RNA–Protein interactions for RNA: ENST00000303795.8

APLF-201, Transcript of aprataxin and PNKP like factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APLF, Length 3,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-201ENST00000303795 CKAP4Q07065 602 aaKnown RBP13.09□□□□□ -0.31
APLF-201ENST00000303795 C2orf54Q08AI8 447 aa13.09□□□□□ -0.31
APLF-201ENST00000303795 CCDC155Q8N6L0 562 aa13.09□□□□□ -0.31
APLF-201ENST00000303795 PANX2Q96RD6 677 aa13.09□□□□□ -0.31
APLF-201ENST00000303795 IFIH1Q9BYX4 1025 aaKnown RBP13.09□□□□□ -0.31
APLF-201ENST00000303795 LUC7LQ9NQ29 371 aaKnown RBP13.09□□□□□ -0.31
APLF-201ENST00000303795 FBXO2Q9UK22 296 aaPredicted RBP13.09□□□□□ -0.31
APLF-201ENST00000303795 MYH7P12883 1935 aa13.08□□□□□ -0.32
APLF-201ENST00000303795 A0A1B0GTH6 734 aa13.08□□□□□ -0.32
APLF-201ENST00000303795 RNF225M0QZC1 329 aaPredicted RBP13.08□□□□□ -0.32
APLF-201ENST00000303795 EIF3HO15372 352 aaKnown RBP eCLIP13.08□□□□□ -0.32
APLF-201ENST00000303795 FAM13AO94988 1023 aa13.08□□□□□ -0.32
APLF-201ENST00000303795 KRT13P13646 458 aa13.08□□□□□ -0.32
APLF-201ENST00000303795 TRAPPC11Q7Z392 1133 aa13.08□□□□□ -0.32
APLF-201ENST00000303795 YTHDF3Q7Z739 585 aaKnown RBP13.08□□□□□ -0.32
APLF-201ENST00000303795 ZNF34Q8IZ26 560 aa13.08□□□□□ -0.32
APLF-201ENST00000303795 TAB3Q8N5C8 712 aaPredicted RBP13.08□□□□□ -0.32
APLF-201ENST00000303795 NSUN4Q96CB9 384 aaKnown RBP13.08□□□□□ -0.32
APLF-201ENST00000303795 PPP1R12BO60237 982 aaPredicted RBP13.08□□□□□ -0.32
APLF-201ENST00000303795 TUBBP07437 444 aa13.08□□□□□ -0.32
APLF-201ENST00000303795 TTLL12Q14166 644 aaPredicted RBP13.08□□□□□ -0.32
APLF-201ENST00000303795 SPRED3Q2MJR0 410 aa13.08□□□□□ -0.32
APLF-201ENST00000303795 INTS5Q6P9B9 1019 aaKnown RBP13.08□□□□□ -0.32
APLF-201ENST00000303795 PIGOQ8TEQ8 1089 aa13.08□□□□□ -0.32
APLF-201ENST00000303795 COG1Q8WTW3 980 aa13.08□□□□□ -0.32
APLF-201ENST00000303795 HYOU1Q9Y4L1 999 aa13.08□□□□□ -0.32
APLF-201ENST00000303795 CD44P16070 742 aaKnown RBP13.08□□□□□ -0.32
APLF-201ENST00000303795 SF3B2Q13435 895 aaKnown RBP13.08□□□□□ -0.32
APLF-201ENST00000303795 SH2D3CQ8N5H7 860 aa13.08□□□□□ -0.32
APLF-201ENST00000303795 MICAL1Q8TDZ2 1067 aa13.08□□□□□ -0.32
APLF-201ENST00000303795 AENQ8WTP8 325 aaKnown RBP13.08□□□□□ -0.32
APLF-201ENST00000303795 BICD1Q96G01 975 aa13.08□□□□□ -0.32
APLF-201ENST00000303795 PACSIN2Q9UNF0 486 aaPredicted RBP13.08□□□□□ -0.32
APLF-201ENST00000303795 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.08□□□□□ -0.32
APLF-201ENST00000303795 BACH1O14867 736 aa13.07□□□□□ -0.32
APLF-201ENST00000303795 FTCDO95954 541 aa13.07□□□□□ -0.32
APLF-201ENST00000303795 TRIM28Q13263 835 aaKnown RBP13.07□□□□□ -0.32
APLF-201ENST00000303795 MYCT1Q8N699 235 aa13.07□□□□□ -0.32
APLF-201ENST00000303795 QTRT2Q9H974 415 aaKnown RBP13.07□□□□□ -0.32
APLF-201ENST00000303795 ATP8A2Q9NTI2 1148 aa13.07□□□□□ -0.32
APLF-201ENST00000303795 NPHP3-ACAD11A0A0J9YXS1 232 aa13.07□□□□□ -0.32
APLF-201ENST00000303795 SKAP2O75563 359 aaPredicted RBP13.07□□□□□ -0.32
APLF-201ENST00000303795 USP14P54578 494 aa13.07□□□□□ -0.32
APLF-201ENST00000303795 FAM114A1Q8IWE2 563 aa13.07□□□□□ -0.32
APLF-201ENST00000303795 GINS2Q9Y248 185 aa13.07□□□□□ -0.32
APLF-201ENST00000303795 AFDNP55196 1824 aaKnown RBP13.07□□□□□ -0.32
APLF-201ENST00000303795 CCDC169A6NNP5 214 aa13.07□□□□□ -0.32
APLF-201ENST00000303795 USP17L10C9JJH3 530 aa13.07□□□□□ -0.32
APLF-201ENST00000303795 GTPBP6O43824 516 aaPredicted RBP13.07□□□□□ -0.32
APLF-201ENST00000303795 CEP104O60308 925 aa13.07□□□□□ -0.32
APLF-201ENST00000303795 SEPT12Q8IYM1 358 aa13.07□□□□□ -0.32
APLF-201ENST00000303795 TCHPQ9BT92 498 aa13.07□□□□□ -0.32
APLF-201ENST00000303795 LSM14BQ9BX40 385 aaKnown RBP13.07□□□□□ -0.32
APLF-201ENST00000303795 TDRD3Q9H7E2 651 aaKnown RBP13.07□□□□□ -0.32
APLF-201ENST00000303795 E9PMD0 336 aa13.06□□□□□ -0.32
APLF-201ENST00000303795 PPIP5K2O43314 1243 aa13.06□□□□□ -0.32
APLF-201ENST00000303795 ELF1P32519 619 aa13.06□□□□□ -0.32
APLF-201ENST00000303795 GPSM2P81274 684 aa13.06□□□□□ -0.32
APLF-201ENST00000303795 EHHADHQ08426 723 aa13.06□□□□□ -0.32
APLF-201ENST00000303795 PPFIA1Q13136 1202 aa13.06□□□□□ -0.32
APLF-201ENST00000303795 SELENOOQ9BVL4 669 aa13.06□□□□□ -0.32
APLF-201ENST00000303795 CD209Q9NNX6 404 aa13.06□□□□□ -0.32
APLF-201ENST00000303795 FAM217BQ9NTX9 383 aaPredicted RBP13.06□□□□□ -0.32
APLF-201ENST00000303795 PCDHA4Q9UN74 947 aa13.06□□□□□ -0.32
APLF-201ENST00000303795 TTC26A0AVF1 554 aa13.06□□□□□ -0.32
APLF-201ENST00000303795 PRPF3O43395 683 aaKnown RBP13.06□□□□□ -0.32
APLF-201ENST00000303795 EPB41P11171 864 aaKnown RBP13.06□□□□□ -0.32
APLF-201ENST00000303795 NEFHP12036 1026 aa13.06□□□□□ -0.32
APLF-201ENST00000303795 VPS41P49754 854 aa13.06□□□□□ -0.32
APLF-201ENST00000303795 ERVK-24P63145 666 aa13.06□□□□□ -0.32
APLF-201ENST00000303795 KRT83P78385 493 aa13.06□□□□□ -0.32
APLF-201ENST00000303795 TMTC1Q8IUR5 882 aa13.06□□□□□ -0.32
APLF-201ENST00000303795 LARGE2Q8N3Y3 721 aa13.06□□□□□ -0.32
APLF-201ENST00000303795 CCDC127Q96BQ5 260 aa13.06□□□□□ -0.32
APLF-201ENST00000303795 DDX25Q9UHL0 483 aaKnown RBP13.06□□□□□ -0.32
APLF-201ENST00000303795 ARFGEF2Q9Y6D5 1785 aa13.06□□□□□ -0.32
APLF-201ENST00000303795 ESYT3A0FGR9 886 aa13.06□□□□□ -0.32
APLF-201ENST00000303795 NCK2O43639 380 aa13.06□□□□□ -0.32
APLF-201ENST00000303795 LRRN2O75325 713 aa13.06□□□□□ -0.32
APLF-201ENST00000303795 MOCS3O95396 460 aa13.06□□□□□ -0.32
APLF-201ENST00000303795 NTSR2O95665 410 aa13.06□□□□□ -0.32
APLF-201ENST00000303795 AKR1B1P15121 316 aa13.06□□□□□ -0.32
APLF-201ENST00000303795 TTMPQ5BVD1 217 aa13.06□□□□□ -0.32
APLF-201ENST00000303795 CPLX4Q7Z7G2 160 aa13.06□□□□□ -0.32
APLF-201ENST00000303795 ENOX1Q8TC92 643 aaKnown RBP13.06□□□□□ -0.32
APLF-201ENST00000303795 GOLPH3Q9H4A6 298 aa13.06□□□□□ -0.32
APLF-201ENST00000303795 AGPAT5Q9NUQ2 364 aa13.06□□□□□ -0.32
APLF-201ENST00000303795 GSTTP1A0A1W2PQM5 241 aa13.05□□□□□ -0.32
APLF-201ENST00000303795 ZNF185O15231 689 aa13.05□□□□□ -0.32
APLF-201ENST00000303795 MMP10P09238 476 aa13.05□□□□□ -0.32
APLF-201ENST00000303795 TUBB2AQ13885 445 aa13.05□□□□□ -0.32
APLF-201ENST00000303795 CERKLQ49MI3 558 aaPredicted RBP13.05□□□□□ -0.32
APLF-201ENST00000303795 SLFN13Q68D06 897 aa13.05□□□□□ -0.32
APLF-201ENST00000303795 CDCA2Q69YH5 1023 aaPredicted RBP13.05□□□□□ -0.32
APLF-201ENST00000303795 ZNF572Q7Z3I7 529 aaPredicted RBP13.05□□□□□ -0.32
APLF-201ENST00000303795 TUBB2BQ9BVA1 445 aa13.05□□□□□ -0.32
APLF-201ENST00000303795 PCIF1Q9H4Z3 704 aa13.05□□□□□ -0.32
APLF-201ENST00000303795 A0A087X0B3 334 aa13.05□□□□□ -0.32
APLF-201ENST00000303795 BICDL2A1A5D9 508 aa13.05□□□□□ -0.32
APLF-201ENST00000303795 FGFR1OPO95684 399 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms