RNA–Protein interactions for RNA: ENST00000301935.9

UBXN1-202, Transcript of UBX domain protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBXN1, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-202ENST00000301935 BICD2Q8TD16 824 aa17.3■□□□□ 0.36
UBXN1-202ENST00000301935 SYMPKQ92797 1274 aaKnown RBP17.3■□□□□ 0.36
UBXN1-202ENST00000301935 AGBL1Q96MI9 1066 aa17.3■□□□□ 0.36
UBXN1-202ENST00000301935 BRMS1Q9HCU9 246 aa17.3■□□□□ 0.36
UBXN1-202ENST00000301935 ESYT2A0FGR8 921 aa17.29■□□□□ 0.36
UBXN1-202ENST00000301935 SOWAHBA6NEL2 793 aa17.29■□□□□ 0.36
UBXN1-202ENST00000301935 ASB14A6NK59 587 aa17.29■□□□□ 0.36
UBXN1-202ENST00000301935 CD4P01730 458 aa17.29■□□□□ 0.36
UBXN1-202ENST00000301935 ICAM1P05362 532 aa17.29■□□□□ 0.36
UBXN1-202ENST00000301935 GNA11P29992 359 aa17.29■□□□□ 0.36
UBXN1-202ENST00000301935 PBX2P40425 430 aa17.29■□□□□ 0.36
UBXN1-202ENST00000301935 BEX3Q00994 111 aa17.29■□□□□ 0.36
UBXN1-202ENST00000301935 TNFAIP2Q03169 654 aa17.29■□□□□ 0.36
UBXN1-202ENST00000301935 TKFCQ3LXA3 575 aa17.29■□□□□ 0.36
UBXN1-202ENST00000301935 MCTP2Q6DN12 878 aa17.29■□□□□ 0.36
UBXN1-202ENST00000301935 HEATR3Q7Z4Q2 680 aa17.29■□□□□ 0.36
UBXN1-202ENST00000301935 TLK2Q86UE8 772 aa17.29■□□□□ 0.36
UBXN1-202ENST00000301935 SAMD3Q8N6K7 520 aa17.29■□□□□ 0.36
UBXN1-202ENST00000301935 PIBF1Q8WXW3 757 aa17.29■□□□□ 0.36
UBXN1-202ENST00000301935 GNEQ9Y223 722 aaKnown RBP17.29■□□□□ 0.36
UBXN1-202ENST00000301935 PCDHA1Q9Y5I3 950 aa17.29■□□□□ 0.36
UBXN1-202ENST00000301935 hCG_1642624A0A1W2PR95 340 aa17.28■□□□□ 0.36
UBXN1-202ENST00000301935 GRXCR1A8MXD5 290 aa17.28■□□□□ 0.36
UBXN1-202ENST00000301935 STXBP3O00186 592 aa17.28■□□□□ 0.36
UBXN1-202ENST00000301935 PPFIA3O75145 1194 aa17.28■□□□□ 0.36
UBXN1-202ENST00000301935 ZSCAN22P10073 491 aaPredicted RBP17.28■□□□□ 0.36
UBXN1-202ENST00000301935 ACRP10323 421 aa17.28■□□□□ 0.36
UBXN1-202ENST00000301935 NAPAP54920 295 aa17.28■□□□□ 0.36
UBXN1-202ENST00000301935 NLRP5P59047 1200 aa17.28■□□□□ 0.36
UBXN1-202ENST00000301935 KRT40Q6A162 431 aa17.28■□□□□ 0.36
UBXN1-202ENST00000301935 WWC2Q6AWC2 1192 aa17.28■□□□□ 0.36
UBXN1-202ENST00000301935 CXCL17Q6UXB2 119 aa17.28■□□□□ 0.36
UBXN1-202ENST00000301935 ZNF365Q70YC5 407 aa17.28■□□□□ 0.36
UBXN1-202ENST00000301935 SLC43A3Q8NBI5 491 aa17.28■□□□□ 0.36
UBXN1-202ENST00000301935 TRERF1Q96PN7 1200 aa17.28■□□□□ 0.36
UBXN1-202ENST00000301935 PHF20Q9BVI0 1012 aa17.28■□□□□ 0.36
UBXN1-202ENST00000301935 ZSCAN16Q9H4T2 348 aaPredicted RBP17.28■□□□□ 0.36
UBXN1-202ENST00000301935 C6orf50Q9HD87 102 aa17.28■□□□□ 0.36
UBXN1-202ENST00000301935 MRPL11Q9Y3B7 192 aaKnown RBP17.28■□□□□ 0.36
UBXN1-202ENST00000301935 ATP6V1DQ9Y5K8 247 aa17.28■□□□□ 0.36
UBXN1-202ENST00000301935 ABCB11O95342 1321 aa17.27■□□□□ 0.36
UBXN1-202ENST00000301935 VPS37CA5D8V6 355 aaPredicted RBP17.27■□□□□ 0.36
UBXN1-202ENST00000301935 CABYRO75952 493 aa17.27■□□□□ 0.36
UBXN1-202ENST00000301935 BRD1O95696 1058 aa17.27■□□□□ 0.36
UBXN1-202ENST00000301935 MMP1P03956 469 aa17.27■□□□□ 0.36
UBXN1-202ENST00000301935 ALAS1P13196 640 aa17.27■□□□□ 0.36
UBXN1-202ENST00000301935 CYP2C18P33260 490 aa17.27■□□□□ 0.36
UBXN1-202ENST00000301935 MRPL12P52815 198 aaKnown RBP17.27■□□□□ 0.36
UBXN1-202ENST00000301935 FSCN1Q16658 493 aaKnown RBP17.27■□□□□ 0.36
UBXN1-202ENST00000301935 TJAP1Q5JTD0 557 aa17.27■□□□□ 0.36
UBXN1-202ENST00000301935 DAGLBQ8NCG7 672 aa17.27■□□□□ 0.36
UBXN1-202ENST00000301935 GAS2L1Q99501 681 aaPredicted RBP17.27■□□□□ 0.36
UBXN1-202ENST00000301935 ZMYND12Q9H0C1 365 aa17.27■□□□□ 0.36
UBXN1-202ENST00000301935 IL23AQ9NPF7 189 aa17.27■□□□□ 0.36
UBXN1-202ENST00000301935 VPS54Q9P1Q0 977 aa17.27■□□□□ 0.36
UBXN1-202ENST00000301935 MTMR6Q9Y217 621 aa17.27■□□□□ 0.36
UBXN1-202ENST00000301935 SMPD1P17405 629 aa17.26■□□□□ 0.35
UBXN1-202ENST00000301935 HERVK_113Q902F9 699 aa17.26■□□□□ 0.35
UBXN1-202ENST00000301935 AIFM3Q96NN9 605 aa17.26■□□□□ 0.35
UBXN1-202ENST00000301935 FOXP1Q9H334 677 aaPredicted RBP17.26■□□□□ 0.35
UBXN1-202ENST00000301935 HIPK3Q9H422 1215 aa17.26■□□□□ 0.35
UBXN1-202ENST00000301935 PRDM6Q9NQX0 595 aa17.26■□□□□ 0.35
UBXN1-202ENST00000301935 MAP3K20Q9NYL2 800 aaKnown RBP17.26■□□□□ 0.35
UBXN1-202ENST00000301935 DDX49Q9Y6V7 483 aaKnown RBP17.26■□□□□ 0.35
UBXN1-202ENST00000301935 CHD9Q3L8U1 2897 aa17.26■□□□□ 0.35
UBXN1-202ENST00000301935 UMODL1Q5DID0 1318 aa17.25■□□□□ 0.35
UBXN1-202ENST00000301935 SMCO2A6NFE2 343 aa17.25■□□□□ 0.35
UBXN1-202ENST00000301935 PTGS1P23219 599 aa17.25■□□□□ 0.35
UBXN1-202ENST00000301935 KRT2P35908 639 aa17.25■□□□□ 0.35
UBXN1-202ENST00000301935 ITGA7Q13683 1181 aa17.25■□□□□ 0.35
UBXN1-202ENST00000301935 GNL2Q13823 731 aaKnown RBP17.25■□□□□ 0.35
UBXN1-202ENST00000301935 RAB30Q15771 203 aa17.25■□□□□ 0.35
UBXN1-202ENST00000301935 MUM1L1Q5H9M0 696 aa17.25■□□□□ 0.35
UBXN1-202ENST00000301935 BRAPQ7Z569 592 aa17.25■□□□□ 0.35
UBXN1-202ENST00000301935 MCF2L2Q86YR7 1114 aa17.25■□□□□ 0.35
UBXN1-202ENST00000301935 FBXO16Q8IX29 292 aaPredicted RBP17.25■□□□□ 0.35
UBXN1-202ENST00000301935 GPKOWQ92917 476 aaPredicted RBP eCLIP17.25■□□□□ 0.35
UBXN1-202ENST00000301935 CUL5Q93034 780 aa17.25■□□□□ 0.35
UBXN1-202ENST00000301935 AP5M1Q9H0R1 490 aa17.25■□□□□ 0.35
UBXN1-202ENST00000301935 MTIF3Q9H2K0 278 aaKnown RBP17.25■□□□□ 0.35
UBXN1-202ENST00000301935 PRDM12Q9H4Q4 367 aa17.25■□□□□ 0.35
UBXN1-202ENST00000301935 RIC8AQ9NPQ8 531 aa17.25■□□□□ 0.35
UBXN1-202ENST00000301935 PDGFCQ9NRA1 345 aa17.25■□□□□ 0.35
UBXN1-202ENST00000301935 CYP39A1Q9NYL5 469 aa17.25■□□□□ 0.35
UBXN1-202ENST00000301935 CXXC1Q9P0U4 656 aaPredicted RBP17.25■□□□□ 0.35
UBXN1-202ENST00000301935 CCPG1Q9ULG6 757 aa17.25■□□□□ 0.35
UBXN1-202ENST00000301935 PCDHA4Q9UN74 947 aa17.25■□□□□ 0.35
UBXN1-202ENST00000301935 GRIN2DO15399 1336 aa17.24■□□□□ 0.35
UBXN1-202ENST00000301935 ZEB2O60315 1214 aa17.24■□□□□ 0.35
UBXN1-202ENST00000301935 PPP1R11O60927 126 aaPredicted RBP17.24■□□□□ 0.35
UBXN1-202ENST00000301935 U2AF2P26368 475 aaKnown RBP eCLIP17.24■□□□□ 0.355e-8■■■□□ 16.8
UBXN1-202ENST00000301935 ADCY7P51828 1080 aa17.24■□□□□ 0.35
UBXN1-202ENST00000301935 SNAP25P60880 206 aa17.24■□□□□ 0.35
UBXN1-202ENST00000301935 TAPT1Q6NXT6 567 aa17.24■□□□□ 0.35
UBXN1-202ENST00000301935 EEPD1Q7L9B9 569 aa17.24■□□□□ 0.35
UBXN1-202ENST00000301935 BLIDQ8IZY5 108 aa17.24■□□□□ 0.35
UBXN1-202ENST00000301935 SEZ6LQ9BYH1 1024 aa17.24■□□□□ 0.35
UBXN1-202ENST00000301935 PSTPIP2Q9H939 334 aa17.24■□□□□ 0.35
UBXN1-202ENST00000301935 VTA1Q9NP79 307 aa17.24■□□□□ 0.35
UBXN1-202ENST00000301935 Q9Y3F1 56 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms