RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 TMTC3Q6ZXV5 915 aa11.28□□□□□ -0.6
CCDC58-201ENST00000291458 Q7L0L9 218 aa11.28□□□□□ -0.6
CCDC58-201ENST00000291458 FAM126BQ8IXS8 530 aa11.28□□□□□ -0.6
CCDC58-201ENST00000291458 AFG1LQ8WV93 481 aa11.28□□□□□ -0.6
CCDC58-201ENST00000291458 CUL5Q93034 780 aa11.28□□□□□ -0.6
CCDC58-201ENST00000291458 PDCD2LQ9BRP1 358 aa11.28□□□□□ -0.6
CCDC58-201ENST00000291458 SCN10AQ9Y5Y9 1956 aa11.28□□□□□ -0.6
CCDC58-201ENST00000291458 UMODL1Q5DID0 1318 aa11.28□□□□□ -0.6
CCDC58-201ENST00000291458 CNTNAP5Q8WYK1 1306 aa11.28□□□□□ -0.6
CCDC58-201ENST00000291458 SCN5AQ14524 2016 aa11.28□□□□□ -0.6
CCDC58-201ENST00000291458 RBM47A0AV96 593 aaKnown RBP11.27□□□□□ -0.61
CCDC58-201ENST00000291458 POTEMA6NI47 508 aa11.27□□□□□ -0.61
CCDC58-201ENST00000291458 RBAK-RBAKDNI3L0D1 243 aa11.27□□□□□ -0.61
CCDC58-201ENST00000291458 KIAA0355O15063 1070 aa11.27□□□□□ -0.61
CCDC58-201ENST00000291458 NKRFO15226 690 aaKnown RBP eCLIP11.27□□□□□ -0.61
CCDC58-201ENST00000291458 ZBTB43O43298 467 aa11.27□□□□□ -0.61
CCDC58-201ENST00000291458 B4GALT4O60513 344 aa11.27□□□□□ -0.61
CCDC58-201ENST00000291458 CABYRO75952 493 aa11.27□□□□□ -0.61
CCDC58-201ENST00000291458 REC8O95072 547 aa11.27□□□□□ -0.61
CCDC58-201ENST00000291458 GH1P01241 217 aa11.27□□□□□ -0.61
CCDC58-201ENST00000291458 MMP3P08254 477 aa11.27□□□□□ -0.61
CCDC58-201ENST00000291458 ACRP10323 421 aa11.27□□□□□ -0.61
CCDC58-201ENST00000291458 CASTP20810 708 aaKnown RBP11.27□□□□□ -0.61
CCDC58-201ENST00000291458 CCND2P30279 289 aa11.27□□□□□ -0.61
CCDC58-201ENST00000291458 CYP2C18P33260 490 aa11.27□□□□□ -0.61
CCDC58-201ENST00000291458 GNAQP50148 359 aa11.27□□□□□ -0.61
CCDC58-201ENST00000291458 SP4Q02446 784 aa11.27□□□□□ -0.61
CCDC58-201ENST00000291458 APOBRQ0VD83 1088 aa11.27□□□□□ -0.61
CCDC58-201ENST00000291458 KRT32Q14532 448 aa11.27□□□□□ -0.61
CCDC58-201ENST00000291458 BRDTQ58F21 947 aaPredicted RBP11.27□□□□□ -0.61
CCDC58-201ENST00000291458 VARS2Q5ST30 1063 aaKnown RBP11.27□□□□□ -0.61
CCDC58-201ENST00000291458 BLOC1S2Q6QNY1 142 aa11.27□□□□□ -0.61
CCDC58-201ENST00000291458 POTEGQ6S5H5 508 aa11.27□□□□□ -0.61
CCDC58-201ENST00000291458 DHX32Q7L7V1 743 aaKnown RBP11.27□□□□□ -0.61
CCDC58-201ENST00000291458 ANKRD33Q7Z3H0 272 aa11.27□□□□□ -0.61
CCDC58-201ENST00000291458 TMTC2Q8N394 836 aa11.27□□□□□ -0.61
CCDC58-201ENST00000291458 FANCBQ8NB91 859 aa11.27□□□□□ -0.61
CCDC58-201ENST00000291458 RNPC3Q96LT9 517 aaKnown RBP11.27□□□□□ -0.61
CCDC58-201ENST00000291458 LZTS2Q9BRK4 669 aa11.27□□□□□ -0.61
CCDC58-201ENST00000291458 MTG1Q9BT17 334 aaPredicted RBP11.27□□□□□ -0.61
CCDC58-201ENST00000291458 MTA3Q9BTC8 594 aa11.27□□□□□ -0.61
CCDC58-201ENST00000291458 TRMT13Q9NUP7 481 aaKnown RBP11.27□□□□□ -0.61
CCDC58-201ENST00000291458 POLR3EQ9NVU0 708 aa11.27□□□□□ -0.61
CCDC58-201ENST00000291458 RTEL1Q9NZ71 1219 aa11.27□□□□□ -0.61
CCDC58-201ENST00000291458 PKD2L1Q9P0L9 805 aa11.27□□□□□ -0.61
CCDC58-201ENST00000291458 TBX21Q9UL17 535 aa11.27□□□□□ -0.61
CCDC58-201ENST00000291458 Q9Y3F1 56 aa11.27□□□□□ -0.61
CCDC58-201ENST00000291458 SNX14Q9Y5W7 946 aa11.27□□□□□ -0.61
CCDC58-201ENST00000291458 GRIN2DO15399 1336 aa11.27□□□□□ -0.61
CCDC58-201ENST00000291458 TANC1Q9C0D5 1861 aa11.26□□□□□ -0.61
CCDC58-201ENST00000291458 CYP2C9P11712 490 aa11.26□□□□□ -0.61
CCDC58-201ENST00000291458 HSPA4P34932 840 aa11.26□□□□□ -0.61
CCDC58-201ENST00000291458 CDK7P50613 346 aa11.26□□□□□ -0.61
CCDC58-201ENST00000291458 FOSBP53539 338 aa11.26□□□□□ -0.61
CCDC58-201ENST00000291458 CCL23P55773 120 aa11.26□□□□□ -0.61
CCDC58-201ENST00000291458 EXOSC10Q01780 885 aaKnown RBP11.26□□□□□ -0.61
CCDC58-201ENST00000291458 ARHGAP1Q07960 439 aa11.26□□□□□ -0.61
CCDC58-201ENST00000291458 TRAF1Q13077 416 aa11.26□□□□□ -0.61
CCDC58-201ENST00000291458 Q6ZUG5 572 aa11.26□□□□□ -0.61
CCDC58-201ENST00000291458 SGMS1Q86VZ5 419 aa11.26□□□□□ -0.61
CCDC58-201ENST00000291458 BRF1Q92994 677 aa11.26□□□□□ -0.61
CCDC58-201ENST00000291458 PGBD1Q96JS3 809 aa11.26□□□□□ -0.61
CCDC58-201ENST00000291458 FAM161BQ96MY7 647 aa11.26□□□□□ -0.61
CCDC58-201ENST00000291458 TOX2Q96NM4 488 aa11.26□□□□□ -0.61
CCDC58-201ENST00000291458 HS3ST6Q96QI5 342 aa11.26□□□□□ -0.61
CCDC58-201ENST00000291458 IWS1Q96ST2 819 aa11.26□□□□□ -0.61
CCDC58-201ENST00000291458 MAP3K14Q99558 947 aa11.26□□□□□ -0.61
CCDC58-201ENST00000291458 ALG1Q9BT22 464 aa11.26□□□□□ -0.61
CCDC58-201ENST00000291458 HIPK3Q9H422 1215 aa11.26□□□□□ -0.61
CCDC58-201ENST00000291458 EIF3JO75822 258 aaKnown RBP11.25□□□□□ -0.61
CCDC58-201ENST00000291458 RGS20O76081 388 aa11.25□□□□□ -0.61
CCDC58-201ENST00000291458 GGPS1O95749 300 aa11.25□□□□□ -0.61
CCDC58-201ENST00000291458 TIMP1P01033 207 aa11.25□□□□□ -0.61
CCDC58-201ENST00000291458 CSF2RAP15509 400 aa11.25□□□□□ -0.61
CCDC58-201ENST00000291458 UBA1P22314 1058 aaKnown RBP11.25□□□□□ -0.61
CCDC58-201ENST00000291458 NAPAP54920 295 aa11.25□□□□□ -0.61
CCDC58-201ENST00000291458 NKX3-2P78367 333 aa11.25□□□□□ -0.61
CCDC58-201ENST00000291458 NBPF20Q3BBV1 942 aa11.25□□□□□ -0.61
CCDC58-201ENST00000291458 WWC2Q6AWC2 1192 aa11.25□□□□□ -0.61
CCDC58-201ENST00000291458 CCDC62Q6P9F0 684 aa11.25□□□□□ -0.61
CCDC58-201ENST00000291458 DHX37Q8IY37 1157 aaKnown RBP11.25□□□□□ -0.61
CCDC58-201ENST00000291458 ZNF454Q8N9F8 522 aa11.25□□□□□ -0.61
CCDC58-201ENST00000291458 EPAS1Q99814 870 aa11.25□□□□□ -0.61
CCDC58-201ENST00000291458 ALDH8A1Q9H2A2 487 aaPredicted RBP11.25□□□□□ -0.61
CCDC58-201ENST00000291458 RBM28Q9NW13 759 aaKnown RBP11.25□□□□□ -0.61
CCDC58-201ENST00000291458 NOD1Q9Y239 953 aa11.25□□□□□ -0.61
CCDC58-201ENST00000291458 GBF1Q92538 1859 aa11.24□□□□□ -0.61
CCDC58-201ENST00000291458 CD4P01730 458 aa11.24□□□□□ -0.61
CCDC58-201ENST00000291458 CDC27P30260 824 aa11.24□□□□□ -0.61
CCDC58-201ENST00000291458 METAP2P50579 478 aaKnown RBP eCLIP11.24□□□□□ -0.61
CCDC58-201ENST00000291458 GHRHRQ02643 423 aa11.24□□□□□ -0.61
CCDC58-201ENST00000291458 DEFB123Q8N688 67 aa11.24□□□□□ -0.61
CCDC58-201ENST00000291458 DDX12PQ92771 950 aa11.24□□□□□ -0.61
CCDC58-201ENST00000291458 SCLYQ96I15 445 aa11.24□□□□□ -0.61
CCDC58-201ENST00000291458 SPATA33Q96N06 139 aa11.24□□□□□ -0.61
CCDC58-201ENST00000291458 NOC4LQ9BVI4 516 aaKnown RBP11.24□□□□□ -0.61
CCDC58-201ENST00000291458 UPF3BQ9BZI7 483 aaKnown RBP11.24□□□□□ -0.61
CCDC58-201ENST00000291458 PSTPIP2Q9H939 334 aa11.24□□□□□ -0.61
CCDC58-201ENST00000291458 DDX41Q9UJV9 622 aaKnown RBP11.24□□□□□ -0.61
CCDC58-201ENST00000291458 TRIP12Q14669 1992 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms