RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 MUC3AQ02505 3323 aa12.98□□□□□ -0.33
CLCC1-201ENST00000302500 GH1P01241 217 aa12.98□□□□□ -0.33
CLCC1-201ENST00000302500 ITGB5P18084 799 aa12.98□□□□□ -0.33
CLCC1-201ENST00000302500 CASTP20810 708 aaKnown RBP12.98□□□□□ -0.33
CLCC1-201ENST00000302500 RBL2Q08999 1139 aa12.98□□□□□ -0.33
CLCC1-201ENST00000302500 GPNMBQ14956 572 aa12.98□□□□□ -0.33
CLCC1-201ENST00000302500 SHHQ15465 462 aa12.98□□□□□ -0.33
CLCC1-201ENST00000302500 UBE2SQ16763 222 aa12.98□□□□□ -0.33
CLCC1-201ENST00000302500 CELF3Q5SZQ8 465 aaKnown RBP12.98□□□□□ -0.33
CLCC1-201ENST00000302500 MFSD5Q6N075 450 aa12.98□□□□□ -0.33
CLCC1-201ENST00000302500 GPR153Q6NV75 609 aa12.98□□□□□ -0.33
CLCC1-201ENST00000302500 PPP1R18Q6NYC8 613 aa12.98□□□□□ -0.33
CLCC1-201ENST00000302500 NFRKBQ6P4R8 1299 aa12.98□□□□□ -0.33
CLCC1-201ENST00000302500 BLOC1S2Q6QNY1 142 aa12.98□□□□□ -0.33
CLCC1-201ENST00000302500 CCDC82Q8N4S0 544 aa12.98□□□□□ -0.33
CLCC1-201ENST00000302500 MTG1Q9BT17 334 aaPredicted RBP12.98□□□□□ -0.33
CLCC1-201ENST00000302500 UBE2OQ9C0C9 1292 aaKnown RBP12.98□□□□□ -0.33
CLCC1-201ENST00000302500 TRPV6Q9H1D0 765 aa12.98□□□□□ -0.33
CLCC1-201ENST00000302500 RIC8AQ9NPQ8 531 aa12.98□□□□□ -0.33
CLCC1-201ENST00000302500 POLR3EQ9NVU0 708 aa12.98□□□□□ -0.33
CLCC1-201ENST00000302500 UBIAD1Q9Y5Z9 338 aa12.98□□□□□ -0.33
CLCC1-201ENST00000302500 ESYT2A0FGR8 921 aa12.97□□□□□ -0.33
CLCC1-201ENST00000302500 GOLGA8AA7E2F4 631 aa12.97□□□□□ -0.33
CLCC1-201ENST00000302500 GOLGA8BA8MQT2 603 aa12.97□□□□□ -0.33
CLCC1-201ENST00000302500 B4DLN1 442 aa12.97□□□□□ -0.33
CLCC1-201ENST00000302500 RBAK-RBAKDNI3L0D1 243 aa12.97□□□□□ -0.33
CLCC1-201ENST00000302500 STAM2O75886 525 aa12.97□□□□□ -0.33
CLCC1-201ENST00000302500 KCNA2P16389 499 aa12.97□□□□□ -0.33
CLCC1-201ENST00000302500 MRPL12P52815 198 aaKnown RBP12.97□□□□□ -0.33
CLCC1-201ENST00000302500 NPY5RQ15761 445 aa12.97□□□□□ -0.33
CLCC1-201ENST00000302500 PFKFB3Q16875 520 aaPredicted RBP12.97□□□□□ -0.33
CLCC1-201ENST00000302500 NBPF20Q3BBV1 942 aa12.97□□□□□ -0.33
CLCC1-201ENST00000302500 TRAF7Q6Q0C0 670 aa12.97□□□□□ -0.33
CLCC1-201ENST00000302500 FCHSD1Q86WN1 690 aa12.97□□□□□ -0.33
CLCC1-201ENST00000302500 PPP1R13LQ8WUF5 828 aa12.97□□□□□ -0.33
CLCC1-201ENST00000302500 MPHOSPH6Q99547 160 aaKnown RBP12.97□□□□□ -0.33
CLCC1-201ENST00000302500 PSTPIP2Q9H939 334 aa12.97□□□□□ -0.33
CLCC1-201ENST00000302500 TRMT13Q9NUP7 481 aaKnown RBP12.97□□□□□ -0.33
CLCC1-201ENST00000302500 TMEM39AQ9NV64 488 aa12.97□□□□□ -0.33
CLCC1-201ENST00000302500 V9GY48 417 aaPredicted RBP12.97□□□□□ -0.33
CLCC1-201ENST00000302500 XIRP2A4UGR9 3374 aa12.97□□□□□ -0.33
CLCC1-201ENST00000302500 DCDC2CA8MYV0 355 aa12.96□□□□□ -0.33
CLCC1-201ENST00000302500 hCG_1984214I3L0E3 225 aa12.96□□□□□ -0.33
CLCC1-201ENST00000302500 KPNA6O60684 536 aa12.96□□□□□ -0.33
CLCC1-201ENST00000302500 ATP9AO75110 1047 aa12.96□□□□□ -0.33
CLCC1-201ENST00000302500 IFNAR1P17181 557 aa12.96□□□□□ -0.33
CLCC1-201ENST00000302500 CCND2P30279 289 aa12.96□□□□□ -0.33
CLCC1-201ENST00000302500 PTPN11Q06124 597 aaPredicted RBP12.96□□□□□ -0.33
CLCC1-201ENST00000302500 XRRA1Q6P2D8 792 aa12.96□□□□□ -0.33
CLCC1-201ENST00000302500 NOL8Q76FK4 1167 aaKnown RBP12.96□□□□□ -0.33
CLCC1-201ENST00000302500 ZNF713Q8N859 430 aaPredicted RBP12.96□□□□□ -0.33
CLCC1-201ENST00000302500 DHX38Q92620 1227 aaKnown RBP12.96□□□□□ -0.33
CLCC1-201ENST00000302500 SENP7Q9BQF6 1050 aa12.96□□□□□ -0.33
CLCC1-201ENST00000302500 UPF3BQ9BZI7 483 aaKnown RBP12.96□□□□□ -0.33
CLCC1-201ENST00000302500 ZMYND12Q9H0C1 365 aa12.96□□□□□ -0.33
CLCC1-201ENST00000302500 PRDM5Q9NQX1 630 aaPredicted RBP12.96□□□□□ -0.33
CLCC1-201ENST00000302500 SEC63Q9UGP8 760 aaKnown RBP12.96□□□□□ -0.33
CLCC1-201ENST00000302500 MRVI1Q9Y6F6 885 aa12.96□□□□□ -0.33
CLCC1-201ENST00000302500 M0R2N6 131 aa12.95□□□□□ -0.34
CLCC1-201ENST00000302500 PRPF3O43395 683 aaKnown RBP12.95□□□□□ -0.34
CLCC1-201ENST00000302500 ZEB2O60315 1214 aa12.95□□□□□ -0.34
CLCC1-201ENST00000302500 GGPS1O95749 300 aa12.95□□□□□ -0.34
CLCC1-201ENST00000302500 CENPBP07199 599 aaPredicted RBP12.95□□□□□ -0.34
CLCC1-201ENST00000302500 MYCLP12524 364 aaPredicted RBP12.95□□□□□ -0.34
CLCC1-201ENST00000302500 METAP2P50579 478 aaKnown RBP eCLIP12.95□□□□□ -0.34
CLCC1-201ENST00000302500 ANAPC15P60006 121 aa12.95□□□□□ -0.34
CLCC1-201ENST00000302500 ADAM17P78536 824 aa12.95□□□□□ -0.34
CLCC1-201ENST00000302500 LAMC2Q13753 1193 aa12.95□□□□□ -0.34
CLCC1-201ENST00000302500 TRIM71Q2Q1W2 868 aaKnown RBP12.95□□□□□ -0.34
CLCC1-201ENST00000302500 C8orf34Q49A92 452 aa12.95□□□□□ -0.34
CLCC1-201ENST00000302500 TMEM240Q5SV17 173 aa12.95□□□□□ -0.34
CLCC1-201ENST00000302500 KCNV1Q6PIU1 500 aa12.95□□□□□ -0.34
CLCC1-201ENST00000302500 WNT8BQ93098 351 aa12.95□□□□□ -0.34
CLCC1-201ENST00000302500 ZNF274Q96GC6 653 aaPredicted RBP12.95□□□□□ -0.34
CLCC1-201ENST00000302500 KIF2CQ99661 725 aa12.95□□□□□ -0.34
CLCC1-201ENST00000302500 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.95□□□□□ -0.341e-7■□□□□ 9.3
CLCC1-201ENST00000302500 PCDHA6Q9UN73 950 aa12.95□□□□□ -0.34
CLCC1-201ENST00000302500 PCDHA8Q9Y5H6 950 aa12.95□□□□□ -0.34
CLCC1-201ENST00000302500 IGLV3-22A0A075B6J6 115 aa12.94□□□□□ -0.34
CLCC1-201ENST00000302500 FIBPO43427 364 aa12.94□□□□□ -0.34
CLCC1-201ENST00000302500 PPFIA4O75335 1185 aa12.94□□□□□ -0.34
CLCC1-201ENST00000302500 MYL3P08590 195 aa12.94□□□□□ -0.34
CLCC1-201ENST00000302500 SCG2P13521 617 aa12.94□□□□□ -0.34
CLCC1-201ENST00000302500 CSF2RAP15509 400 aa12.94□□□□□ -0.34
CLCC1-201ENST00000302500 RAG1P15918 1043 aa12.94□□□□□ -0.34
CLCC1-201ENST00000302500 PSMA5P28066 241 aa12.94□□□□□ -0.34
CLCC1-201ENST00000302500 CYP2C18P33260 490 aa12.94□□□□□ -0.34
CLCC1-201ENST00000302500 SREBF1P36956 1147 aa12.94□□□□□ -0.34
CLCC1-201ENST00000302500 ST3GAL1Q11201 340 aa12.94□□□□□ -0.34
CLCC1-201ENST00000302500 MKRN4PQ13434 485 aaPredicted RBP12.94□□□□□ -0.34
CLCC1-201ENST00000302500 GDF6Q6KF10 455 aaPredicted RBP12.94□□□□□ -0.34
CLCC1-201ENST00000302500 METTL7BQ6UX53 244 aa12.94□□□□□ -0.34
CLCC1-201ENST00000302500 HEATR3Q7Z4Q2 680 aa12.94□□□□□ -0.34
CLCC1-201ENST00000302500 CYP2W1Q8TAV3 490 aa12.94□□□□□ -0.34
CLCC1-201ENST00000302500 PHKBQ93100 1093 aa12.94□□□□□ -0.34
CLCC1-201ENST00000302500 GPRASP2Q96D09 838 aa12.94□□□□□ -0.34
CLCC1-201ENST00000302500 GPR20Q99678 358 aa12.94□□□□□ -0.34
CLCC1-201ENST00000302500 RNF26Q9BY78 433 aaPredicted RBP12.94□□□□□ -0.34
CLCC1-201ENST00000302500 NCOA5Q9HCD5 579 aaKnown RBP12.94□□□□□ -0.34
CLCC1-201ENST00000302500 GTF2IRD1Q9UHL9 959 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms