RNA–Protein interactions for RNA: ENST00000296273.6

RFC4-201, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC4, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-201ENST00000296273 DHX38Q92620 1227 aaKnown RBP12.29□□□□□ -0.44
RFC4-201ENST00000296273 UBA5Q9GZZ9 404 aa12.29□□□□□ -0.44
RFC4-201ENST00000296273 MAP3K20Q9NYL2 800 aaKnown RBP12.29□□□□□ -0.44
RFC4-201ENST00000296273 CTNNA3Q9UI47 895 aa12.29□□□□□ -0.44
RFC4-201ENST00000296273 INSL6Q9Y581 213 aa12.29□□□□□ -0.44
RFC4-201ENST00000296273 MRVI1Q9Y6F6 885 aa12.29□□□□□ -0.44
RFC4-201ENST00000296273 PTPRSQ13332 1948 aa12.28□□□□□ -0.44
RFC4-201ENST00000296273 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.28□□□□□ -0.44
RFC4-201ENST00000296273 LINC01553A4QN01 128 aa12.28□□□□□ -0.44
RFC4-201ENST00000296273 HAS3O00219 553 aa12.28□□□□□ -0.44
RFC4-201ENST00000296273 ZNF213O14771 459 aa12.28□□□□□ -0.44
RFC4-201ENST00000296273 GOLGA8HP0CJ92 632 aa12.28□□□□□ -0.44
RFC4-201ENST00000296273 GSPT1P15170 499 aaKnown RBP12.28□□□□□ -0.44
RFC4-201ENST00000296273 MFSD10Q14728 455 aa12.28□□□□□ -0.44
RFC4-201ENST00000296273 KIAA0753Q2KHM9 967 aa12.28□□□□□ -0.44
RFC4-201ENST00000296273 SPRED2Q7Z698 418 aa12.28□□□□□ -0.44
RFC4-201ENST00000296273 ZNF589Q86UQ0 364 aaPredicted RBP12.28□□□□□ -0.44
RFC4-201ENST00000296273 ADGRF4Q8IZF3 695 aa12.28□□□□□ -0.44
RFC4-201ENST00000296273 TBC1D5Q92609 795 aa12.28□□□□□ -0.44
RFC4-201ENST00000296273 ANKS1AQ92625 1134 aa12.28□□□□□ -0.44
RFC4-201ENST00000296273 ALG1Q9BT22 464 aa12.28□□□□□ -0.44
RFC4-201ENST00000296273 UBE2ZQ9H832 354 aaPredicted RBP12.28□□□□□ -0.44
RFC4-201ENST00000296273 KAT14Q9H8E8 782 aa12.28□□□□□ -0.44
RFC4-201ENST00000296273 COL20A1Q9P218 1284 aa12.28□□□□□ -0.44
RFC4-201ENST00000296273 PPFIA4O75335 1185 aa12.27□□□□□ -0.45
RFC4-201ENST00000296273 LGR5O75473 907 aa12.27□□□□□ -0.45
RFC4-201ENST00000296273 NR3C2P08235 984 aa12.27□□□□□ -0.45
RFC4-201ENST00000296273 HOXD8P13378 290 aaPredicted RBP12.27□□□□□ -0.45
RFC4-201ENST00000296273 SDSP20132 328 aa12.27□□□□□ -0.45
RFC4-201ENST00000296273 NMIQ13287 307 aaPredicted RBP12.27□□□□□ -0.45
RFC4-201ENST00000296273 PUS10Q3MIT2 529 aaKnown RBP12.27□□□□□ -0.45
RFC4-201ENST00000296273 LEXMQ3ZCV2 418 aa12.27□□□□□ -0.45
RFC4-201ENST00000296273 TMCO2Q7Z6W1 182 aaPredicted RBP12.27□□□□□ -0.45
RFC4-201ENST00000296273 FBXO11Q86XK2 927 aa12.27□□□□□ -0.45
RFC4-201ENST00000296273 TBC1D10CQ8IV04 446 aa12.27□□□□□ -0.45
RFC4-201ENST00000296273 HSCBQ8IWL3 235 aa12.27□□□□□ -0.45
RFC4-201ENST00000296273 DHX37Q8IY37 1157 aaKnown RBP12.27□□□□□ -0.45
RFC4-201ENST00000296273 SAMD3Q8N6K7 520 aa12.27□□□□□ -0.45
RFC4-201ENST00000296273 TET1Q8NFU7 2136 aa12.27□□□□□ -0.45
RFC4-201ENST00000296273 SAMD11Q96NU1 681 aa12.27□□□□□ -0.45
RFC4-201ENST00000296273 ZKSCAN3Q9BRR0 538 aa12.27□□□□□ -0.45
RFC4-201ENST00000296273 CPVLQ9H3G5 476 aa12.27□□□□□ -0.45
RFC4-201ENST00000296273 PXMP2Q9NR77 195 aa12.27□□□□□ -0.45
RFC4-201ENST00000296273 MTUS1Q9ULD2 1270 aa12.27□□□□□ -0.45
RFC4-201ENST00000296273 NEDD4P46934 1319 aa12.26□□□□□ -0.45
RFC4-201ENST00000296273 TRIP12Q14669 1992 aaPredicted RBP12.26□□□□□ -0.45
RFC4-201ENST00000296273 BDP1A6H8Y1 2624 aa12.26□□□□□ -0.45
RFC4-201ENST00000296273 PRR33A8MZF0 331 aa12.26□□□□□ -0.45
RFC4-201ENST00000296273 TRIM6-TRIM34B2RNG4 842 aa12.26□□□□□ -0.45
RFC4-201ENST00000296273 DHX16O60231 1041 aaKnown RBP12.26□□□□□ -0.45
RFC4-201ENST00000296273 CFBP00751 764 aa12.26□□□□□ -0.45
RFC4-201ENST00000296273 AMHP03971 560 aa12.26□□□□□ -0.45
RFC4-201ENST00000296273 PARP1P09874 1014 aaKnown RBP12.26□□□□□ -0.45
RFC4-201ENST00000296273 TGFB3P10600 412 aa12.26□□□□□ -0.45
RFC4-201ENST00000296273 EIF2AK2P19525 551 aaKnown RBP12.26□□□□□ -0.45
RFC4-201ENST00000296273 GHRHRQ02643 423 aa12.26□□□□□ -0.45
RFC4-201ENST00000296273 PTPROQ16827 1216 aa12.26□□□□□ -0.45
RFC4-201ENST00000296273 TRIM71Q2Q1W2 868 aaKnown RBP12.26□□□□□ -0.45
RFC4-201ENST00000296273 QRICH1Q2TAL8 776 aa12.26□□□□□ -0.45
RFC4-201ENST00000296273 ZNF618Q5T7W0 954 aa12.26□□□□□ -0.45
RFC4-201ENST00000296273 FAM178BQ8IXR5 827 aa12.26□□□□□ -0.45
RFC4-201ENST00000296273 FBXO22Q8NEZ5 403 aa12.26□□□□□ -0.45
RFC4-201ENST00000296273 C11orf16Q9NQ32 467 aa12.26□□□□□ -0.45
RFC4-201ENST00000296273 KIAA1217Q5T5P2 1943 aa12.25□□□□□ -0.45
RFC4-201ENST00000296273 NCOR1O75376 2440 aa12.25□□□□□ -0.45
RFC4-201ENST00000296273 SIP14410 1827 aa12.25□□□□□ -0.45
RFC4-201ENST00000296273 KDM4AO75164 1064 aa12.25□□□□□ -0.45
RFC4-201ENST00000296273 ZNF286BP0CG31 522 aa12.25□□□□□ -0.45
RFC4-201ENST00000296273 HSD17B4P51659 736 aa12.25□□□□□ -0.45
RFC4-201ENST00000296273 HTRA4P83105 476 aaPredicted RBP12.25□□□□□ -0.45
RFC4-201ENST00000296273 MYSM1Q5VVJ2 828 aa12.25□□□□□ -0.45
RFC4-201ENST00000296273 TRAF7Q6Q0C0 670 aa12.25□□□□□ -0.45
RFC4-201ENST00000296273 GJD3Q8N144 294 aa12.25□□□□□ -0.45
RFC4-201ENST00000296273 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.25□□□□□ -0.45
RFC4-201ENST00000296273 KHSRPQ92945 711 aaKnown RBP eCLIP12.25□□□□□ -0.453e-6■■□□□ 13.8
RFC4-201ENST00000296273 ZSCAN10Q96SZ4 725 aaPredicted RBP12.25□□□□□ -0.45
RFC4-201ENST00000296273 AMNQ9BXJ7 453 aa12.25□□□□□ -0.45
RFC4-201ENST00000296273 JMJD4Q9H9V9 463 aa12.25□□□□□ -0.45
RFC4-201ENST00000296273 RSPH10B2B2RC85 870 aa12.24□□□□□ -0.45
RFC4-201ENST00000296273 CAND2O75155 1236 aa12.24□□□□□ -0.45
RFC4-201ENST00000296273 RSPH10BP0C881 870 aa12.24□□□□□ -0.45
RFC4-201ENST00000296273 ALADP13716 330 aa12.24□□□□□ -0.45
RFC4-201ENST00000296273 KCNA5P22460 613 aa12.24□□□□□ -0.45
RFC4-201ENST00000296273 TRAF1Q13077 416 aa12.24□□□□□ -0.45
RFC4-201ENST00000296273 MBTPS1Q14703 1052 aa12.24□□□□□ -0.45
RFC4-201ENST00000296273 RABEP1Q15276 862 aa12.24□□□□□ -0.45
RFC4-201ENST00000296273 TCTN1Q2MV58 587 aa12.24□□□□□ -0.45
RFC4-201ENST00000296273 TIGD5Q53EQ6 642 aa12.24□□□□□ -0.45
RFC4-201ENST00000296273 PLEKHG4Q58EX7 1191 aa12.24□□□□□ -0.45
RFC4-201ENST00000296273 CELF3Q5SZQ8 465 aaKnown RBP12.24□□□□□ -0.45
RFC4-201ENST00000296273 FAM117BQ6P1L5 589 aa12.24□□□□□ -0.45
RFC4-201ENST00000296273 STOX1Q6ZVD7 989 aa12.24□□□□□ -0.45
RFC4-201ENST00000296273 SERINC5Q86VE9 423 aa12.24□□□□□ -0.45
RFC4-201ENST00000296273 MYOCDQ8IZQ8 938 aa12.24□□□□□ -0.45
RFC4-201ENST00000296273 DBF4BQ8NFT6 615 aa12.24□□□□□ -0.45
RFC4-201ENST00000296273 SP7Q8TDD2 431 aaPredicted RBP12.24□□□□□ -0.45
RFC4-201ENST00000296273 RILPL2Q969X0 211 aa12.24□□□□□ -0.45
RFC4-201ENST00000296273 MRPL38Q96DV4 380 aaKnown RBP12.24□□□□□ -0.45
RFC4-201ENST00000296273 SPATA33Q96N06 139 aa12.24□□□□□ -0.45
RFC4-201ENST00000296273 PDCD2LQ9BRP1 358 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms