RNA–Protein interactions for RNA: ENST00000302251.9

PDGFD-201, Transcript of platelet derived growth factor D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDGFD, Length 4,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-201ENST00000302251 SETDB2Q96T68 719 aa13.29□□□□□ -0.28
PDGFD-201ENST00000302251 RAB17Q9H0T7 212 aa13.29□□□□□ -0.28
PDGFD-201ENST00000302251 VIPAS39Q9H9C1 493 aa13.29□□□□□ -0.28
PDGFD-201ENST00000302251 CPSF2Q9P2I0 782 aaKnown RBP13.29□□□□□ -0.28
PDGFD-201ENST00000302251 ADAMTSL3P82987 1691 aa13.29□□□□□ -0.28
PDGFD-201ENST00000302251 PHF20L1A8MW92 1017 aa13.29□□□□□ -0.28
PDGFD-201ENST00000302251 TRAPPC10P48553 1259 aa13.29□□□□□ -0.28
PDGFD-201ENST00000302251 STK4Q13043 487 aa13.29□□□□□ -0.28
PDGFD-201ENST00000302251 LRRC47Q8N1G4 583 aaKnown RBP13.29□□□□□ -0.28
PDGFD-201ENST00000302251 COA7Q96BR5 231 aa13.29□□□□□ -0.28
PDGFD-201ENST00000302251 NAP1L3Q99457 506 aaPredicted RBP13.29□□□□□ -0.28
PDGFD-201ENST00000302251 HAUS2Q9NVX0 235 aa13.29□□□□□ -0.28
PDGFD-201ENST00000302251 ARPP21Q9UBL0 812 aaPredicted RBP13.29□□□□□ -0.28
PDGFD-201ENST00000302251 PALLDQ8WX93 1383 aa13.29□□□□□ -0.28
PDGFD-201ENST00000302251 MAP2K7O14733 419 aa13.28□□□□□ -0.28
PDGFD-201ENST00000302251 CLIC2O15247 247 aa13.28□□□□□ -0.28
PDGFD-201ENST00000302251 NR2F2P24468 414 aa13.28□□□□□ -0.28
PDGFD-201ENST00000302251 CYP2J2P51589 502 aa13.28□□□□□ -0.28
PDGFD-201ENST00000302251 ADCY7P51828 1080 aa13.28□□□□□ -0.28
PDGFD-201ENST00000302251 KCNQ4P56696 695 aa13.28□□□□□ -0.28
PDGFD-201ENST00000302251 NUCKS1Q9H1E3 243 aaKnown RBP13.28□□□□□ -0.28
PDGFD-201ENST00000302251 SCN11AQ9UI33 1791 aa13.28□□□□□ -0.28
PDGFD-201ENST00000302251 HMGB1P1B2RPK0 211 aaPredicted RBP13.28□□□□□ -0.28
PDGFD-201ENST00000302251 ERVV-2B6SEH9 535 aa13.28□□□□□ -0.28
PDGFD-201ENST00000302251 PGRMC1O00264 195 aaKnown RBP13.28□□□□□ -0.28
PDGFD-201ENST00000302251 HIP1RO75146 1068 aa13.28□□□□□ -0.28
PDGFD-201ENST00000302251 MKRN4PQ13434 485 aaPredicted RBP13.28□□□□□ -0.28
PDGFD-201ENST00000302251 TMTC3Q6ZXV5 915 aa13.28□□□□□ -0.28
PDGFD-201ENST00000302251 TAOK1Q7L7X3 1001 aa13.28□□□□□ -0.28
PDGFD-201ENST00000302251 ZNF473Q8WTR7 871 aaKnown RBP13.28□□□□□ -0.28
PDGFD-201ENST00000302251 SUFUQ9UMX1 484 aa13.28□□□□□ -0.28
PDGFD-201ENST00000302251 SNX24Q9Y343 169 aa13.28□□□□□ -0.28
PDGFD-201ENST00000302251 ANKARQ7Z5J8 1434 aa13.28□□□□□ -0.28
PDGFD-201ENST00000302251 UTYO14607 1347 aa13.28□□□□□ -0.28
PDGFD-201ENST00000302251 MAP3K15Q6ZN16 1313 aa13.28□□□□□ -0.28
PDGFD-201ENST00000302251 ZSCAN5CA6NGD5 496 aaPredicted RBP13.28□□□□□ -0.28
PDGFD-201ENST00000302251 HDLBPQ00341 1268 aaKnown RBP13.28□□□□□ -0.28
PDGFD-201ENST00000302251 EXOC3L4Q17RC7 722 aa13.28□□□□□ -0.28
PDGFD-201ENST00000302251 LBHD1Q9BQE6 289 aaPredicted RBP13.28□□□□□ -0.28
PDGFD-201ENST00000302251 FAM167BQ9BTA0 163 aa13.28□□□□□ -0.28
PDGFD-201ENST00000302251 AMACRQ9UHK6 382 aa13.28□□□□□ -0.28
PDGFD-201ENST00000302251 DAAM1Q9Y4D1 1078 aa13.28□□□□□ -0.28
PDGFD-201ENST00000302251 CAPN6Q9Y6Q1 641 aa13.28□□□□□ -0.28
PDGFD-201ENST00000302251 POTEMA6NI47 508 aa13.27□□□□□ -0.28
PDGFD-201ENST00000302251 LRRN2O75325 713 aa13.27□□□□□ -0.28
PDGFD-201ENST00000302251 DDAH1O94760 285 aa13.27□□□□□ -0.28
PDGFD-201ENST00000302251 KRT15P19012 456 aa13.27□□□□□ -0.28
PDGFD-201ENST00000302251 ALKBH5Q6P6C2 394 aaKnown RBP13.27□□□□□ -0.28
PDGFD-201ENST00000302251 TAB3Q8N5C8 712 aaPredicted RBP13.27□□□□□ -0.28
PDGFD-201ENST00000302251 MYCT1Q8N699 235 aa13.27□□□□□ -0.28
PDGFD-201ENST00000302251 GDAP1Q8TB36 358 aa13.27□□□□□ -0.28
PDGFD-201ENST00000302251 WHAMMQ8TF30 809 aa13.27□□□□□ -0.28
PDGFD-201ENST00000302251 EYA3Q99504 573 aa13.27□□□□□ -0.28
PDGFD-201ENST00000302251 CDHR2Q9BYE9 1310 aa13.27□□□□□ -0.28
PDGFD-201ENST00000302251 TARSL2A2RTX5 802 aaKnown RBP13.27□□□□□ -0.29
PDGFD-201ENST00000302251 MEIS1O00470 390 aa13.27□□□□□ -0.29
PDGFD-201ENST00000302251 RIMBP2O15034 1052 aa13.27□□□□□ -0.29
PDGFD-201ENST00000302251 GFPT2O94808 682 aa13.27□□□□□ -0.29
PDGFD-201ENST00000302251 TBX2Q13207 712 aaPredicted RBP13.27□□□□□ -0.29
PDGFD-201ENST00000302251 PABPC4Q13310 644 aaKnown RBP eCLIP13.27□□□□□ -0.29
PDGFD-201ENST00000302251 USH1GQ495M9 461 aa13.27□□□□□ -0.29
PDGFD-201ENST00000302251 KCNV2Q8TDN2 545 aa13.27□□□□□ -0.29
PDGFD-201ENST00000302251 STAG1Q8WVM7 1258 aa13.27□□□□□ -0.29
PDGFD-201ENST00000302251 ATP6V1G3Q96LB4 118 aa13.27□□□□□ -0.29
PDGFD-201ENST00000302251 IKBKGQ9Y6K9 419 aa13.27□□□□□ -0.29
PDGFD-201ENST00000302251 STK36Q9NRP7 1315 aa13.27□□□□□ -0.29
PDGFD-201ENST00000302251 CCDC169A6NNP5 214 aa13.27□□□□□ -0.29
PDGFD-201ENST00000302251 DAPK3O43293 454 aa13.27□□□□□ -0.29
PDGFD-201ENST00000302251 POTEJP0CG39 1038 aa13.27□□□□□ -0.29
PDGFD-201ENST00000302251 MESDQ14696 234 aa13.27□□□□□ -0.29
PDGFD-201ENST00000302251 LRRC14Q15048 493 aa13.27□□□□□ -0.29
PDGFD-201ENST00000302251 CCDC174Q6PII3 467 aa13.27□□□□□ -0.29
PDGFD-201ENST00000302251 TRAPPC11Q7Z392 1133 aa13.27□□□□□ -0.29
PDGFD-201ENST00000302251 SRBD1Q8N5C6 995 aaKnown RBP13.27□□□□□ -0.29
PDGFD-201ENST00000302251 AGXT2Q9BYV1 514 aa13.27□□□□□ -0.29
PDGFD-201ENST00000302251 EPB41L4AQ9HCS5 686 aaPredicted RBP13.27□□□□□ -0.29
PDGFD-201ENST00000302251 FRMD4BQ9Y2L6 1034 aa13.27□□□□□ -0.29
PDGFD-201ENST00000302251 SLIT3O75094 1523 aa13.27□□□□□ -0.29
PDGFD-201ENST00000302251 CPDO75976 1380 aa13.26□□□□□ -0.29
PDGFD-201ENST00000302251 TULP2O00295 520 aa13.26□□□□□ -0.29
PDGFD-201ENST00000302251 PSMD14O00487 310 aa13.26□□□□□ -0.29
PDGFD-201ENST00000302251 FGGP02679 453 aa13.26□□□□□ -0.29
PDGFD-201ENST00000302251 ALDH3A1P30838 453 aa13.26□□□□□ -0.29
PDGFD-201ENST00000302251 ZNF211Q13398 564 aaPredicted RBP13.26□□□□□ -0.29
PDGFD-201ENST00000302251 CCDC38Q502W7 563 aa13.26□□□□□ -0.29
PDGFD-201ENST00000302251 STXBP4Q6ZWJ1 553 aa13.26□□□□□ -0.29
PDGFD-201ENST00000302251 SYCE1Q8N0S2 351 aa13.26□□□□□ -0.29
PDGFD-201ENST00000302251 UBL4BQ8N7F7 174 aa13.26□□□□□ -0.29
PDGFD-201ENST00000302251 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.26□□□□□ -0.29
PDGFD-201ENST00000302251 HVCN1Q96D96 273 aa13.26□□□□□ -0.29
PDGFD-201ENST00000302251 HOMER3Q9NSC5 361 aa13.26□□□□□ -0.29
PDGFD-201ENST00000302251 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.26□□□□□ -0.29
PDGFD-201ENST00000302251 KLHL14Q9P2G3 628 aa13.26□□□□□ -0.29
PDGFD-201ENST00000302251 RAB21Q9UL25 225 aa13.26□□□□□ -0.29
PDGFD-201ENST00000302251 EXOC3O60645 756 aa13.26□□□□□ -0.29
PDGFD-201ENST00000302251 ATP2C1P98194 919 aaPredicted RBP13.26□□□□□ -0.29
PDGFD-201ENST00000302251 SNX1Q13596 522 aa13.26□□□□□ -0.29
PDGFD-201ENST00000302251 TBC1D10BQ4KMP7 808 aaPredicted RBP13.26□□□□□ -0.29
PDGFD-201ENST00000302251 EARS2Q5JPH6 523 aaKnown RBP13.26□□□□□ -0.29
PDGFD-201ENST00000302251 ADSSL1Q8N142 457 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms