RNA–Protein interactions for RNA: ENST00000297689.3

NFIL3-201, Transcript of nuclear factor, interleukin 3 regulated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NFIL3, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIL3-201ENST00000297689 EHBP1Q8NDI1 1231 aa21.96■■□□□ 1.11
NFIL3-201ENST00000297689 CRYGNQ8WXF5 182 aa21.96■■□□□ 1.11
NFIL3-201ENST00000297689 NAP1L4Q99733 375 aaKnown RBP21.96■■□□□ 1.11
NFIL3-201ENST00000297689 KCNMB3Q9NPA1 279 aa21.96■■□□□ 1.11
NFIL3-201ENST00000297689 NYAP2Q9P242 653 aa21.96■■□□□ 1.11
NFIL3-201ENST00000297689 FAM198AQ9UFP1 575 aa21.96■■□□□ 1.11
NFIL3-201ENST00000297689 PCDHA12Q9UN75 941 aa21.96■■□□□ 1.11
NFIL3-201ENST00000297689 SLC26A4O43511 780 aa21.95■■□□□ 1.11
NFIL3-201ENST00000297689 HDLBPQ00341 1268 aaKnown RBP21.95■■□□□ 1.11
NFIL3-201ENST00000297689 SMC1AQ14683 1233 aaKnown RBP21.95■■□□□ 1.11
NFIL3-201ENST00000297689 CCDC84Q86UT8 332 aaPredicted RBP21.95■■□□□ 1.11
NFIL3-201ENST00000297689 SIAH1Q8IUQ4 282 aa21.95■■□□□ 1.11
NFIL3-201ENST00000297689 SLC16A10Q8TF71 515 aa21.95■■□□□ 1.11
NFIL3-201ENST00000297689 GLT8D2Q9H1C3 349 aa21.95■■□□□ 1.11
NFIL3-201ENST00000297689 ARHGAP20Q9P2F6 1191 aa21.95■■□□□ 1.11
NFIL3-201ENST00000297689 PCDHA2Q9Y5H9 948 aa21.95■■□□□ 1.11
NFIL3-201ENST00000297689 USP11P51784 963 aa21.95■■□□□ 1.1
NFIL3-201ENST00000297689 VAV2P52735 878 aa21.95■■□□□ 1.1
NFIL3-201ENST00000297689 CCDC96Q2M329 555 aa21.95■■□□□ 1.1
NFIL3-201ENST00000297689 WDR93Q6P2C0 686 aa21.95■■□□□ 1.1
NFIL3-201ENST00000297689 ZNF771Q7L3S4 317 aaPredicted RBP21.95■■□□□ 1.1
NFIL3-201ENST00000297689 SH3BP5LQ7L8J4 393 aa21.95■■□□□ 1.1
NFIL3-201ENST00000297689 GJA10Q969M2 543 aa21.95■■□□□ 1.1
NFIL3-201ENST00000297689 HDAC6Q9UBN7 1215 aa21.95■■□□□ 1.1
NFIL3-201ENST00000297689 ANO9A1A5B4 782 aa21.94■■□□□ 1.1
NFIL3-201ENST00000297689 IDEP14735 1019 aa21.94■■□□□ 1.1
NFIL3-201ENST00000297689 VSNL1P62760 191 aa21.94■■□□□ 1.1
NFIL3-201ENST00000297689 COASYQ13057 564 aa21.94■■□□□ 1.1
NFIL3-201ENST00000297689 QRICH1Q2TAL8 776 aa21.94■■□□□ 1.1
NFIL3-201ENST00000297689 KIAA1328Q86T90 577 aa21.94■■□□□ 1.1
NFIL3-201ENST00000297689 BAP1Q92560 729 aa21.94■■□□□ 1.1
NFIL3-201ENST00000297689 IDI2Q9BXS1 227 aa21.94■■□□□ 1.1
NFIL3-201ENST00000297689 NT5C3AQ9H0P0 336 aa21.94■■□□□ 1.1
NFIL3-201ENST00000297689 DHX36Q9H2U1 1008 aaKnown RBP21.94■■□□□ 1.1
NFIL3-201ENST00000297689 SAR1BQ9Y6B6 198 aa21.94■■□□□ 1.1
NFIL3-201ENST00000297689 DDTLA6NHG4 134 aaPredicted RBP21.94■■□□□ 1.1
NFIL3-201ENST00000297689 YDJCA8MPS7 323 aa21.94■■□□□ 1.1
NFIL3-201ENST00000297689 ENC1O14682 589 aa21.94■■□□□ 1.1
NFIL3-201ENST00000297689 NPM3O75607 178 aaKnown RBP21.94■■□□□ 1.1
NFIL3-201ENST00000297689 TCP10Q12799 353 aa21.94■■□□□ 1.1
NFIL3-201ENST00000297689 ARHGAP27Q6ZUM4 889 aa21.94■■□□□ 1.1
NFIL3-201ENST00000297689 DCAF4Q8WV16 495 aa21.94■■□□□ 1.1
NFIL3-201ENST00000297689 EDEM3Q9BZQ6 932 aa21.94■■□□□ 1.1
NFIL3-201ENST00000297689 DUSP10Q9Y6W6 482 aa21.94■■□□□ 1.1
NFIL3-201ENST00000297689 KDM3AQ9Y4C1 1321 aa21.93■■□□□ 1.1
NFIL3-201ENST00000297689 PLEKP08567 350 aaPredicted RBP21.93■■□□□ 1.1
NFIL3-201ENST00000297689 EEF2P13639 858 aaKnown RBP21.93■■□□□ 1.1
NFIL3-201ENST00000297689 CYP27A1Q02318 531 aa21.93■■□□□ 1.1
NFIL3-201ENST00000297689 TATDN1Q6P1N9 297 aa21.93■■□□□ 1.1
NFIL3-201ENST00000297689 MOXD1Q6UVY6 613 aa21.93■■□□□ 1.1
NFIL3-201ENST00000297689 PCMTD1Q96MG8 357 aaPredicted RBP21.93■■□□□ 1.1
NFIL3-201ENST00000297689 ABCB6Q9NP58 842 aa21.93■■□□□ 1.1
NFIL3-201ENST00000297689 USP17L15C9J2P7 530 aa21.92■■□□□ 1.1
NFIL3-201ENST00000297689 USP17L13C9JLJ4 530 aa21.92■■□□□ 1.1
NFIL3-201ENST00000297689 USP17L11C9JVI0 530 aa21.92■■□□□ 1.1
NFIL3-201ENST00000297689 USP17L18D6R9N7 530 aa21.92■■□□□ 1.1
NFIL3-201ENST00000297689 USP17L22D6RA61 530 aa21.92■■□□□ 1.1
NFIL3-201ENST00000297689 USP17L17D6RBQ6 530 aa21.92■■□□□ 1.1
NFIL3-201ENST00000297689 USP17L19D6RCP7 530 aa21.92■■□□□ 1.1
NFIL3-201ENST00000297689 USP17L20D6RJB6 530 aa21.92■■□□□ 1.1
NFIL3-201ENST00000297689 MPHOSPH10O00566 681 aaKnown RBP21.92■■□□□ 1.1
NFIL3-201ENST00000297689 MEIS2O14770 477 aa21.92■■□□□ 1.1
NFIL3-201ENST00000297689 C21orf2O43822 256 aa21.92■■□□□ 1.1
NFIL3-201ENST00000297689 CYP2C19P33261 490 aa21.92■■□□□ 1.1
NFIL3-201ENST00000297689 RBM5P52756 815 aaKnown RBP eCLIP21.92■■□□□ 1.16e-7■■□□□ 13.9
NFIL3-201ENST00000297689 USP17L24Q0WX57 530 aa21.92■■□□□ 1.1
NFIL3-201ENST00000297689 LRRC41Q15345 812 aa21.92■■□□□ 1.1
NFIL3-201ENST00000297689 SHROOM1Q2M3G4 852 aaPredicted RBP21.92■■□□□ 1.1
NFIL3-201ENST00000297689 USP17L6PQ6QN14 398 aa21.92■■□□□ 1.1
NFIL3-201ENST00000297689 MYOCDQ8IZQ8 938 aa21.92■■□□□ 1.1
NFIL3-201ENST00000297689 UPF1Q92900 1129 aaKnown RBP eCLIP21.92■■□□□ 1.1
NFIL3-201ENST00000297689 PKNOX2Q96KN3 472 aa21.92■■□□□ 1.1
NFIL3-201ENST00000297689 KANSL2Q9H9L4 492 aa21.92■■□□□ 1.1
NFIL3-201ENST00000297689 FAM196BA6NMK8 535 aa21.92■■□□□ 1.1
NFIL3-201ENST00000297689 RHOXF2BP0C7M4 288 aa21.92■■□□□ 1.1
NFIL3-201ENST00000297689 OAS2P29728 719 aaKnown RBP21.92■■□□□ 1.1
NFIL3-201ENST00000297689 KCNMA1Q12791 1236 aa21.92■■□□□ 1.1
NFIL3-201ENST00000297689 ASTE1Q2TB18 679 aaPredicted RBP21.92■■□□□ 1.1
NFIL3-201ENST00000297689 CCDC42Q96M95 316 aa21.92■■□□□ 1.1
NFIL3-201ENST00000297689 MMS19Q96T76 1030 aa21.92■■□□□ 1.1
NFIL3-201ENST00000297689 P2RX7Q99572 595 aaKnown RBP21.92■■□□□ 1.1
NFIL3-201ENST00000297689 RHOXF2Q9BQY4 288 aa21.92■■□□□ 1.1
NFIL3-201ENST00000297689 SERPINA10Q9UK55 444 aa21.92■■□□□ 1.1
NFIL3-201ENST00000297689 FRMD3A2A2Y4 597 aa21.91■■□□□ 1.1
NFIL3-201ENST00000297689 ERLIN1O75477 346 aa21.91■■□□□ 1.1
NFIL3-201ENST00000297689 MARSP56192 900 aaKnown RBP21.91■■□□□ 1.1
NFIL3-201ENST00000297689 FKBP3Q00688 224 aaKnown RBP21.91■■□□□ 1.1
NFIL3-201ENST00000297689 FAM26FQ5R3K3 315 aa21.91■■□□□ 1.1
NFIL3-201ENST00000297689 KRT26Q7Z3Y9 468 aa21.91■■□□□ 1.1
NFIL3-201ENST00000297689 ZC3H3Q8IXZ2 948 aaKnown RBP21.91■■□□□ 1.1
NFIL3-201ENST00000297689 ZCCHC17Q9NP64 241 aaKnown RBP21.91■■□□□ 1.1
NFIL3-201ENST00000297689 PCDHA1Q9Y5I3 950 aa21.91■■□□□ 1.1
NFIL3-201ENST00000297689 IPO7O95373 1038 aaKnown RBP21.91■■□□□ 1.1
NFIL3-201ENST00000297689 USP14P54578 494 aa21.91■■□□□ 1.1
NFIL3-201ENST00000297689 ATP2B2Q01814 1243 aa21.91■■□□□ 1.1
NFIL3-201ENST00000297689 SPIRE1Q08AE8 756 aa21.91■■□□□ 1.1
NFIL3-201ENST00000297689 CC2D2BQ6DHV5 1058 aa21.91■■□□□ 1.1
NFIL3-201ENST00000297689 HDXQ7Z353 690 aa21.91■■□□□ 1.1
NFIL3-201ENST00000297689 FGFBP2Q9BYJ0 223 aa21.91■■□□□ 1.1
NFIL3-201ENST00000297689 ANO3Q9BYT9 981 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms