RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 PALM3A6NDB9 673 aaPredicted RBP8.26□□□□□ -1.09
SF3B3-201ENST00000302516 OATP04181 439 aa8.26□□□□□ -1.09
SF3B3-201ENST00000302516 ATP2B4P23634 1241 aa8.26□□□□□ -1.09
SF3B3-201ENST00000302516 PDE1BQ01064 536 aa8.26□□□□□ -1.09
SF3B3-201ENST00000302516 TMED2Q15363 201 aa8.26□□□□□ -1.09
SF3B3-201ENST00000302516 KRT80Q6KB66 452 aa8.26□□□□□ -1.09
SF3B3-201ENST00000302516 PCDHA13Q9Y5I0 950 aa8.26□□□□□ -1.09
SF3B3-201ENST00000302516 FRMPD1Q5SYB0 1578 aa8.26□□□□□ -1.09
SF3B3-201ENST00000302516 CAPN9O14815 690 aa8.26□□□□□ -1.09
SF3B3-201ENST00000302516 RFX1P22670 979 aa8.26□□□□□ -1.09
SF3B3-201ENST00000302516 PTPREP23469 700 aa8.26□□□□□ -1.09
SF3B3-201ENST00000302516 RCN2Q14257 317 aa8.26□□□□□ -1.09
SF3B3-201ENST00000302516 TRMT2AQ8IZ69 625 aaKnown RBP8.26□□□□□ -1.09
SF3B3-201ENST00000302516 TGFBRAP1Q8WUH2 860 aa8.26□□□□□ -1.09
SF3B3-201ENST00000302516 PSPC1Q8WXF1 523 aaKnown RBP8.26□□□□□ -1.09
SF3B3-201ENST00000302516 SEPT10Q9P0V9 454 aa8.26□□□□□ -1.09
SF3B3-201ENST00000302516 PTPN22Q9Y2R2 807 aa8.26□□□□□ -1.09
SF3B3-201ENST00000302516 A2ML1A8K2U0 1454 aa8.26□□□□□ -1.09
SF3B3-201ENST00000302516 RCAN1P53805 252 aa8.26□□□□□ -1.09
SF3B3-201ENST00000302516 CENPUQ71F23 418 aa8.26□□□□□ -1.09
SF3B3-201ENST00000302516 ZBTB38Q8NAP3 1195 aaPredicted RBP8.26□□□□□ -1.09
SF3B3-201ENST00000302516 DHX38Q92620 1227 aaKnown RBP8.26□□□□□ -1.09
SF3B3-201ENST00000302516 COPRSQ9NQ92 184 aa8.26□□□□□ -1.09
SF3B3-201ENST00000302516 ATG3Q9NT62 314 aa8.26□□□□□ -1.09
SF3B3-201ENST00000302516 RCOR1Q9UKL0 485 aa8.26□□□□□ -1.09
SF3B3-201ENST00000302516 SETBP1Q9Y6X0 1596 aa8.26□□□□□ -1.09
SF3B3-201ENST00000302516 BCORL1Q5H9F3 1711 aa8.26□□□□□ -1.09
SF3B3-201ENST00000302516 CHUKO15111 745 aa8.26□□□□□ -1.09
SF3B3-201ENST00000302516 GPC4O75487 556 aa8.26□□□□□ -1.09
SF3B3-201ENST00000302516 DPCR1Q3MIW9 517 aa8.26□□□□□ -1.09
SF3B3-201ENST00000302516 PPM1KQ8N3J5 372 aa8.26□□□□□ -1.09
SF3B3-201ENST00000302516 TTC1Q99614 292 aa8.26□□□□□ -1.09
SF3B3-201ENST00000302516 WDR17Q8IZU2 1322 aa8.26□□□□□ -1.09
SF3B3-201ENST00000302516 PPP1R12AO14974 1030 aaPredicted RBP8.26□□□□□ -1.09
SF3B3-201ENST00000302516 MFAP3LO75121 409 aa8.26□□□□□ -1.09
SF3B3-201ENST00000302516 EEF1DP29692 281 aaKnown RBP8.26□□□□□ -1.09
SF3B3-201ENST00000302516 ALDH1B1P30837 517 aa8.26□□□□□ -1.09
SF3B3-201ENST00000302516 C2orf54Q08AI8 447 aa8.26□□□□□ -1.09
SF3B3-201ENST00000302516 FSCBQ5H9T9 825 aa8.26□□□□□ -1.09
SF3B3-201ENST00000302516 RESP18Q5W5W9 173 aa8.26□□□□□ -1.09
SF3B3-201ENST00000302516 ZNF449Q6P9G9 518 aa8.26□□□□□ -1.09
SF3B3-201ENST00000302516 BZW1Q7L1Q6 419 aaKnown RBP8.26□□□□□ -1.09
SF3B3-201ENST00000302516 CATSPER1Q8NEC5 780 aa8.26□□□□□ -1.09
SF3B3-201ENST00000302516 ATP6V0A1Q93050 837 aa8.26□□□□□ -1.09
SF3B3-201ENST00000302516 MAN1B1Q9UKM7 699 aa8.26□□□□□ -1.09
SF3B3-201ENST00000302516 MAD1L1Q9Y6D9 718 aa8.26□□□□□ -1.09
SF3B3-201ENST00000302516 UGGT1Q9NYU2 1555 aa8.26□□□□□ -1.09
SF3B3-201ENST00000302516 MIF4GDA9UHW6 222 aaKnown RBP8.26□□□□□ -1.09
SF3B3-201ENST00000302516 DDX39AO00148 427 aaKnown RBP8.26□□□□□ -1.09
SF3B3-201ENST00000302516 TMEM191BP0C7N4 346 aa8.26□□□□□ -1.09
SF3B3-201ENST00000302516 MCF2P10911 925 aa8.26□□□□□ -1.09
SF3B3-201ENST00000302516 SPARCL1Q14515 664 aa8.26□□□□□ -1.09
SF3B3-201ENST00000302516 ACCSQ96QU6 501 aa8.26□□□□□ -1.09
SF3B3-201ENST00000302516 TTLL3Q9Y4R7 772 aa8.26□□□□□ -1.09
SF3B3-201ENST00000302516 GSTA4O15217 222 aa8.26□□□□□ -1.09
SF3B3-201ENST00000302516 XPOTO43592 962 aaKnown RBP8.26□□□□□ -1.09
SF3B3-201ENST00000302516 SEC31AO94979 1220 aaKnown RBP8.26□□□□□ -1.09
SF3B3-201ENST00000302516 KRT10P13645 584 aa8.26□□□□□ -1.09
SF3B3-201ENST00000302516 FBXO38Q6PIJ6 1188 aa8.26□□□□□ -1.09
SF3B3-201ENST00000302516 ZNF579Q8NAF0 562 aaKnown RBP8.26□□□□□ -1.09
SF3B3-201ENST00000302516 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.26□□□□□ -1.09
SF3B3-201ENST00000302516 ZBTB9Q96C00 473 aa8.26□□□□□ -1.09
SF3B3-201ENST00000302516 SLC39A2Q9NP94 309 aa8.26□□□□□ -1.09
SF3B3-201ENST00000302516 PRDM1O75626 825 aa8.26□□□□□ -1.09
SF3B3-201ENST00000302516 CFBP00751 764 aa8.26□□□□□ -1.09
SF3B3-201ENST00000302516 ART3Q13508 389 aa8.26□□□□□ -1.09
SF3B3-201ENST00000302516 ARMCX5Q6P1M9 558 aa8.26□□□□□ -1.09
SF3B3-201ENST00000302516 C11orf57Q6ZUT1 292 aaPredicted RBP8.26□□□□□ -1.09
SF3B3-201ENST00000302516 ZNF653Q96CK0 615 aa8.26□□□□□ -1.09
SF3B3-201ENST00000302516 ACSBG1Q96GR2 724 aa8.26□□□□□ -1.09
SF3B3-201ENST00000302516 USP44Q9H0E7 712 aa8.26□□□□□ -1.09
SF3B3-201ENST00000302516 MRPL46Q9H2W6 279 aaKnown RBP8.26□□□□□ -1.09
SF3B3-201ENST00000302516 YY1AP1Q9H869 796 aa8.26□□□□□ -1.09
SF3B3-201ENST00000302516 TYW5A2RUC4 315 aaKnown RBP8.25□□□□□ -1.09
SF3B3-201ENST00000302516 TCP11X2Q5H9J9 407 aa8.25□□□□□ -1.09
SF3B3-201ENST00000302516 CACTINQ8WUQ7 758 aaKnown RBP8.25□□□□□ -1.09
SF3B3-201ENST00000302516 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.25□□□□□ -1.09
SF3B3-201ENST00000302516 ZNF594Q96JF6 807 aaPredicted RBP8.25□□□□□ -1.09
SF3B3-201ENST00000302516 MED10Q9BTT4 135 aa8.25□□□□□ -1.09
SF3B3-201ENST00000302516 ST7Q9NRC1 585 aa8.25□□□□□ -1.09
SF3B3-201ENST00000302516 STK36Q9NRP7 1315 aa8.25□□□□□ -1.09
SF3B3-201ENST00000302516 MAN1A2O60476 641 aa8.25□□□□□ -1.09
SF3B3-201ENST00000302516 MT-ND3P03897 115 aa8.25□□□□□ -1.09
SF3B3-201ENST00000302516 SURF1Q15526 300 aa8.25□□□□□ -1.09
SF3B3-201ENST00000302516 BBS5Q8N3I7 341 aa8.25□□□□□ -1.09
SF3B3-201ENST00000302516 ANKRD36BP1Q96IX9 119 aa8.25□□□□□ -1.09
SF3B3-201ENST00000302516 NOD1Q9Y239 953 aa8.25□□□□□ -1.09
SF3B3-201ENST00000302516 CRLF3Q8IUI8 442 aa8.25□□□□□ -1.09
SF3B3-201ENST00000302516 GIPC2Q8TF65 315 aa8.25□□□□□ -1.09
SF3B3-201ENST00000302516 ANGPTL3Q9Y5C1 460 aa8.25□□□□□ -1.09
SF3B3-201ENST00000302516 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.25□□□□□ -1.095e-7■■■□□ 16.4
SF3B3-201ENST00000302516 ARHGEF37A1IGU5 675 aa8.25□□□□□ -1.09
SF3B3-201ENST00000302516 KLRF2D3W0D1 207 aa8.25□□□□□ -1.09
SF3B3-201ENST00000302516 RFX6Q8HWS3 928 aa8.25□□□□□ -1.09
SF3B3-201ENST00000302516 POMGNT1Q8WZA1 660 aa8.25□□□□□ -1.09
SF3B3-201ENST00000302516 STOML1Q9UBI4 398 aa8.25□□□□□ -1.09
SF3B3-201ENST00000302516 PCDHB4Q9Y5E5 795 aa8.25□□□□□ -1.09
SF3B3-201ENST00000302516 MAGI2Q86UL8 1455 aa8.25□□□□□ -1.09
SF3B3-201ENST00000302516 TMOD1P28289 359 aa8.25□□□□□ -1.09
SF3B3-201ENST00000302516 DIXDC1Q155Q3 683 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms