RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 ANKZF1Q9H8Y5 726 aa17.55■□□□□ 0.4
NCKIPSD-201ENST00000294129 SUGCTQ9HAC7 445 aa17.55■□□□□ 0.4
NCKIPSD-201ENST00000294129 ZCCHC17Q9NP64 241 aaKnown RBP17.55■□□□□ 0.4
NCKIPSD-201ENST00000294129 NLRC4Q9NPP4 1024 aa17.55■□□□□ 0.4
NCKIPSD-201ENST00000294129 H0YIN7 160 aa17.55■□□□□ 0.4
NCKIPSD-201ENST00000294129 JAG1P78504 1218 aa17.55■□□□□ 0.4
NCKIPSD-201ENST00000294129 ABCB5Q2M3G0 1257 aa17.55■□□□□ 0.4
NCKIPSD-201ENST00000294129 HERC4Q5GLZ8 1057 aaPredicted RBP17.55■□□□□ 0.4
NCKIPSD-201ENST00000294129 FAM26FQ5R3K3 315 aa17.55■□□□□ 0.4
NCKIPSD-201ENST00000294129 DACT2Q5SW24 774 aa17.55■□□□□ 0.4
NCKIPSD-201ENST00000294129 GUF1Q8N442 669 aaKnown RBP17.55■□□□□ 0.4
NCKIPSD-201ENST00000294129 ZFP91Q96JP5 570 aaPredicted RBP17.55■□□□□ 0.4
NCKIPSD-201ENST00000294129 BMP2KQ9NSY1 1161 aaPredicted RBP17.55■□□□□ 0.4
NCKIPSD-201ENST00000294129 SMCHD1A6NHR9 2005 aa17.54■□□□□ 0.4
NCKIPSD-201ENST00000294129 KRT83P78385 493 aa17.54■□□□□ 0.4
NCKIPSD-201ENST00000294129 CYP4A11Q02928 519 aa17.54■□□□□ 0.4
NCKIPSD-201ENST00000294129 TSG101Q99816 390 aa17.54■□□□□ 0.4
NCKIPSD-201ENST00000294129 HINFPQ9BQA5 517 aa17.54■□□□□ 0.4
NCKIPSD-201ENST00000294129 HAUS4Q9H6D7 363 aa17.54■□□□□ 0.4
NCKIPSD-201ENST00000294129 SCN9AQ15858 1988 aa17.54■□□□□ 0.4
NCKIPSD-201ENST00000294129 PLA2G4BP0C869 781 aa17.54■□□□□ 0.4
NCKIPSD-201ENST00000294129 APBA1Q02410 837 aa17.54■□□□□ 0.4
NCKIPSD-201ENST00000294129 SIAH1Q8IUQ4 282 aa17.54■□□□□ 0.4
NCKIPSD-201ENST00000294129 AKT1S1Q96B36 256 aa17.54■□□□□ 0.4
NCKIPSD-201ENST00000294129 DNAJC19Q96DA6 116 aa17.54■□□□□ 0.4
NCKIPSD-201ENST00000294129 FAM53CQ9NYF3 392 aa17.54■□□□□ 0.4
NCKIPSD-201ENST00000294129 CLRN2A0PK11 232 aa17.53■□□□□ 0.4
NCKIPSD-201ENST00000294129 ERICH4A6NGS2 130 aa17.53■□□□□ 0.4
NCKIPSD-201ENST00000294129 NDUFB10O96000 172 aa17.53■□□□□ 0.4
NCKIPSD-201ENST00000294129 PPP1R2P41236 205 aa17.53■□□□□ 0.4
NCKIPSD-201ENST00000294129 MAN2A1Q16706 1144 aa17.53■□□□□ 0.4
NCKIPSD-201ENST00000294129 LONRF2Q1L5Z9 754 aa17.53■□□□□ 0.4
NCKIPSD-201ENST00000294129 ANKRD13CQ8N6S4 541 aa17.53■□□□□ 0.4
NCKIPSD-201ENST00000294129 TCP10L2B9ZVM9 353 aa17.53■□□□□ 0.4
NCKIPSD-201ENST00000294129 KRT86O43790 486 aa17.53■□□□□ 0.4
NCKIPSD-201ENST00000294129 MED24O75448 989 aa17.53■□□□□ 0.4
NCKIPSD-201ENST00000294129 PABPC4Q13310 644 aaKnown RBP eCLIP17.53■□□□□ 0.44e-10■■■■□ 23.7
NCKIPSD-201ENST00000294129 SPA17Q15506 151 aa17.53■□□□□ 0.4
NCKIPSD-201ENST00000294129 ZYXQ15942 572 aaKnown RBP17.53■□□□□ 0.4
NCKIPSD-201ENST00000294129 MEA1Q16626 185 aa17.53■□□□□ 0.4
NCKIPSD-201ENST00000294129 STRIP1Q5VSL9 837 aa17.53■□□□□ 0.4
NCKIPSD-201ENST00000294129 CACNA2D4Q7Z3S7 1137 aa17.53■□□□□ 0.4
NCKIPSD-201ENST00000294129 PSMB7Q99436 277 aa17.53■□□□□ 0.4
NCKIPSD-201ENST00000294129 DHX36Q9H2U1 1008 aaKnown RBP17.53■□□□□ 0.4
NCKIPSD-201ENST00000294129 MYH10P35580 1976 aa17.53■□□□□ 0.4
NCKIPSD-201ENST00000294129 LRRC53A6NM62 1247 aa17.52■□□□□ 0.4
NCKIPSD-201ENST00000294129 ZNF185O15231 689 aa17.52■□□□□ 0.4
NCKIPSD-201ENST00000294129 ARHGAP4P98171 946 aa17.52■□□□□ 0.4
NCKIPSD-201ENST00000294129 ARID5AQ03989 594 aa17.52■□□□□ 0.4
NCKIPSD-201ENST00000294129 LRRC55Q6ZSA7 311 aa17.52■□□□□ 0.4
NCKIPSD-201ENST00000294129 ERGIC2Q96RQ1 377 aa17.52■□□□□ 0.4
NCKIPSD-201ENST00000294129 CSRNP1Q96S65 589 aa17.52■□□□□ 0.4
NCKIPSD-201ENST00000294129 EHD4Q9H223 541 aa17.52■□□□□ 0.4
NCKIPSD-201ENST00000294129 JADE2Q9NQC1 790 aa17.52■□□□□ 0.4
NCKIPSD-201ENST00000294129 ATF5Q9Y2D1 282 aaPredicted RBP17.52■□□□□ 0.4
NCKIPSD-201ENST00000294129 COL11A2P13942 1736 aaPredicted RBP17.52■□□□□ 0.4
NCKIPSD-201ENST00000294129 MEIS2O14770 477 aa17.52■□□□□ 0.4
NCKIPSD-201ENST00000294129 ZNF263O14978 683 aa17.52■□□□□ 0.4
NCKIPSD-201ENST00000294129 AKR1B10O60218 316 aa17.52■□□□□ 0.4
NCKIPSD-201ENST00000294129 PSMC6P62333 389 aa17.52■□□□□ 0.4
NCKIPSD-201ENST00000294129 RETREG2Q8NC44 543 aa17.52■□□□□ 0.4
NCKIPSD-201ENST00000294129 CYP2W1Q8TAV3 490 aa17.52■□□□□ 0.4
NCKIPSD-201ENST00000294129 CAGE1Q8TC20 777 aa17.52■□□□□ 0.4
NCKIPSD-201ENST00000294129 MTMR8Q96EF0 704 aa17.52■□□□□ 0.4
NCKIPSD-201ENST00000294129 PRMT6Q96LA8 375 aaPredicted RBP17.52■□□□□ 0.4
NCKIPSD-201ENST00000294129 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.52■□□□□ 0.4
NCKIPSD-201ENST00000294129 MYO1AQ9UBC5 1043 aa17.52■□□□□ 0.4
NCKIPSD-201ENST00000294129 MYO3BQ8WXR4 1341 aa17.52■□□□□ 0.4
NCKIPSD-201ENST00000294129 SPDYE3A6NKU9 549 aa17.52■□□□□ 0.39
NCKIPSD-201ENST00000294129 GCFC2P16383 781 aaKnown RBP17.52■□□□□ 0.39
NCKIPSD-201ENST00000294129 SEMA3FQ13275 785 aa17.52■□□□□ 0.39
NCKIPSD-201ENST00000294129 FBXO11Q86XK2 927 aa17.52■□□□□ 0.39
NCKIPSD-201ENST00000294129 ARHGAP20Q9P2F6 1191 aa17.52■□□□□ 0.39
NCKIPSD-201ENST00000294129 SIK3Q9Y2K2 1263 aa17.52■□□□□ 0.39
NCKIPSD-201ENST00000294129 FGFR1OPO95684 399 aaKnown RBP17.51■□□□□ 0.39
NCKIPSD-201ENST00000294129 EIF4A3P38919 411 aaKnown RBP17.51■□□□□ 0.39
NCKIPSD-201ENST00000294129 VSNL1P62760 191 aa17.51■□□□□ 0.39
NCKIPSD-201ENST00000294129 LRRC63Q05C16 580 aa17.51■□□□□ 0.39
NCKIPSD-201ENST00000294129 KIF5AQ12840 1032 aa17.51■□□□□ 0.39
NCKIPSD-201ENST00000294129 RRP1BQ14684 758 aaKnown RBP17.51■□□□□ 0.39
NCKIPSD-201ENST00000294129 TDRD12Q587J7 1177 aaKnown RBP17.51■□□□□ 0.39
NCKIPSD-201ENST00000294129 AMNQ9BXJ7 453 aa17.51■□□□□ 0.39
NCKIPSD-201ENST00000294129 MLXIPQ9HAP2 919 aa17.51■□□□□ 0.39
NCKIPSD-201ENST00000294129 ZNF76P36508 570 aa17.51■□□□□ 0.39
NCKIPSD-201ENST00000294129 GYS2P54840 703 aa17.51■□□□□ 0.39
NCKIPSD-201ENST00000294129 UBXN2AP68543 259 aa17.51■□□□□ 0.39
NCKIPSD-201ENST00000294129 AMPD2Q01433 879 aa17.51■□□□□ 0.39
NCKIPSD-201ENST00000294129 WHAMMP3Q1A5X7 153 aa17.51■□□□□ 0.39
NCKIPSD-201ENST00000294129 DCAF4Q8WV16 495 aa17.51■□□□□ 0.39
NCKIPSD-201ENST00000294129 IFIH1Q9BYX4 1025 aaKnown RBP17.51■□□□□ 0.39
NCKIPSD-201ENST00000294129 NYAP2Q9P242 653 aa17.51■□□□□ 0.39
NCKIPSD-201ENST00000294129 SAR1BQ9Y6B6 198 aa17.51■□□□□ 0.39
NCKIPSD-201ENST00000294129 ZMYND10O75800 440 aa17.5■□□□□ 0.39
NCKIPSD-201ENST00000294129 OAS2P29728 719 aaKnown RBP17.5■□□□□ 0.39
NCKIPSD-201ENST00000294129 ECE1P42892 770 aa17.5■□□□□ 0.39
NCKIPSD-201ENST00000294129 TMEM179Q6ZVK1 233 aa17.5■□□□□ 0.39
NCKIPSD-201ENST00000294129 CCDC65Q8IXS2 484 aa17.5■□□□□ 0.39
NCKIPSD-201ENST00000294129 NEK11Q8NG66 645 aa17.5■□□□□ 0.39
NCKIPSD-201ENST00000294129 MMS19Q96T76 1030 aa17.5■□□□□ 0.39
NCKIPSD-201ENST00000294129 LRRC27Q9C0I9 530 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms