RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 ANKRD65E5RJM6 399 aa21.15■□□□□ 0.98
TRA2A-201ENST00000297071 CCNT1O60563 726 aaKnown RBP21.15■□□□□ 0.98
TRA2A-201ENST00000297071 LSP1P33241 339 aa21.15■□□□□ 0.98
TRA2A-201ENST00000297071 LIG3P49916 1009 aa21.15■□□□□ 0.98
TRA2A-201ENST00000297071 PPP4CP60510 307 aa21.15■□□□□ 0.98
TRA2A-201ENST00000297071 TNNC1P63316 161 aa21.15■□□□□ 0.98
TRA2A-201ENST00000297071 PIK3R5Q8WYR1 880 aa21.15■□□□□ 0.98
TRA2A-201ENST00000297071 LARP4BQ92615 738 aaKnown RBP21.15■□□□□ 0.98
TRA2A-201ENST00000297071 ZBTB9Q96C00 473 aa21.15■□□□□ 0.98
TRA2A-201ENST00000297071 ATP6V1G3Q96LB4 118 aa21.15■□□□□ 0.98
TRA2A-201ENST00000297071 PLCB1Q9NQ66 1216 aa21.15■□□□□ 0.98
TRA2A-201ENST00000297071 NHSQ6T4R5 1651 aa21.14■□□□□ 0.98
TRA2A-201ENST00000297071 ZNF233A6NK53 670 aa21.14■□□□□ 0.97
TRA2A-201ENST00000297071 PPP1R37O75864 691 aa21.14■□□□□ 0.97
TRA2A-201ENST00000297071 HEXIM1O94992 359 aaKnown RBP21.14■□□□□ 0.97
TRA2A-201ENST00000297071 NAP1L1P55209 391 aaKnown RBP21.14■□□□□ 0.97
TRA2A-201ENST00000297071 EVX2Q03828 476 aa21.14■□□□□ 0.97
TRA2A-201ENST00000297071 KCNMA1Q12791 1236 aa21.14■□□□□ 0.97
TRA2A-201ENST00000297071 TMEM266Q2M3C6 531 aa21.14■□□□□ 0.97
TRA2A-201ENST00000297071 ZCWPW2Q504Y3 356 aa21.14■□□□□ 0.97
TRA2A-201ENST00000297071 SFMBT2Q5VUG0 894 aa21.14■□□□□ 0.97
TRA2A-201ENST00000297071 CCDC43Q96MW1 224 aaKnown RBP21.14■□□□□ 0.97
TRA2A-201ENST00000297071 PNMA5Q96PV4 448 aa21.14■□□□□ 0.97
TRA2A-201ENST00000297071 SLC39A2Q9NP94 309 aa21.14■□□□□ 0.97
TRA2A-201ENST00000297071 ATP6V0A2Q9Y487 856 aa21.14■□□□□ 0.97
TRA2A-201ENST00000297071 GLI1P08151 1106 aa21.13■□□□□ 0.97
TRA2A-201ENST00000297071 NR1D1P20393 614 aa21.13■□□□□ 0.97
TRA2A-201ENST00000297071 ANXA13P27216 316 aa21.13■□□□□ 0.97
TRA2A-201ENST00000297071 NAPAP54920 295 aa21.13■□□□□ 0.97
TRA2A-201ENST00000297071 GSCP56915 257 aaPredicted RBP21.13■□□□□ 0.97
TRA2A-201ENST00000297071 FKBP3Q00688 224 aaKnown RBP21.13■□□□□ 0.97
TRA2A-201ENST00000297071 RASSF7Q02833 373 aa21.13■□□□□ 0.97
TRA2A-201ENST00000297071 SLC18A3Q16572 532 aa21.13■□□□□ 0.97
TRA2A-201ENST00000297071 PTGISQ16647 500 aa21.13■□□□□ 0.97
TRA2A-201ENST00000297071 LETM2Q2VYF4 491 aa21.13■□□□□ 0.97
TRA2A-201ENST00000297071 TMEM119Q4V9L6 283 aa21.13■□□□□ 0.97
TRA2A-201ENST00000297071 OTUD6BQ8N6M0 293 aa21.13■□□□□ 0.97
TRA2A-201ENST00000297071 RAD54LQ92698 747 aa21.13■□□□□ 0.97
TRA2A-201ENST00000297071 TMEM47Q9BQJ4 181 aa21.13■□□□□ 0.97
TRA2A-201ENST00000297071 EHD4Q9H223 541 aa21.13■□□□□ 0.97
TRA2A-201ENST00000297071 AIPL1Q9NZN9 384 aa21.13■□□□□ 0.97
TRA2A-201ENST00000297071 FOCADQ5VW36 1801 aa21.13■□□□□ 0.97
TRA2A-201ENST00000297071 SMCO2A6NFE2 343 aa21.13■□□□□ 0.97
TRA2A-201ENST00000297071 MDH1P40925 334 aaKnown RBP21.13■□□□□ 0.97
TRA2A-201ENST00000297071 TECP42680 631 aa21.13■□□□□ 0.97
TRA2A-201ENST00000297071 SLC1A4P43007 532 aa21.13■□□□□ 0.97
TRA2A-201ENST00000297071 NOVP48745 357 aa21.13■□□□□ 0.97
TRA2A-201ENST00000297071 CARSP49589 748 aaKnown RBP21.13■□□□□ 0.97
TRA2A-201ENST00000297071 PDCLQ13371 301 aa21.13■□□□□ 0.97
TRA2A-201ENST00000297071 CUL1Q13616 776 aa21.13■□□□□ 0.97
TRA2A-201ENST00000297071 ZC3H3Q8IXZ2 948 aaKnown RBP21.13■□□□□ 0.97
TRA2A-201ENST00000297071 PBKQ96KB5 322 aa21.13■□□□□ 0.97
TRA2A-201ENST00000297071 CALR3Q96L12 384 aaKnown RBP21.13■□□□□ 0.97
TRA2A-201ENST00000297071 DRC1Q96MC2 740 aa21.13■□□□□ 0.97
TRA2A-201ENST00000297071 ISCUQ9H1K1 167 aa21.13■□□□□ 0.97
TRA2A-201ENST00000297071 EPB41L5Q9HCM4 733 aa21.13■□□□□ 0.97
TRA2A-201ENST00000297071 BTG4Q9NY30 223 aa21.13■□□□□ 0.97
TRA2A-201ENST00000297071 COL4A3BPQ9Y5P4 624 aa21.13■□□□□ 0.97
TRA2A-201ENST00000297071 KLRF2D3W0D1 207 aa21.12■□□□□ 0.97
TRA2A-201ENST00000297071 USP17L8P0C7I0 530 aa21.12■□□□□ 0.97
TRA2A-201ENST00000297071 TSPY3P0CV98 308 aa21.12■□□□□ 0.97
TRA2A-201ENST00000297071 TSPY8P0CW00 308 aa21.12■□□□□ 0.97
TRA2A-201ENST00000297071 SOGA3Q5TF21 947 aa21.12■□□□□ 0.97
TRA2A-201ENST00000297071 ZNF444Q8N0Y2 327 aaPredicted RBP21.12■□□□□ 0.97
TRA2A-201ENST00000297071 CABS1Q96KC9 395 aa21.12■□□□□ 0.97
TRA2A-201ENST00000297071 MYCBPQ99417 103 aaPredicted RBP21.12■□□□□ 0.97
TRA2A-201ENST00000297071 MKNK2Q9HBH9 465 aa21.12■□□□□ 0.97
TRA2A-201ENST00000297071 NCK2O43639 380 aa21.11■□□□□ 0.97
TRA2A-201ENST00000297071 MATR3P43243 847 aaKnown RBP eCLIP21.11■□□□□ 0.97
TRA2A-201ENST00000297071 GSTO1P78417 241 aa21.11■□□□□ 0.97
TRA2A-201ENST00000297071 GFPT1Q06210 699 aaPredicted RBP21.11■□□□□ 0.97
TRA2A-201ENST00000297071 IFI16Q16666 785 aaKnown RBP21.11■□□□□ 0.97
TRA2A-201ENST00000297071 NAA35Q5VZE5 725 aa21.11■□□□□ 0.97
TRA2A-201ENST00000297071 RNPC3Q96LT9 517 aaKnown RBP21.11■□□□□ 0.97
TRA2A-201ENST00000297071 TMBIM4Q9HC24 238 aa21.11■□□□□ 0.97
TRA2A-201ENST00000297071 NFU1Q9UMS0 254 aa21.11■□□□□ 0.97
TRA2A-201ENST00000297071 IRS2Q9Y4H2 1338 aa21.11■□□□□ 0.97
TRA2A-201ENST00000297071 NKRFO15226 690 aaKnown RBP eCLIP21.11■□□□□ 0.971e-12■■□□□ 11.7
TRA2A-201ENST00000297071 NOL4O94818 638 aa21.11■□□□□ 0.97
TRA2A-201ENST00000297071 FAM107AO95990 144 aa21.11■□□□□ 0.97
TRA2A-201ENST00000297071 CXCR5P32302 372 aa21.11■□□□□ 0.97
TRA2A-201ENST00000297071 ATP6V1AP38606 617 aa21.11■□□□□ 0.97
TRA2A-201ENST00000297071 KCNV1Q6PIU1 500 aa21.11■□□□□ 0.97
TRA2A-201ENST00000297071 MYOCDQ8IZQ8 938 aa21.11■□□□□ 0.97
TRA2A-201ENST00000297071 USP38Q8NB14 1042 aa21.11■□□□□ 0.97
TRA2A-201ENST00000297071 ZNF473Q8WTR7 871 aaKnown RBP21.11■□□□□ 0.97
TRA2A-201ENST00000297071 CASKIN2Q8WXE0 1202 aa21.11■□□□□ 0.97
TRA2A-201ENST00000297071 LRRC45Q96CN5 670 aa21.11■□□□□ 0.97
TRA2A-201ENST00000297071 TAF1DQ9H5J8 278 aaPredicted RBP21.11■□□□□ 0.97
TRA2A-201ENST00000297071 LOC102724428A0A0B4J2F2 783 aa21.1■□□□□ 0.97
TRA2A-201ENST00000297071 PALMO75781 387 aa21.1■□□□□ 0.97
TRA2A-201ENST00000297071 PRDX5P30044 214 aa21.1■□□□□ 0.97
TRA2A-201ENST00000297071 SIK1P57059 783 aa21.1■□□□□ 0.97
TRA2A-201ENST00000297071 SETQ01105 290 aaPredicted RBP21.1■□□□□ 0.97
TRA2A-201ENST00000297071 GUCY2DQ02846 1103 aa21.1■□□□□ 0.97
TRA2A-201ENST00000297071 ITGB3BPQ13352 177 aaPredicted RBP21.1■□□□□ 0.97
TRA2A-201ENST00000297071 BIRC3Q13489 604 aa21.1■□□□□ 0.97
TRA2A-201ENST00000297071 ERFEQ4G0M1 354 aa21.1■□□□□ 0.97
TRA2A-201ENST00000297071 HYIQ5T013 277 aa21.1■□□□□ 0.97
TRA2A-201ENST00000297071 FAM83BQ5T0W9 1011 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms