RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 MSTO1Q9BUK6 570 aa8.5□□□□□ -1.05
SCN9A-201ENST00000303354 LARSQ9P2J5 1176 aaKnown RBP8.5□□□□□ -1.05
SCN9A-201ENST00000303354 CNOT7Q9UIV1 285 aaKnown RBP8.5□□□□□ -1.05
SCN9A-201ENST00000303354 SEMA3EO15041 775 aa8.5□□□□□ -1.05
SCN9A-201ENST00000303354 ELMOD1Q8N336 334 aa8.5□□□□□ -1.05
SCN9A-201ENST00000303354 PRR23AA6NEV1 266 aa8.49□□□□□ -1.05
SCN9A-201ENST00000303354 DYNC1LI2O43237 492 aaPredicted RBP8.49□□□□□ -1.05
SCN9A-201ENST00000303354 CREB3O43889 395 aa8.49□□□□□ -1.05
SCN9A-201ENST00000303354 ANGPTL8Q6UXH0 198 aa8.49□□□□□ -1.05
SCN9A-201ENST00000303354 STMN2Q93045 179 aa8.49□□□□□ -1.05
SCN9A-201ENST00000303354 NACC1Q96RE7 527 aa8.49□□□□□ -1.05
SCN9A-201ENST00000303354 SWAP70Q9UH65 585 aa8.49□□□□□ -1.05
SCN9A-201ENST00000303354 ACTN4O43707 911 aaKnown RBP8.49□□□□□ -1.05
SCN9A-201ENST00000303354 CLEC10AQ8IUN9 316 aa8.49□□□□□ -1.05
SCN9A-201ENST00000303354 SIX6OS1Q8N1H7 587 aa8.49□□□□□ -1.05
SCN9A-201ENST00000303354 CNOT6LQ96LI5 555 aaKnown RBP8.49□□□□□ -1.05
SCN9A-201ENST00000303354 RPAP3Q9H6T3 665 aaPredicted RBP8.49□□□□□ -1.05
SCN9A-201ENST00000303354 FANCLQ9NW38 375 aa8.49□□□□□ -1.05
SCN9A-201ENST00000303354 FZD1Q9UP38 647 aa8.49□□□□□ -1.05
SCN9A-201ENST00000303354 PSAPP07602 524 aa8.49□□□□□ -1.05
SCN9A-201ENST00000303354 PAN2Q504Q3 1202 aaKnown RBP8.49□□□□□ -1.05
SCN9A-201ENST00000303354 FAM26FQ5R3K3 315 aa8.49□□□□□ -1.05
SCN9A-201ENST00000303354 KCTD6Q8NC69 237 aa8.49□□□□□ -1.05
SCN9A-201ENST00000303354 PPP1R12CQ9BZL4 782 aa8.49□□□□□ -1.05
SCN9A-201ENST00000303354 UGGT2Q9NYU1 1516 aa8.49□□□□□ -1.05
SCN9A-201ENST00000303354 ADORA2BP29275 332 aa8.49□□□□□ -1.05
SCN9A-201ENST00000303354 FAM133AQ8N9E0 248 aa8.49□□□□□ -1.05
SCN9A-201ENST00000303354 OR6J1Q8NGC5 347 aa8.49□□□□□ -1.05
SCN9A-201ENST00000303354 DYDC2Q96IM9 177 aa8.49□□□□□ -1.05
SCN9A-201ENST00000303354 TTC14Q96N46 770 aa8.49□□□□□ -1.05
SCN9A-201ENST00000303354 MINPP1Q9UNW1 487 aa8.49□□□□□ -1.05
SCN9A-201ENST00000303354 COL4A3BPQ9Y5P4 624 aa8.49□□□□□ -1.05
SCN9A-201ENST00000303354 RASGRF1Q13972 1273 aa8.49□□□□□ -1.05
SCN9A-201ENST00000303354 TAF1CQ15572 869 aaPredicted RBP8.49□□□□□ -1.05
SCN9A-201ENST00000303354 YAF2Q8IY57 180 aa8.49□□□□□ -1.05
SCN9A-201ENST00000303354 BABAM1Q9NWV8 329 aa8.49□□□□□ -1.05
SCN9A-201ENST00000303354 ROBO2Q9HCK4 1378 aa8.49□□□□□ -1.05
SCN9A-201ENST00000303354 NR2F2P24468 414 aa8.49□□□□□ -1.05
SCN9A-201ENST00000303354 NEDD9Q14511 834 aa8.49□□□□□ -1.05
SCN9A-201ENST00000303354 RNF219Q5W0B1 726 aaPredicted RBP8.49□□□□□ -1.05
SCN9A-201ENST00000303354 TSC1Q92574 1164 aa8.49□□□□□ -1.05
SCN9A-201ENST00000303354 SPATA33Q96N06 139 aa8.49□□□□□ -1.05
SCN9A-201ENST00000303354 ABCC4O15439 1325 aa8.49□□□□□ -1.05
SCN9A-201ENST00000303354 NOL3O60936 208 aaKnown RBP8.49□□□□□ -1.05
SCN9A-201ENST00000303354 RPS6KA4O75676 772 aa8.49□□□□□ -1.05
SCN9A-201ENST00000303354 BAG2O95816 211 aa8.49□□□□□ -1.05
SCN9A-201ENST00000303354 SCARF1Q14162 830 aa8.49□□□□□ -1.05
SCN9A-201ENST00000303354 JADE1Q6IE81 842 aa8.49□□□□□ -1.05
SCN9A-201ENST00000303354 RMDN3Q96TC7 470 aa8.49□□□□□ -1.05
SCN9A-201ENST00000303354 HEXIM1O94992 359 aaKnown RBP8.48□□□□□ -1.05
SCN9A-201ENST00000303354 PTK2Q05397 1052 aa8.48□□□□□ -1.05
SCN9A-201ENST00000303354 LMBRD2Q68DH5 695 aaPredicted RBP8.48□□□□□ -1.05
SCN9A-201ENST00000303354 FASTKD5Q7L8L6 764 aaKnown RBP8.48□□□□□ -1.05
SCN9A-201ENST00000303354 FAM76AQ8TAV0 307 aa8.48□□□□□ -1.05
SCN9A-201ENST00000303354 THOC1Q96FV9 657 aaKnown RBP8.48□□□□□ -1.05
SCN9A-201ENST00000303354 ACCSQ96QU6 501 aa8.48□□□□□ -1.05
SCN9A-201ENST00000303354 HAUS2Q9NVX0 235 aa8.48□□□□□ -1.05
SCN9A-201ENST00000303354 TBK1Q9UHD2 729 aa8.48□□□□□ -1.05
SCN9A-201ENST00000303354 ARHGAP4P98171 946 aa8.48□□□□□ -1.05
SCN9A-201ENST00000303354 MTMR1Q13613 665 aa8.48□□□□□ -1.05
SCN9A-201ENST00000303354 MTMR2Q13614 643 aa8.48□□□□□ -1.05
SCN9A-201ENST00000303354 EXOC3L4Q17RC7 722 aa8.48□□□□□ -1.05
SCN9A-201ENST00000303354 DARS2Q6PI48 645 aaKnown RBP8.48□□□□□ -1.05
SCN9A-201ENST00000303354 RPGRIP1Q96KN7 1286 aa8.48□□□□□ -1.05
SCN9A-201ENST00000303354 NUP58Q9BVL2 599 aa8.48□□□□□ -1.05
SCN9A-201ENST00000303354 CD209Q9NNX6 404 aa8.48□□□□□ -1.05
SCN9A-201ENST00000303354 SLC12A6Q9UHW9 1150 aa8.48□□□□□ -1.05
SCN9A-201ENST00000303354 ARHGAP42A6NI28 874 aa8.48□□□□□ -1.05
SCN9A-201ENST00000303354 S100BP04271 92 aaPredicted RBP8.48□□□□□ -1.05
SCN9A-201ENST00000303354 ATP1A2P50993 1020 aa8.48□□□□□ -1.05
SCN9A-201ENST00000303354 SMC5Q8IY18 1101 aa8.48□□□□□ -1.05
SCN9A-201ENST00000303354 PPP1R13LQ8WUF5 828 aa8.48□□□□□ -1.05
SCN9A-201ENST00000303354 TACO1Q9BSH4 297 aaKnown RBP8.48□□□□□ -1.05
SCN9A-201ENST00000303354 KANSL2Q9H9L4 492 aa8.48□□□□□ -1.05
SCN9A-201ENST00000303354 MAP10Q9P2G4 905 aa8.48□□□□□ -1.05
SCN9A-201ENST00000303354 ZFYVE16Q7Z3T8 1539 aa8.48□□□□□ -1.05
SCN9A-201ENST00000303354 KDM2BQ8NHM5 1336 aa8.48□□□□□ -1.05
SCN9A-201ENST00000303354 NVLO15381 856 aaKnown RBP8.48□□□□□ -1.05
SCN9A-201ENST00000303354 MFSD14CQ5VZR4 134 aa8.48□□□□□ -1.05
SCN9A-201ENST00000303354 RINT1Q6NUQ1 792 aa8.48□□□□□ -1.05
SCN9A-201ENST00000303354 MLKLQ8NB16 471 aa8.48□□□□□ -1.05
SCN9A-201ENST00000303354 LLPHQ9BRT6 129 aaKnown RBP8.48□□□□□ -1.05
SCN9A-201ENST00000303354 PLCB1Q9NQ66 1216 aa8.48□□□□□ -1.05
SCN9A-201ENST00000303354 NSFP46459 744 aaKnown RBP8.48□□□□□ -1.05
SCN9A-201ENST00000303354 BASP1P80723 227 aaKnown RBP8.48□□□□□ -1.05
SCN9A-201ENST00000303354 STXBP2Q15833 593 aa8.48□□□□□ -1.05
SCN9A-201ENST00000303354 C10orf67Q8IYJ2 551 aa8.48□□□□□ -1.05
SCN9A-201ENST00000303354 ATP6V0A1Q93050 837 aa8.48□□□□□ -1.05
SCN9A-201ENST00000303354 SNX21Q969T3 373 aa8.48□□□□□ -1.05
SCN9A-201ENST00000303354 HPS4Q9NQG7 708 aa8.48□□□□□ -1.05
SCN9A-201ENST00000303354 SLC16A4O15374 487 aa8.48□□□□□ -1.05
SCN9A-201ENST00000303354 MAPK4P31152 587 aa8.48□□□□□ -1.05
SCN9A-201ENST00000303354 IQCB1Q15051 598 aa8.48□□□□□ -1.05
SCN9A-201ENST00000303354 ANGEL2Q5VTE6 544 aaKnown RBP8.48□□□□□ -1.05
SCN9A-201ENST00000303354 CERS3Q8IU89 383 aa8.48□□□□□ -1.05
SCN9A-201ENST00000303354 FAM213AQ9BRX8 229 aa8.48□□□□□ -1.05
SCN9A-201ENST00000303354 UBE2Q2LH0YL09 131 aa8.48□□□□□ -1.05
SCN9A-201ENST00000303354 K7ERI5 159 aa8.48□□□□□ -1.05
SCN9A-201ENST00000303354 SARNPP82979 210 aaKnown RBP8.48□□□□□ -1.05
SCN9A-201ENST00000303354 ELF2Q15723 593 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms