RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 NID2Q14112 1375 aa16.12■□□□□ 0.17
COL6A2-201ENST00000300527 USP17L8P0C7I0 530 aa16.12■□□□□ 0.17
COL6A2-201ENST00000300527 PRLRP16471 622 aa16.12■□□□□ 0.17
COL6A2-201ENST00000300527 FAM133BQ5BKY9 247 aaKnown RBP16.12■□□□□ 0.17
COL6A2-201ENST00000300527 TAX1BP1Q86VP1 789 aa16.12■□□□□ 0.17
COL6A2-201ENST00000300527 FUKQ8N0W3 1084 aa16.12■□□□□ 0.17
COL6A2-201ENST00000300527 WHAMMQ8TF30 809 aa16.12■□□□□ 0.17
COL6A2-201ENST00000300527 TMBIM4Q9HC24 238 aa16.12■□□□□ 0.17
COL6A2-201ENST00000300527 CNOT8Q9UFF9 292 aaKnown RBP16.12■□□□□ 0.17
COL6A2-201ENST00000300527 AMACRQ9UHK6 382 aa16.12■□□□□ 0.17
COL6A2-201ENST00000300527 TMEM94Q12767 1356 aa16.12■□□□□ 0.17
COL6A2-201ENST00000300527 A0A087X0T9 212 aa16.11■□□□□ 0.17
COL6A2-201ENST00000300527 FAM228BP0C875 321 aa16.11■□□□□ 0.17
COL6A2-201ENST00000300527 GLE1Q53GS7 698 aaKnown RBP16.11■□□□□ 0.17
COL6A2-201ENST00000300527 RAPGEF5Q92565 580 aa16.11■□□□□ 0.17
COL6A2-201ENST00000300527 GJA10Q969M2 543 aa16.11■□□□□ 0.17
COL6A2-201ENST00000300527 HVCN1Q96D96 273 aa16.11■□□□□ 0.17
COL6A2-201ENST00000300527 CELF4Q9BZC1 486 aaKnown RBP16.11■□□□□ 0.17
COL6A2-201ENST00000300527 TAF1DQ9H5J8 278 aaPredicted RBP16.11■□□□□ 0.17
COL6A2-201ENST00000300527 TFCP2L1Q9NZI6 479 aa16.11■□□□□ 0.17
COL6A2-201ENST00000300527 ATP8A1Q9Y2Q0 1164 aa16.11■□□□□ 0.17
COL6A2-201ENST00000300527 IFNAR2P48551 515 aa16.11■□□□□ 0.17
COL6A2-201ENST00000300527 THOC1Q96FV9 657 aaKnown RBP16.11■□□□□ 0.17
COL6A2-201ENST00000300527 MCM8Q9UJA3 840 aa16.11■□□□□ 0.17
COL6A2-201ENST00000300527 TNS3Q68CZ2 1445 aa16.11■□□□□ 0.17
COL6A2-201ENST00000300527 SCN11AQ9UI33 1791 aa16.11■□□□□ 0.17
COL6A2-201ENST00000300527 A0A1W2PQJ5 194 aa16.11■□□□□ 0.17
COL6A2-201ENST00000300527 MYMKA6NI61 221 aa16.11■□□□□ 0.17
COL6A2-201ENST00000300527 DHX9Q08211 1270 aaKnown RBP16.11■□□□□ 0.17
COL6A2-201ENST00000300527 CDC37Q16543 378 aaPredicted RBP16.11■□□□□ 0.17
COL6A2-201ENST00000300527 PREPLQ4J6C6 727 aaPredicted RBP16.11■□□□□ 0.17
COL6A2-201ENST00000300527 FAM83BQ5T0W9 1011 aa16.11■□□□□ 0.17
COL6A2-201ENST00000300527 GKAP1Q5VSY0 366 aaPredicted RBP16.11■□□□□ 0.17
COL6A2-201ENST00000300527 TSG101Q99816 390 aa16.11■□□□□ 0.17
COL6A2-201ENST00000300527 RIOK1Q9BRS2 568 aaKnown RBP16.11■□□□□ 0.17
COL6A2-201ENST00000300527 NEUROG2Q9H2A3 272 aa16.11■□□□□ 0.17
COL6A2-201ENST00000300527 KRIT1O00522 736 aa16.1■□□□□ 0.17
COL6A2-201ENST00000300527 BUB1BO60566 1050 aaPredicted RBP16.1■□□□□ 0.17
COL6A2-201ENST00000300527 SCTRP47872 440 aa16.1■□□□□ 0.17
COL6A2-201ENST00000300527 ITIH3Q06033 890 aa16.1■□□□□ 0.17
COL6A2-201ENST00000300527 TBC1D1Q86TI0 1168 aaPredicted RBP16.1■□□□□ 0.17
COL6A2-201ENST00000300527 POTEMA6NI47 508 aa16.1■□□□□ 0.17
COL6A2-201ENST00000300527 CTNND1O60716 968 aaKnown RBP16.1■□□□□ 0.17
COL6A2-201ENST00000300527 RASSF9O75901 435 aa16.1■□□□□ 0.17
COL6A2-201ENST00000300527 COPB2P35606 906 aa16.1■□□□□ 0.17
COL6A2-201ENST00000300527 ZNF844Q08AG5 666 aa16.1■□□□□ 0.17
COL6A2-201ENST00000300527 BICDL1Q6ZP65 573 aa16.1■□□□□ 0.17
COL6A2-201ENST00000300527 SLC44A5Q8NCS7 719 aa16.1■□□□□ 0.17
COL6A2-201ENST00000300527 BAP1Q92560 729 aa16.1■□□□□ 0.17
COL6A2-201ENST00000300527 TACO1Q9BSH4 297 aaKnown RBP16.1■□□□□ 0.17
COL6A2-201ENST00000300527 CCSER1Q9C0I3 900 aa16.1■□□□□ 0.17
COL6A2-201ENST00000300527 LRRC4CQ9HCJ2 640 aa16.1■□□□□ 0.17
COL6A2-201ENST00000300527 ITGA4P13612 1032 aa16.1■□□□□ 0.17
COL6A2-201ENST00000300527 DDR1Q08345 913 aa16.1■□□□□ 0.17
COL6A2-201ENST00000300527 ANKRD20A8PQ5CZ79 823 aa16.1■□□□□ 0.17
COL6A2-201ENST00000300527 TSKSQ9UJT2 592 aa16.1■□□□□ 0.17
COL6A2-201ENST00000300527 AKAP11Q9UKA4 1901 aa16.09■□□□□ 0.17
COL6A2-201ENST00000300527 PEX19P40855 299 aa16.09■□□□□ 0.17
COL6A2-201ENST00000300527 PPP2R2AP63151 447 aa16.09■□□□□ 0.17
COL6A2-201ENST00000300527 CDK17Q00537 523 aa16.09■□□□□ 0.17
COL6A2-201ENST00000300527 MYO1EQ12965 1108 aa16.09■□□□□ 0.17
COL6A2-201ENST00000300527 ACCSLQ4AC99 568 aa16.09■□□□□ 0.17
COL6A2-201ENST00000300527 SOGA3Q5TF21 947 aa16.09■□□□□ 0.17
COL6A2-201ENST00000300527 BCL9LQ86UU0 1499 aa16.09■□□□□ 0.17
COL6A2-201ENST00000300527 LRRC45Q96CN5 670 aa16.09■□□□□ 0.17
COL6A2-201ENST00000300527 SGSM3Q96HU1 749 aa16.09■□□□□ 0.17
COL6A2-201ENST00000300527 SPAG5Q96R06 1193 aa16.09■□□□□ 0.17
COL6A2-201ENST00000300527 MTA3Q9BTC8 594 aa16.09■□□□□ 0.17
COL6A2-201ENST00000300527 TMEM260Q9NX78 707 aa16.09■□□□□ 0.17
COL6A2-201ENST00000300527 SART1O43290 800 aaKnown RBP16.09■□□□□ 0.17
COL6A2-201ENST00000300527 VIMP08670 466 aaKnown RBP16.09■□□□□ 0.17
COL6A2-201ENST00000300527 USP38Q8NB14 1042 aa16.09■□□□□ 0.17
COL6A2-201ENST00000300527 ACTN1P12814 892 aa16.09■□□□□ 0.17
COL6A2-201ENST00000300527 UAP1Q16222 522 aaPredicted RBP16.09■□□□□ 0.17
COL6A2-201ENST00000300527 CCDC152Q4G0S7 254 aa16.09■□□□□ 0.17
COL6A2-201ENST00000300527 CAVIN4Q5BKX8 364 aa16.09■□□□□ 0.17
COL6A2-201ENST00000300527 SPTY2D1Q68D10 685 aaPredicted RBP16.09■□□□□ 0.17
COL6A2-201ENST00000300527 ZSCAN29Q8IWY8 852 aaPredicted RBP16.09■□□□□ 0.17
COL6A2-201ENST00000300527 MIEF2Q96C03 454 aa16.09■□□□□ 0.17
COL6A2-201ENST00000300527 PNMA2Q9UL42 364 aa16.09■□□□□ 0.17
COL6A2-201ENST00000300527 CD2APQ9Y5K6 639 aa16.09■□□□□ 0.17
COL6A2-201ENST00000300527 GRID2IPA4D2P6 1211 aa16.08■□□□□ 0.16
COL6A2-201ENST00000300527 TLR2O60603 784 aa16.08■□□□□ 0.16
COL6A2-201ENST00000300527 FGFR1OPO95684 399 aaKnown RBP16.08■□□□□ 0.16
COL6A2-201ENST00000300527 ASIC2Q16515 512 aa16.08■□□□□ 0.16
COL6A2-201ENST00000300527 RUFY4Q6ZNE9 571 aa16.08■□□□□ 0.16
COL6A2-201ENST00000300527 TRIM51Q9BSJ1 452 aa16.08■□□□□ 0.16
COL6A2-201ENST00000300527 CRNKL1Q9BZJ0 848 aaKnown RBP16.08■□□□□ 0.16
COL6A2-201ENST00000300527 SAP30BPQ9UHR5 308 aaKnown RBP16.08■□□□□ 0.16
COL6A2-201ENST00000300527 SMCO2A6NFE2 343 aa16.08■□□□□ 0.16
COL6A2-201ENST00000300527 TTI1O43156 1089 aa16.08■□□□□ 0.16
COL6A2-201ENST00000300527 SLCO1A2P46721 670 aa16.08■□□□□ 0.16
COL6A2-201ENST00000300527 FIGNQ5HY92 759 aa16.08■□□□□ 0.16
COL6A2-201ENST00000300527 TCERG1LQ5VWI1 586 aa16.08■□□□□ 0.16
COL6A2-201ENST00000300527 PPP4R3AQ6IN85 833 aa16.08■□□□□ 0.16
COL6A2-201ENST00000300527 FAM228AQ86W67 206 aa16.08■□□□□ 0.16
COL6A2-201ENST00000300527 CCDC24Q8N4L8 307 aa16.08■□□□□ 0.16
COL6A2-201ENST00000300527 ACTR5Q9H9F9 607 aaPredicted RBP16.08■□□□□ 0.16
COL6A2-201ENST00000300527 L3MBTL1Q9Y468 752 aa16.08■□□□□ 0.16
COL6A2-201ENST00000300527 CLGNO14967 610 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms