30.36■■■□□ 2.45
CDKN2A-201ENST00000304494 NLRX1Q86UT6 975 aa30.36■■■□□ 2.45
CDKN2A-201ENST00000304494 SESTD1Q86VW0 696 aa30.36■■■□□ 2.45
CDKN2A-201ENST00000304494 KAT2BQ92831 832 aa30.36■■■□□ 2.45
CDKN2A-201ENST00000304494 EHMT1Q9H9B1 1298 aa30.36■■■□□ 2.45
CDKN2A-201ENST00000304494 RTEL1Q9NZ71 1219 aa30.36■■■□□ 2.45
CDKN2A-201ENST00000304494 NID2Q14112 1375 aa30.36■■■□□ 2.45
CDKN2A-201ENST00000304494 HOXD8P13378 290 aaPredicted RBP30.35■■■□□ 2.45
CDKN2A-201ENST00000304494 NEDD9Q14511 834 aa30.35■■■□□ 2.45
CDKN2A-201ENST00000304494 UBE2SQ16763 222 aa30.35■■■□□ 2.45
CDKN2A-201ENST00000304494 HSDL1Q3SXM5 330 aa30.35■■■□□ 2.45
CDKN2A-201ENST00000304494 RUFY3Q7L099 469 aa30.35■■■□□ 2.45
CDKN2A-201ENST00000304494 DEFB123Q8N688 67 aa30.35■■■□□ 2.45
CDKN2A-201ENST00000304494 BUD13Q9BRD0 619 aaKnown RBP eCLIP30.35■■■□□ 2.45
CDKN2A-201ENST00000304494 IL23AQ9NPF7 189 aa30.35■■■□□ 2.45
CDKN2A-201ENST00000304494 NOD1Q9Y239 953 aa30.35■■■□□ 2.45
CDKN2A-201ENST00000304494 UMODL1Q5DID0 1318 aa30.34■■■□□ 2.45
CDKN2A-201ENST00000304494 F2P00734 622 aa30.34■■■□□ 2.45
CDKN2A-201ENST00000304494 CYP2C9P11712 490 aa30.34■■■□□ 2.45
CDKN2A-201ENST00000304494 ADD1P35611 737 aaKnown RBP30.34■■■□□ 2.45
CDKN2A-201ENST00000304494 CCL23P55773 120 aa30.34■■■□□ 2.45
CDKN2A-201ENST00000304494 SMAD3P84022 425 aaKnown RBP30.34■■■□□ 2.45
CDKN2A-201ENST00000304494 RIC8AQ9NPQ8 531 aa30.34■■■□□ 2.45
CDKN2A-201ENST00000304494 BARHL2Q9NY43 387 aa30.34■■■□□ 2.45
CDKN2A-201ENST00000304494 SORBS3O60504 671 aa30.33■■■□□ 2.45
CDKN2A-201ENST00000304494 TMEM240Q5SV17 173 aa30.33■■■□□ 2.45
CDKN2A-201ENST00000304494 PPP1R13LQ8WUF5 828 aa30.33■■■□□ 2.45
CDKN2A-201ENST00000304494 CDHR1Q96JP9 859 aa30.33■■■□□ 2.45
CDKN2A-201ENST00000304494 GLT8D2Q9H1C3 349 aa30.33■■■□□ 2.45
CDKN2A-201ENST00000304494 WNT8AQ9H1J5 351 aa30.33■■■□□ 2.45
CDKN2A-201ENST00000304494 ZSWIM6Q9HCJ5 1215 aa30.33■■■□□ 2.45
CDKN2A-201ENST00000304494 PCDHA6Q9UN73 950 aa30.33■■■□□ 2.45
CDKN2A-201ENST00000304494 PCDHA8Q9Y5H6 950 aa30.33■■■□□ 2.45
CDKN2A-201ENST00000304494 STXBP3O00186 592 aa30.32■■■□□ 2.44
CDKN2A-201ENST00000304494 NOP56O00567 594 aaKnown RBP30.32■■■□□ 2.44
CDKN2A-201ENST00000304494 ZNF286BP0CG31 522 aa30.32■■■□□ 2.44
CDKN2A-201ENST00000304494 PSEN2P49810 448 aa30.32■■■□□ 2.44
CDKN2A-201ENST00000304494 ADCY7P51828 1080 aa30.32■■■□□ 2.44
CDKN2A-201ENST00000304494 MFSD10Q14728 455 aa30.32■■■□□ 2.44
CDKN2A-201ENST00000304494 FAM109BQ6ICB4 259 aaPredicted RBP30.32■■■□□ 2.44
CDKN2A-201ENST00000304494 METTL7BQ6UX53 244 aa30.32■■■□□ 2.44
CDKN2A-201ENST00000304494 C16orf59Q7L2K0 433 aa30.32■■■□□ 2.44
CDKN2A-201ENST00000304494 C7orf31Q8N865 590 aa30.32■■■□□ 2.44
CDKN2A-201ENST00000304494 GIMAP8Q8ND71 665 aaPredicted RBP30.32■■■□□ 2.44
CDKN2A-201ENST00000304494 SENP7Q9BQF6 1050 aa30.32■■■□□ 2.44
CDKN2A-201ENST00000304494 TM6SF1Q9BZW5 370 aa30.32■■■□□ 2.44
CDKN2A-201ENST00000304494 CYP46A1Q9Y6A2 500 aa30.32■■■□□ 2.44
CDKN2A-201ENST00000304494 SEMA3FQ13275 785 aa30.31■■■□□ 2.44
CDKN2A-201ENST00000304494 PTGISQ16647 500 aa30.31■■■□□ 2.44
CDKN2A-201ENST00000304494 PFKFB3Q16875 520 aaPredicted RBP30.31■■■□□ 2.44
CDKN2A-201ENST00000304494 KIAA0753Q2KHM9 967 aa30.31■■■□□ 2.44
CDKN2A-201ENST00000304494 RPUSD2Q8IZ73 545 aaKnown RBP30.31■■■□□ 2.44
CDKN2A-201ENST00000304494 GPRASP2Q96D09 838 aa30.31■■■□□ 2.44
CDKN2A-201ENST00000304494 HAS3O00219 553 aa30.3■■■□□ 2.44
CDKN2A-201ENST00000304494 PITPNM1O00562 1244 aa30.3■■■□□ 2.44
CDKN2A-201ENST00000304494 FOSP01100 380 aaPredicted RBP30.3■■■□□ 2.44
CDKN2A-201ENST00000304494 ACRP10323 421 aa30.3■■■□□ 2.44
CDKN2A-201ENST00000304494 EVCP57679 992 aa30.3■■■□□ 2.44
CDKN2A-201ENST00000304494 BFSP2Q13515 415 aa30.3■■■□□ 2.44
CDKN2A-201ENST00000304494 TYW1BQ6NUM6 668 aa30.3■■■□□ 2.44
CDKN2A-201ENST00000304494 ZNF365Q70YC5 407 aa30.3■■■□□ 2.44
CDKN2A-201ENST00000304494 Q7L0L9 218 aa30.3■■■□□ 2.44
CDKN2A-201ENST00000304494 CCDC155Q8N6L0 562 aa30.3■■■□□ 2.44
CDKN2A-201ENST00000304494 ALG1Q9BT22 464 aa30.3■■■□□ 2.44
CDKN2A-201ENST00000304494 MTIF3Q9H2K0 278 aaKnown RBP30.3■■■□□ 2.44
CDKN2A-201ENST00000304494 GTF2IRD1Q9UHL9 959 aa30.3■■■□□ 2.44
CDKN2A-201ENST00000304494 MYH7BA7E2Y1 1941 aa30.3■■■□□ 2.44
CDKN2A-201ENST00000304494 SMCO2A6NFE2 343 aa30.29■■■□□ 2.44
CDKN2A-201ENST00000304494 GDF6Q6KF10 455 aaPredicted RBP30.29■■■□□ 2.44
CDKN2A-201ENST00000304494 CYFIP1Q7L576 1253 aa30.29■■■□□ 2.44
CDKN2A-201ENST00000304494 RETREG2Q8NC44 543 aa30.29■■■□□ 2.44
CDKN2A-201ENST00000304494 HSFX4A0A1B0GTS1 333 aaPredicted RBP30.28■■■□□ 2.44
CDKN2A-201ENST00000304494 HSFX3A0A1B0GWH4 333 aaPredicted RBP30.28■■■□□ 2.44
CDKN2A-201ENST00000304494 FGBP02675 491 aa30.28■■■□□ 2.44
CDKN2A-201ENST00000304494 PFKMP08237 780 aa30.28■■■□□ 2.44
CDKN2A-201ENST00000304494 SCG2P13521 617 aa30.28■■■□□ 2.44
CDKN2A-201ENST00000304494 AKAP17AQ02040 695 aaKnown RBP30.28■■■□□ 2.44
CDKN2A-201ENST00000304494 SCLYQ96I15 445 aa30.28■■■□□ 2.44
CDKN2A-201ENST00000304494 HDAC6Q9UBN7 1215 aa30.28■■■□□ 2.44
CDKN2A-201ENST00000304494 ITGB5P18084 799 aa30.27■■■□□ 2.44
CDKN2A-201ENST00000304494 PDIA3P30101 505 aaKnown RBP30.27■■■□□ 2.44
CDKN2A-201ENST00000304494 RFC2P35250 354 aa30.27■■■□□ 2.44
CDKN2A-201ENST00000304494 AP3B2Q13367 1082 aa30.27■■■□□ 2.44
CDKN2A-201ENST00000304494 MTMR1Q13613 665 aa30.27■■■□□ 2.44
CDKN2A-201ENST00000304494 ZNF697Q5TEC3 545 aa30.27■■■□□ 2.44
CDKN2A-201ENST00000304494 RASIP1Q5U651 963 aa30.27■■■□□ 2.44
CDKN2A-201ENST00000304494 CAGE1Q8TC20 777 aa30.27■■■□□ 2.44
CDKN2A-201ENST00000304494 CCDC12Q8WUD4 166 aaPredicted RBP30.27■■■□□ 2.44
CDKN2A-201ENST00000304494 HERVK_113Q902F9 699 aa30.27■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms