RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 CLCN6P51797 869 aa17.47■□□□□ 0.39
SSRP1-202ENST00000293880 STX1BP61266 288 aa17.47■□□□□ 0.39
SSRP1-202ENST00000293880 RAB44Q7Z6P3 723 aaPredicted RBP17.47■□□□□ 0.39
SSRP1-202ENST00000293880 FBXO11Q86XK2 927 aa17.47■□□□□ 0.39
SSRP1-202ENST00000293880 TEKT1Q969V4 418 aa17.47■□□□□ 0.39
SSRP1-202ENST00000293880 CTTNBP2Q8WZ74 1663 aa17.47■□□□□ 0.39
SSRP1-202ENST00000293880 TMEM232C9JQI7 657 aa17.47■□□□□ 0.39
SSRP1-202ENST00000293880 N4BP1O75113 896 aaKnown RBP17.47■□□□□ 0.39
SSRP1-202ENST00000293880 C10orf76Q5T2E6 689 aa17.47■□□□□ 0.39
SSRP1-202ENST00000293880 ORC6Q9Y5N6 252 aa17.47■□□□□ 0.39
SSRP1-202ENST00000293880 PCYT1AP49585 367 aa17.47■□□□□ 0.39
SSRP1-202ENST00000293880 EPHB4P54760 987 aa17.47■□□□□ 0.39
SSRP1-202ENST00000293880 DLGAP5Q15398 846 aa17.47■□□□□ 0.39
SSRP1-202ENST00000293880 EFCAB13Q8IY85 973 aa17.47■□□□□ 0.39
SSRP1-202ENST00000293880 IQCDQ96DY2 449 aa17.47■□□□□ 0.39
SSRP1-202ENST00000293880 ZWILCHQ9H900 591 aa17.47■□□□□ 0.39
SSRP1-202ENST00000293880 UBE2TQ9NPD8 197 aaPredicted RBP17.47■□□□□ 0.39
SSRP1-202ENST00000293880 RGS12O14924 1447 aa17.47■□□□□ 0.39
SSRP1-202ENST00000293880 PPIP5K2O43314 1243 aa17.47■□□□□ 0.39
SSRP1-202ENST00000293880 ODR4Q5SWX8 454 aa17.47■□□□□ 0.39
SSRP1-202ENST00000293880 C16orf87Q6PH81 154 aa17.47■□□□□ 0.39
SSRP1-202ENST00000293880 SRGAP2O75044 1071 aa17.47■□□□□ 0.39
SSRP1-202ENST00000293880 ECEL1O95672 775 aa17.47■□□□□ 0.39
SSRP1-202ENST00000293880 NR2F2P24468 414 aa17.46■□□□□ 0.39
SSRP1-202ENST00000293880 ARPP19P56211 112 aa17.46■□□□□ 0.39
SSRP1-202ENST00000293880 USP6NLQ92738 828 aa17.46■□□□□ 0.39
SSRP1-202ENST00000293880 ABCB6Q9NP58 842 aa17.46■□□□□ 0.39
SSRP1-202ENST00000293880 THEGQ9P2T0 379 aa17.46■□□□□ 0.39
SSRP1-202ENST00000293880 PCDHA13Q9Y5I0 950 aa17.46■□□□□ 0.39
SSRP1-202ENST00000293880 MUM1L1Q5H9M0 696 aa17.46■□□□□ 0.39
SSRP1-202ENST00000293880 HESX1Q9UBX0 185 aa17.46■□□□□ 0.39
SSRP1-202ENST00000293880 IPO11Q9UI26 975 aaKnown RBP17.46■□□□□ 0.39
SSRP1-202ENST00000293880 DAAM1Q9Y4D1 1078 aa17.46■□□□□ 0.39
SSRP1-202ENST00000293880 CERKLQ49MI3 558 aaPredicted RBP17.46■□□□□ 0.39
SSRP1-202ENST00000293880 KLHL29Q96CT2 875 aa17.46■□□□□ 0.39
SSRP1-202ENST00000293880 CEP19Q96LK0 163 aa17.46■□□□□ 0.39
SSRP1-202ENST00000293880 EPS15L1Q9UBC2 864 aa17.46■□□□□ 0.39
SSRP1-202ENST00000293880 CREB3O43889 395 aa17.46■□□□□ 0.39
SSRP1-202ENST00000293880 AFPP02771 609 aaKnown RBP17.46■□□□□ 0.39
SSRP1-202ENST00000293880 LMNB1P20700 586 aa17.46■□□□□ 0.39
SSRP1-202ENST00000293880 FAM26FQ5R3K3 315 aa17.46■□□□□ 0.39
SSRP1-202ENST00000293880 TBC1D1Q86TI0 1168 aaPredicted RBP17.46■□□□□ 0.39
SSRP1-202ENST00000293880 ZNF589Q86UQ0 364 aaPredicted RBP17.46■□□□□ 0.39
SSRP1-202ENST00000293880 LSG1Q9H089 658 aaKnown RBP17.46■□□□□ 0.39
SSRP1-202ENST00000293880 NUP160Q12769 1436 aa17.46■□□□□ 0.39
SSRP1-202ENST00000293880 CD58P19256 250 aa17.46■□□□□ 0.38
SSRP1-202ENST00000293880 EIF4A1P60842 406 aaKnown RBP17.46■□□□□ 0.38
SSRP1-202ENST00000293880 IQCB1Q15051 598 aa17.46■□□□□ 0.38
SSRP1-202ENST00000293880 UNC5CLQ8IV45 518 aa17.46■□□□□ 0.38
SSRP1-202ENST00000293880 TTC30BQ8N4P2 665 aa17.46■□□□□ 0.38
SSRP1-202ENST00000293880 MARCH10Q8NA82 808 aaPredicted RBP17.46■□□□□ 0.38
SSRP1-202ENST00000293880 CACTINQ8WUQ7 758 aaKnown RBP17.46■□□□□ 0.38
SSRP1-202ENST00000293880 FAM193BQ96PV7 902 aaPredicted RBP17.46■□□□□ 0.38
SSRP1-202ENST00000293880 FAM167BQ9BTA0 163 aa17.46■□□□□ 0.38
SSRP1-202ENST00000293880 SUFUQ9UMX1 484 aa17.46■□□□□ 0.38
SSRP1-202ENST00000293880 AKT3Q9Y243 479 aa17.46■□□□□ 0.38
SSRP1-202ENST00000293880 DYNLL1P63167 89 aaKnown RBP17.45■□□□□ 0.38
SSRP1-202ENST00000293880 RBM6P78332 1123 aaKnown RBP17.45■□□□□ 0.38
SSRP1-202ENST00000293880 TTLL7Q6ZT98 887 aa17.45■□□□□ 0.38
SSRP1-202ENST00000293880 EAF2Q96CJ1 260 aaPredicted RBP17.45■□□□□ 0.38
SSRP1-202ENST00000293880 GUCY2CP25092 1073 aa17.45■□□□□ 0.38
SSRP1-202ENST00000293880 ART3Q13508 389 aa17.45■□□□□ 0.38
SSRP1-202ENST00000293880 ARID5BQ14865 1188 aa17.45■□□□□ 0.38
SSRP1-202ENST00000293880 GJC2Q5T442 439 aaPredicted RBP17.45■□□□□ 0.38
SSRP1-202ENST00000293880 SPOPLQ6IQ16 392 aa17.45■□□□□ 0.38
SSRP1-202ENST00000293880 TOGARAM2Q6ZUX3 1019 aa17.45■□□□□ 0.38
SSRP1-202ENST00000293880 DNAAF3Q8N9W5 541 aa17.45■□□□□ 0.38
SSRP1-202ENST00000293880 BBOF1Q8ND07 529 aa17.45■□□□□ 0.38
SSRP1-202ENST00000293880 RABGGTAQ92696 567 aa17.45■□□□□ 0.38
SSRP1-202ENST00000293880 CHL1O00533 1208 aa17.45■□□□□ 0.38
SSRP1-202ENST00000293880 ACSL3O95573 720 aa17.45■□□□□ 0.38
SSRP1-202ENST00000293880 PDE6AP16499 860 aa17.45■□□□□ 0.38
SSRP1-202ENST00000293880 BRD2P25440 801 aaKnown RBP17.45■□□□□ 0.38
SSRP1-202ENST00000293880 DAB2P98082 770 aa17.45■□□□□ 0.38
SSRP1-202ENST00000293880 KIAA0825Q8IV33 1275 aa17.45■□□□□ 0.38
SSRP1-202ENST00000293880 CNPY4Q8N129 248 aa17.45■□□□□ 0.38
SSRP1-202ENST00000293880 CSRNP1Q96S65 589 aa17.45■□□□□ 0.38
SSRP1-202ENST00000293880 GINM1Q9NU53 330 aa17.45■□□□□ 0.38
SSRP1-202ENST00000293880 HACD3Q9P035 362 aa17.45■□□□□ 0.38
SSRP1-202ENST00000293880 CCPG1Q9ULG6 757 aa17.45■□□□□ 0.38
SSRP1-202ENST00000293880 DDIT3P35638 169 aa17.45■□□□□ 0.38
SSRP1-202ENST00000293880 SLC38A10Q9HBR0 1119 aa17.45■□□□□ 0.38
SSRP1-202ENST00000293880 GCNT4Q9P109 453 aa17.45■□□□□ 0.38
SSRP1-202ENST00000293880 H0Y3Z8 333 aa17.45■□□□□ 0.38
SSRP1-202ENST00000293880 MAFGO15525 162 aa17.45■□□□□ 0.38
SSRP1-202ENST00000293880 SMYD3Q9H7B4 428 aa17.45■□□□□ 0.38
SSRP1-202ENST00000293880 TLR3O15455 904 aaKnown RBP17.44■□□□□ 0.38
SSRP1-202ENST00000293880 PUS3Q9BZE2 481 aaKnown RBP17.44■□□□□ 0.38
SSRP1-202ENST00000293880 TSR3Q9UJK0 312 aaKnown RBP17.44■□□□□ 0.38
SSRP1-202ENST00000293880 RAP1GDS1P52306 607 aa17.44■□□□□ 0.38
SSRP1-202ENST00000293880 MAP3K7CLP57077 242 aa17.44■□□□□ 0.38
SSRP1-202ENST00000293880 ESRRGP62508 458 aa17.44■□□□□ 0.38
SSRP1-202ENST00000293880 CDO1Q16878 200 aa17.44■□□□□ 0.38
SSRP1-202ENST00000293880 ANGPTL8Q6UXH0 198 aa17.44■□□□□ 0.38
SSRP1-202ENST00000293880 EIF4A3P38919 411 aaKnown RBP17.44■□□□□ 0.38
SSRP1-202ENST00000293880 GNPTABQ3T906 1256 aa17.44■□□□□ 0.38
SSRP1-202ENST00000293880 NBPF10Q6P3W6 841 aaKnown RBP17.44■□□□□ 0.38
SSRP1-202ENST00000293880 RFX8Q6ZV50 586 aa17.44■□□□□ 0.38
SSRP1-202ENST00000293880 ZNF577Q9BSK1 485 aa17.44■□□□□ 0.38
SSRP1-202ENST00000293880 PHLPP2Q6ZVD8 1323 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms