RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 PCNX4Q63HM2 1172 aa17.61■□□□□ 0.41
HERPUD1-201ENST00000300302 NCAPH2Q6IBW4 605 aa17.61■□□□□ 0.41
HERPUD1-201ENST00000300302 NIPA1Q7RTP0 329 aa17.61■□□□□ 0.41
HERPUD1-201ENST00000300302 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.61■□□□□ 0.41
HERPUD1-201ENST00000300302 ENOX1Q8TC92 643 aaKnown RBP17.61■□□□□ 0.41
HERPUD1-201ENST00000300302 NUDT12Q9BQG2 462 aa17.61■□□□□ 0.41
HERPUD1-201ENST00000300302 MXRA8Q9BRK3 442 aa17.61■□□□□ 0.41
HERPUD1-201ENST00000300302 TRIM9Q9C026 710 aa17.61■□□□□ 0.41
HERPUD1-201ENST00000300302 BLOC1S4Q9NUP1 217 aa17.61■□□□□ 0.41
HERPUD1-201ENST00000300302 BCRP11274 1271 aa17.61■□□□□ 0.41
HERPUD1-201ENST00000300302 PLS1Q14651 629 aa17.61■□□□□ 0.41
HERPUD1-201ENST00000300302 LRCH2Q5VUJ6 765 aa17.61■□□□□ 0.41
HERPUD1-201ENST00000300302 SLC30A10Q6XR72 485 aa17.61■□□□□ 0.41
HERPUD1-201ENST00000300302 SLC5A5Q92911 643 aa17.61■□□□□ 0.41
HERPUD1-201ENST00000300302 OPTNQ96CV9 577 aa17.61■□□□□ 0.41
HERPUD1-201ENST00000300302 ACAD9Q9H845 621 aa17.61■□□□□ 0.41
HERPUD1-201ENST00000300302 VAV3Q9UKW4 847 aa17.61■□□□□ 0.41
HERPUD1-201ENST00000300302 GOLGA6L6A8MZA4 724 aa17.6■□□□□ 0.41
HERPUD1-201ENST00000300302 IRX3P78415 501 aaPredicted RBP17.6■□□□□ 0.41
HERPUD1-201ENST00000300302 DHX8Q14562 1220 aaKnown RBP17.6■□□□□ 0.41
HERPUD1-201ENST00000300302 LDLRAD1Q5T700 205 aa17.6■□□□□ 0.41
HERPUD1-201ENST00000300302 FASTKD5Q7L8L6 764 aaKnown RBP17.6■□□□□ 0.41
HERPUD1-201ENST00000300302 RMDN3Q96TC7 470 aa17.6■□□□□ 0.41
HERPUD1-201ENST00000300302 ZNF577Q9BSK1 485 aa17.6■□□□□ 0.41
HERPUD1-201ENST00000300302 WDR11Q9BZH6 1224 aa17.6■□□□□ 0.41
HERPUD1-201ENST00000300302 GAS7O60861 476 aa17.59■□□□□ 0.41
HERPUD1-201ENST00000300302 RHOBTB3O94955 611 aa17.59■□□□□ 0.41
HERPUD1-201ENST00000300302 RPA1P27694 616 aa17.59■□□□□ 0.41
HERPUD1-201ENST00000300302 ASIC1P78348 528 aa17.59■□□□□ 0.41
HERPUD1-201ENST00000300302 PABPC4Q13310 644 aaKnown RBP eCLIP17.59■□□□□ 0.412e-12■■■■■ 31.3
HERPUD1-201ENST00000300302 BAATQ14032 418 aaPredicted RBP17.59■□□□□ 0.41
HERPUD1-201ENST00000300302 MCM6Q14566 821 aa17.59■□□□□ 0.41
HERPUD1-201ENST00000300302 KMT5BQ4FZB7 885 aa17.59■□□□□ 0.41
HERPUD1-201ENST00000300302 ARHGEF16Q5VV41 709 aa17.59■□□□□ 0.41
HERPUD1-201ENST00000300302 XRRA1Q6P2D8 792 aa17.59■□□□□ 0.41
HERPUD1-201ENST00000300302 KCTD17Q8N5Z5 321 aa17.59■□□□□ 0.41
HERPUD1-201ENST00000300302 MRFAP1L1Q96HT8 127 aa17.59■□□□□ 0.41
HERPUD1-201ENST00000300302 TAAR1Q96RJ0 339 aa17.59■□□□□ 0.41
HERPUD1-201ENST00000300302 AGTPBP1Q9UPW5 1226 aa17.59■□□□□ 0.41
HERPUD1-201ENST00000300302 KIAA1024Q9UPX6 916 aa17.59■□□□□ 0.41
HERPUD1-201ENST00000300302 KLRC4O43908 158 aa17.58■□□□□ 0.41
HERPUD1-201ENST00000300302 PSMD10O75832 226 aa17.58■□□□□ 0.41
HERPUD1-201ENST00000300302 CDC25BP30305 580 aa17.58■□□□□ 0.41
HERPUD1-201ENST00000300302 PPP2R5CQ13362 524 aa17.58■□□□□ 0.41
HERPUD1-201ENST00000300302 PGM5Q15124 567 aa17.58■□□□□ 0.41
HERPUD1-201ENST00000300302 LBX2Q6XYB7 198 aa17.58■□□□□ 0.41
HERPUD1-201ENST00000300302 OTOP1Q7RTM1 612 aa17.58■□□□□ 0.41
HERPUD1-201ENST00000300302 CHST13Q8NET6 341 aa17.58■□□□□ 0.41
HERPUD1-201ENST00000300302 SLC10A4Q96EP9 437 aa17.58■□□□□ 0.41
HERPUD1-201ENST00000300302 PXMP2Q9NR77 195 aa17.58■□□□□ 0.41
HERPUD1-201ENST00000300302 EXOC1Q9NV70 894 aa17.58■□□□□ 0.41
HERPUD1-201ENST00000300302 POTEB3A0JP26 581 aa17.58■□□□□ 0.4
HERPUD1-201ENST00000300302 PPP1R3GB7ZBB8 358 aa17.58■□□□□ 0.4
HERPUD1-201ENST00000300302 IPO5O00410 1097 aaKnown RBP17.58■□□□□ 0.4
HERPUD1-201ENST00000300302 ITGB5P18084 799 aa17.58■□□□□ 0.4
HERPUD1-201ENST00000300302 EIF2AK2P19525 551 aaKnown RBP17.58■□□□□ 0.4
HERPUD1-201ENST00000300302 STIM1Q13586 685 aa17.58■□□□□ 0.4
HERPUD1-201ENST00000300302 ECM1Q16610 540 aa17.58■□□□□ 0.4
HERPUD1-201ENST00000300302 KLHL10Q6JEL2 608 aa17.58■□□□□ 0.4
HERPUD1-201ENST00000300302 CNNM4Q6P4Q7 775 aa17.58■□□□□ 0.4
HERPUD1-201ENST00000300302 POTEBQ6S5H4 581 aa17.58■□□□□ 0.4
HERPUD1-201ENST00000300302 DRC7Q8IY82 874 aa17.58■□□□□ 0.4
HERPUD1-201ENST00000300302 RIT2Q99578 217 aa17.58■□□□□ 0.4
HERPUD1-201ENST00000300302 BMP2KQ9NSY1 1161 aaPredicted RBP17.58■□□□□ 0.4
HERPUD1-201ENST00000300302 NFE2L3Q9Y4A8 694 aa17.58■□□□□ 0.4
HERPUD1-201ENST00000300302 UBIAD1Q9Y5Z9 338 aa17.58■□□□□ 0.4
HERPUD1-201ENST00000300302 SYNRGQ9UMZ2 1314 aa17.58■□□□□ 0.4
HERPUD1-201ENST00000300302 PVALEFA0A1B0GWK0 134 aa17.57■□□□□ 0.4
HERPUD1-201ENST00000300302 MED24O75448 989 aa17.57■□□□□ 0.4
HERPUD1-201ENST00000300302 ARP10275 920 aa17.57■□□□□ 0.4
HERPUD1-201ENST00000300302 CD44P16070 742 aaKnown RBP17.57■□□□□ 0.4
HERPUD1-201ENST00000300302 FKBP1BP68106 108 aa17.57■□□□□ 0.4
HERPUD1-201ENST00000300302 KCNK18Q7Z418 384 aa17.57■□□□□ 0.4
HERPUD1-201ENST00000300302 CATSPER3Q86XQ3 398 aa17.57■□□□□ 0.4
HERPUD1-201ENST00000300302 SMYD4Q8IYR2 804 aaPredicted RBP17.57■□□□□ 0.4
HERPUD1-201ENST00000300302 IL31RAQ8NI17 732 aa17.57■□□□□ 0.4
HERPUD1-201ENST00000300302 PDCD2LQ9BRP1 358 aa17.57■□□□□ 0.4
HERPUD1-201ENST00000300302 POLR3CQ9BUI4 534 aaPredicted RBP17.57■□□□□ 0.4
HERPUD1-201ENST00000300302 TEKT3Q9BXF9 490 aa17.57■□□□□ 0.4
HERPUD1-201ENST00000300302 JADE2Q9NQC1 790 aa17.57■□□□□ 0.4
HERPUD1-201ENST00000300302 FANCLQ9NW38 375 aa17.57■□□□□ 0.4
HERPUD1-201ENST00000300302 FBXO40Q9UH90 709 aa17.57■□□□□ 0.4
HERPUD1-201ENST00000300302 A0A0G2JMZ2 1700 aa17.57■□□□□ 0.4
HERPUD1-201ENST00000300302 PPP1R2P41236 205 aa17.56■□□□□ 0.4
HERPUD1-201ENST00000300302 PDE4DQ08499 809 aa17.56■□□□□ 0.4
HERPUD1-201ENST00000300302 SNAPC2Q13487 334 aa17.56■□□□□ 0.4
HERPUD1-201ENST00000300302 MTMR1Q13613 665 aa17.56■□□□□ 0.4
HERPUD1-201ENST00000300302 SPATA1Q5VX52 437 aa17.56■□□□□ 0.4
HERPUD1-201ENST00000300302 GIMAP8Q8ND71 665 aaPredicted RBP17.56■□□□□ 0.4
HERPUD1-201ENST00000300302 NSUN6Q8TEA1 469 aaKnown RBP17.56■□□□□ 0.4
HERPUD1-201ENST00000300302 HSD3B7Q9H2F3 369 aa17.56■□□□□ 0.4
HERPUD1-201ENST00000300302 KCNH7Q9NS40 1196 aa17.56■□□□□ 0.4
HERPUD1-201ENST00000300302 CYP39A1Q9NYL5 469 aa17.56■□□□□ 0.4
HERPUD1-201ENST00000300302 DNM3Q9UQ16 869 aa17.56■□□□□ 0.4
HERPUD1-201ENST00000300302 MYMKA6NI61 221 aa17.56■□□□□ 0.4
HERPUD1-201ENST00000300302 TPM3P06753 285 aa17.56■□□□□ 0.4
HERPUD1-201ENST00000300302 MYCLP12524 364 aaPredicted RBP17.56■□□□□ 0.4
HERPUD1-201ENST00000300302 OSBPP22059 807 aa17.56■□□□□ 0.4
HERPUD1-201ENST00000300302 CCND2P30279 289 aa17.56■□□□□ 0.4
HERPUD1-201ENST00000300302 MRPS9P82933 396 aaKnown RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 174.9 ms