RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 ARID4AP29374 1257 aaPredicted RBP16.34■□□□□ 0.21
SPIDR-201ENST00000297423 LETM2Q2VYF4 491 aa16.34■□□□□ 0.21
SPIDR-201ENST00000297423 ZNF512BQ96KM6 892 aaPredicted RBP16.34■□□□□ 0.21
SPIDR-201ENST00000297423 ZNF233A6NK53 670 aa16.34■□□□□ 0.21
SPIDR-201ENST00000297423 A6NNZ2 444 aa16.34■□□□□ 0.21
SPIDR-201ENST00000297423 SERPINB2P05120 415 aa16.34■□□□□ 0.21
SPIDR-201ENST00000297423 SLC1A4P43007 532 aa16.34■□□□□ 0.21
SPIDR-201ENST00000297423 TUBB8Q3ZCM7 444 aa16.34■□□□□ 0.21
SPIDR-201ENST00000297423 FAM114A1Q8IWE2 563 aa16.34■□□□□ 0.21
SPIDR-201ENST00000297423 ZBTB10Q96DT7 871 aa16.34■□□□□ 0.21
SPIDR-201ENST00000297423 RNF41Q9H4P4 317 aaPredicted RBP16.34■□□□□ 0.21
SPIDR-201ENST00000297423 MYH14Q7Z406 1995 aaKnown RBP16.34■□□□□ 0.21
SPIDR-201ENST00000297423 CHRM1P11229 460 aaPredicted RBP16.33■□□□□ 0.21
SPIDR-201ENST00000297423 FCER1AP12319 257 aa16.33■□□□□ 0.21
SPIDR-201ENST00000297423 FGFR2P21802 821 aa16.33■□□□□ 0.21
SPIDR-201ENST00000297423 PBX1P40424 430 aa16.33■□□□□ 0.21
SPIDR-201ENST00000297423 SMTNP53814 917 aa16.33■□□□□ 0.21
SPIDR-201ENST00000297423 INF2Q27J81 1249 aa16.33■□□□□ 0.21
SPIDR-201ENST00000297423 SOGA3Q5TF21 947 aa16.33■□□□□ 0.21
SPIDR-201ENST00000297423 TCERG1LQ5VWI1 586 aa16.33■□□□□ 0.21
SPIDR-201ENST00000297423 LCORLQ8N3X6 602 aa16.33■□□□□ 0.21
SPIDR-201ENST00000297423 ZNF579Q8NAF0 562 aaKnown RBP16.33■□□□□ 0.21
SPIDR-201ENST00000297423 NSMCE1Q8WV22 266 aa16.33■□□□□ 0.21
SPIDR-201ENST00000297423 STAMBPL1Q96FJ0 436 aa16.33■□□□□ 0.21
SPIDR-201ENST00000297423 PAIP2Q9BPZ3 127 aaKnown RBP16.33■□□□□ 0.21
SPIDR-201ENST00000297423 SAMD15Q9P1V8 674 aa16.33■□□□□ 0.21
SPIDR-201ENST00000297423 RTL9Q8NET4 1388 aa16.33■□□□□ 0.2
SPIDR-201ENST00000297423 LRRC53A6NM62 1247 aa16.33■□□□□ 0.2
SPIDR-201ENST00000297423 ACCSLQ4AC99 568 aa16.33■□□□□ 0.2
SPIDR-201ENST00000297423 DDX47Q9H0S4 455 aaKnown RBP16.33■□□□□ 0.2
SPIDR-201ENST00000297423 BMP15O95972 392 aa16.33■□□□□ 0.2
SPIDR-201ENST00000297423 UBE3CQ15386 1083 aa16.33■□□□□ 0.2
SPIDR-201ENST00000297423 AP1ARQ63HQ0 302 aa16.33■□□□□ 0.2
SPIDR-201ENST00000297423 SEC16BQ96JE7 1060 aa16.33■□□□□ 0.2
SPIDR-201ENST00000297423 STRBPQ96SI9 672 aaKnown RBP16.33■□□□□ 0.2
SPIDR-201ENST00000297423 NUP58Q9BVL2 599 aa16.33■□□□□ 0.2
SPIDR-201ENST00000297423 GOLGA6L10A0A0M3HER8 536 aa16.32■□□□□ 0.2
SPIDR-201ENST00000297423 SEMA3EO15041 775 aa16.32■□□□□ 0.2
SPIDR-201ENST00000297423 SHOX2O60902 331 aaPredicted RBP16.32■□□□□ 0.2
SPIDR-201ENST00000297423 SLC8A1P32418 973 aa16.32■□□□□ 0.2
SPIDR-201ENST00000297423 DAAM2Q86T65 1068 aa16.32■□□□□ 0.2
SPIDR-201ENST00000297423 TMTC2Q8N394 836 aa16.32■□□□□ 0.2
SPIDR-201ENST00000297423 ITIH6Q6UXX5 1313 aa16.32■□□□□ 0.2
SPIDR-201ENST00000297423 NT5DC1Q5TFE4 455 aa16.32■□□□□ 0.2
SPIDR-201ENST00000297423 NELFCDQ8IXH7 590 aa16.32■□□□□ 0.2
SPIDR-201ENST00000297423 ADAMTS1Q9UHI8 967 aa16.32■□□□□ 0.2
SPIDR-201ENST00000297423 ANO9A1A5B4 782 aa16.32■□□□□ 0.2
SPIDR-201ENST00000297423 FAM107AO95990 144 aa16.32■□□□□ 0.2
SPIDR-201ENST00000297423 TBC1D5Q92609 795 aa16.32■□□□□ 0.2
SPIDR-201ENST00000297423 SGSM3Q96HU1 749 aa16.32■□□□□ 0.2
SPIDR-201ENST00000297423 SPATS2LQ9NUQ6 558 aaKnown RBP16.32■□□□□ 0.2
SPIDR-201ENST00000297423 TSPY2A6NKD2 308 aa16.31■□□□□ 0.2
SPIDR-201ENST00000297423 TRAF5O00463 557 aa16.31■□□□□ 0.2
SPIDR-201ENST00000297423 DIAPH2O60879 1101 aa16.31■□□□□ 0.2
SPIDR-201ENST00000297423 HIBADHP31937 336 aaKnown RBP16.31■□□□□ 0.2
SPIDR-201ENST00000297423 MMP14P50281 582 aa16.31■□□□□ 0.2
SPIDR-201ENST00000297423 POLR2FP61218 127 aaKnown RBP16.31■□□□□ 0.2
SPIDR-201ENST00000297423 DHX9Q08211 1270 aaKnown RBP16.31■□□□□ 0.2
SPIDR-201ENST00000297423 ZKSCAN8Q15776 578 aaPredicted RBP16.31■□□□□ 0.2
SPIDR-201ENST00000297423 QPCTQ16769 361 aa16.31■□□□□ 0.2
SPIDR-201ENST00000297423 FUKQ8N0W3 1084 aa16.31■□□□□ 0.2
SPIDR-201ENST00000297423 KIF2BQ8N4N8 673 aa16.31■□□□□ 0.2
SPIDR-201ENST00000297423 CASKIN2Q8WXE0 1202 aa16.31■□□□□ 0.2
SPIDR-201ENST00000297423 SPAG5Q96R06 1193 aa16.31■□□□□ 0.2
SPIDR-201ENST00000297423 UBA5Q9GZZ9 404 aa16.31■□□□□ 0.2
SPIDR-201ENST00000297423 NMT2O60551 498 aa16.31■□□□□ 0.2
SPIDR-201ENST00000297423 FSBPO95073 299 aa16.31■□□□□ 0.2
SPIDR-201ENST00000297423 KRT18P05783 430 aaKnown RBP16.31■□□□□ 0.2
SPIDR-201ENST00000297423 KRT13P13646 458 aa16.31■□□□□ 0.2
SPIDR-201ENST00000297423 RPS6KA1Q15418 735 aa16.31■□□□□ 0.2
SPIDR-201ENST00000297423 GNPTABQ3T906 1256 aa16.31■□□□□ 0.2
SPIDR-201ENST00000297423 RUFY4Q6ZNE9 571 aa16.31■□□□□ 0.2
SPIDR-201ENST00000297423 CCDC50Q8IVM0 306 aa16.31■□□□□ 0.2
SPIDR-201ENST00000297423 KCNK9Q9NPC2 374 aa16.31■□□□□ 0.2
SPIDR-201ENST00000297423 SH3GL2Q99962 352 aa16.31■□□□□ 0.2
SPIDR-201ENST00000297423 LIFRP42702 1097 aa16.3■□□□□ 0.2
SPIDR-201ENST00000297423 MKRN4PQ13434 485 aaPredicted RBP16.3■□□□□ 0.2
SPIDR-201ENST00000297423 ANKRD40Q6AI12 368 aa16.3■□□□□ 0.2
SPIDR-201ENST00000297423 AMIGO3Q86WK7 504 aa16.3■□□□□ 0.2
SPIDR-201ENST00000297423 ANKRD42Q8N9B4 389 aa16.3■□□□□ 0.2
SPIDR-201ENST00000297423 RBM17Q96I25 401 aaKnown RBP16.3■□□□□ 0.2
SPIDR-201ENST00000297423 PPP1R12CQ9BZL4 782 aa16.3■□□□□ 0.2
SPIDR-201ENST00000297423 MYH8P13535 1937 aa16.3■□□□□ 0.2
SPIDR-201ENST00000297423 RAD51CO43502 376 aa16.3■□□□□ 0.2
SPIDR-201ENST00000297423 EEF1GP26641 437 aaKnown RBP16.3■□□□□ 0.2
SPIDR-201ENST00000297423 FBXL5Q9UKA1 691 aa16.3■□□□□ 0.2
SPIDR-201ENST00000297423 HMGB1P1B2RPK0 211 aaPredicted RBP16.3■□□□□ 0.2
SPIDR-201ENST00000297423 KRIT1O00522 736 aa16.3■□□□□ 0.2
SPIDR-201ENST00000297423 SCTRP47872 440 aa16.3■□□□□ 0.2
SPIDR-201ENST00000297423 NBPF9Q3BBW0 867 aa16.3■□□□□ 0.2
SPIDR-201ENST00000297423 PREPLQ4J6C6 727 aaPredicted RBP16.3■□□□□ 0.2
SPIDR-201ENST00000297423 MMGT1Q8N4V1 131 aa16.3■□□□□ 0.2
SPIDR-201ENST00000297423 MSL3Q8N5Y2 521 aaKnown RBP16.3■□□□□ 0.2
SPIDR-201ENST00000297423 CCDC197Q8NCU1 140 aa16.3■□□□□ 0.2
SPIDR-201ENST00000297423 LRRC45Q96CN5 670 aa16.3■□□□□ 0.2
SPIDR-201ENST00000297423 BICDL2A1A5D9 508 aa16.29■□□□□ 0.2
SPIDR-201ENST00000297423 G3V3G9 751 aa16.29■□□□□ 0.2
SPIDR-201ENST00000297423 PCK1P35558 622 aa16.29■□□□□ 0.2
SPIDR-201ENST00000297423 DCAF8Q5TAQ9 597 aa16.29■□□□□ 0.2
SPIDR-201ENST00000297423 ACTR5Q9H9F9 607 aaPredicted RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms