RNA–Protein interactions for RNA: ENST00000289957.2

CHRNB3-201, Transcript of cholinergic receptor nicotinic beta 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB3, Length 2,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3-201ENST00000289957 PKNOX2Q96KN3 472 aa12.92□□□□□ -0.34
CHRNB3-201ENST00000289957 FGD4Q96M96 766 aa12.92□□□□□ -0.34
CHRNB3-201ENST00000289957 TIGD1Q96MW7 591 aa12.92□□□□□ -0.34
CHRNB3-201ENST00000289957 RMDN3Q96TC7 470 aa12.92□□□□□ -0.34
CHRNB3-201ENST00000289957 BCAS3Q9H6U6 928 aa12.92□□□□□ -0.34
CHRNB3-201ENST00000289957 PKD2L1Q9P0L9 805 aa12.92□□□□□ -0.34
CHRNB3-201ENST00000289957 PNMA3Q9UL41 463 aa12.92□□□□□ -0.34
CHRNB3-201ENST00000289957 MCM3APO60318 1980 aa12.92□□□□□ -0.34
CHRNB3-201ENST00000289957 FAM237AA0A1B0GTK4 181 aa12.92□□□□□ -0.34
CHRNB3-201ENST00000289957 A0A1B0GVL5 298 aa12.92□□□□□ -0.34
CHRNB3-201ENST00000289957 VWA3AA6NCI4 1184 aa12.92□□□□□ -0.34
CHRNB3-201ENST00000289957 SHC4Q6S5L8 630 aa12.92□□□□□ -0.34
CHRNB3-201ENST00000289957 GPRC5AQ8NFJ5 357 aa12.92□□□□□ -0.34
CHRNB3-201ENST00000289957 HAS1Q92839 578 aa12.92□□□□□ -0.34
CHRNB3-201ENST00000289957 PARK7Q99497 189 aaKnown RBP12.92□□□□□ -0.34
CHRNB3-201ENST00000289957 ARHGAP39Q9C0H5 1083 aa12.92□□□□□ -0.34
CHRNB3-201ENST00000289957 CSRNP2Q9H175 543 aa12.92□□□□□ -0.34
CHRNB3-201ENST00000289957 TELO2Q9Y4R8 837 aa12.92□□□□□ -0.34
CHRNB3-201ENST00000289957 ZNFX1Q9P2E3 1918 aaKnown RBP12.91□□□□□ -0.34
CHRNB3-201ENST00000289957 SORBS3O60504 671 aa12.91□□□□□ -0.34
CHRNB3-201ENST00000289957 TBC1D8O95759 1140 aa12.91□□□□□ -0.34
CHRNB3-201ENST00000289957 TUBB4AP04350 444 aa12.91□□□□□ -0.34
CHRNB3-201ENST00000289957 FDX1P10109 184 aa12.91□□□□□ -0.34
CHRNB3-201ENST00000289957 MYCLP12524 364 aaPredicted RBP12.91□□□□□ -0.34
CHRNB3-201ENST00000289957 ITGB5P18084 799 aa12.91□□□□□ -0.34
CHRNB3-201ENST00000289957 ATP2C1P98194 919 aaPredicted RBP12.91□□□□□ -0.34
CHRNB3-201ENST00000289957 AP3B2Q13367 1082 aa12.91□□□□□ -0.34
CHRNB3-201ENST00000289957 TSC1Q92574 1164 aa12.91□□□□□ -0.34
CHRNB3-201ENST00000289957 EPSTI1Q96J88 318 aa12.91□□□□□ -0.34
CHRNB3-201ENST00000289957 C16orf45Q96MC5 204 aaPredicted RBP12.91□□□□□ -0.34
CHRNB3-201ENST00000289957 WDR11Q9BZH6 1224 aa12.91□□□□□ -0.34
CHRNB3-201ENST00000289957 PXMP2Q9NR77 195 aa12.91□□□□□ -0.34
CHRNB3-201ENST00000289957 KIAA1468Q9P260 1216 aa12.91□□□□□ -0.34
CHRNB3-201ENST00000289957 DDX25Q9UHL0 483 aaKnown RBP12.91□□□□□ -0.34
CHRNB3-201ENST00000289957 SLC45A1Q9Y2W3 748 aa12.91□□□□□ -0.34
CHRNB3-201ENST00000289957 IGLV3-22A0A075B6J6 115 aa12.91□□□□□ -0.34
CHRNB3-201ENST00000289957 A0A087X0B3 334 aa12.91□□□□□ -0.34
CHRNB3-201ENST00000289957 SOWAHBA6NEL2 793 aa12.91□□□□□ -0.34
CHRNB3-201ENST00000289957 ARP10275 920 aa12.91□□□□□ -0.34
CHRNB3-201ENST00000289957 PGM5Q15124 567 aa12.91□□□□□ -0.34
CHRNB3-201ENST00000289957 TPD52L1Q16890 204 aaPredicted RBP12.91□□□□□ -0.34
CHRNB3-201ENST00000289957 CCDC112Q8NEF3 446 aa12.91□□□□□ -0.34
CHRNB3-201ENST00000289957 HHIPL1Q96JK4 782 aa12.91□□□□□ -0.34
CHRNB3-201ENST00000289957 CGNQ9P2M7 1197 aaKnown RBP12.91□□□□□ -0.34
CHRNB3-201ENST00000289957 RPTORQ8N122 1335 aa12.91□□□□□ -0.34
CHRNB3-201ENST00000289957 RGS20O76081 388 aa12.9□□□□□ -0.34
CHRNB3-201ENST00000289957 BCRP11274 1271 aa12.9□□□□□ -0.34
CHRNB3-201ENST00000289957 TM4SF4P48230 202 aa12.9□□□□□ -0.34
CHRNB3-201ENST00000289957 NLRP12P59046 1061 aa12.9□□□□□ -0.34
CHRNB3-201ENST00000289957 GHRHRQ02643 423 aa12.9□□□□□ -0.34
CHRNB3-201ENST00000289957 TMEM63BQ5T3F8 832 aa12.9□□□□□ -0.34
CHRNB3-201ENST00000289957 CEP135Q66GS9 1140 aa12.9□□□□□ -0.34
CHRNB3-201ENST00000289957 EEPD1Q7L9B9 569 aa12.9□□□□□ -0.34
CHRNB3-201ENST00000289957 MCF2L2Q86YR7 1114 aa12.9□□□□□ -0.34
CHRNB3-201ENST00000289957 FAM177A1Q8N128 213 aaPredicted RBP12.9□□□□□ -0.34
CHRNB3-201ENST00000289957 AOPEPQ8N6M6 819 aa12.9□□□□□ -0.34
CHRNB3-201ENST00000289957 ERCC4Q92889 916 aaPredicted RBP12.9□□□□□ -0.34
CHRNB3-201ENST00000289957 PDCD2LQ9BRP1 358 aa12.9□□□□□ -0.34
CHRNB3-201ENST00000289957 POTEMA6NI47 508 aa12.9□□□□□ -0.35
CHRNB3-201ENST00000289957 IKBKBO14920 756 aa12.9□□□□□ -0.35
CHRNB3-201ENST00000289957 COBLO75128 1261 aa12.9□□□□□ -0.35
CHRNB3-201ENST00000289957 CMA1P23946 247 aa12.9□□□□□ -0.35
CHRNB3-201ENST00000289957 TECP42680 631 aa12.9□□□□□ -0.35
CHRNB3-201ENST00000289957 TXKP42681 527 aa12.9□□□□□ -0.35
CHRNB3-201ENST00000289957 TRAPPC10P48553 1259 aa12.9□□□□□ -0.35
CHRNB3-201ENST00000289957 NDUFA8P51970 172 aa12.9□□□□□ -0.35
CHRNB3-201ENST00000289957 DMTNQ08495 405 aa12.9□□□□□ -0.35
CHRNB3-201ENST00000289957 ARHGEF16Q5VV41 709 aa12.9□□□□□ -0.35
CHRNB3-201ENST00000289957 C17orf99Q6UX52 265 aa12.9□□□□□ -0.35
CHRNB3-201ENST00000289957 CHST13Q8NET6 341 aa12.9□□□□□ -0.35
CHRNB3-201ENST00000289957 TSKSQ9UJT2 592 aa12.9□□□□□ -0.35
CHRNB3-201ENST00000289957 PRDM4Q9UKN5 801 aa12.9□□□□□ -0.35
CHRNB3-201ENST00000289957 PLXNB2O15031 1838 aa12.89□□□□□ -0.35
CHRNB3-201ENST00000289957 DOCK5Q9H7D0 1870 aa12.89□□□□□ -0.35
CHRNB3-201ENST00000289957 A0A087WWV3 80 aa12.89□□□□□ -0.35
CHRNB3-201ENST00000289957 TLR2O60603 784 aa12.89□□□□□ -0.35
CHRNB3-201ENST00000289957 PTPREP23469 700 aa12.89□□□□□ -0.35
CHRNB3-201ENST00000289957 TPM4P67936 248 aa12.89□□□□□ -0.35
CHRNB3-201ENST00000289957 NOGQ13253 232 aa12.89□□□□□ -0.35
CHRNB3-201ENST00000289957 LRRC15Q8TF66 581 aa12.89□□□□□ -0.35
CHRNB3-201ENST00000289957 MTMR9Q96QG7 549 aa12.89□□□□□ -0.35
CHRNB3-201ENST00000289957 PLIN2Q99541 437 aa12.89□□□□□ -0.35
CHRNB3-201ENST00000289957 GTPBP4Q9BZE4 634 aaKnown RBP12.89□□□□□ -0.35
CHRNB3-201ENST00000289957 MORF4L1Q9UBU8 362 aa12.89□□□□□ -0.35
CHRNB3-201ENST00000289957 MSH4O15457 936 aa12.88□□□□□ -0.35
CHRNB3-201ENST00000289957 PPP6R2O75170 966 aa12.88□□□□□ -0.35
CHRNB3-201ENST00000289957 TRPA1O75762 1119 aa12.88□□□□□ -0.35
CHRNB3-201ENST00000289957 ADORA2AP29274 412 aa12.88□□□□□ -0.35
CHRNB3-201ENST00000289957 CALCRLQ16602 461 aa12.88□□□□□ -0.35
CHRNB3-201ENST00000289957 FAM110CQ1W6H9 321 aa12.88□□□□□ -0.35
CHRNB3-201ENST00000289957 GPR142Q7Z601 462 aa12.88□□□□□ -0.35
CHRNB3-201ENST00000289957 ELOA2Q8IYF1 753 aaPredicted RBP12.88□□□□□ -0.35
CHRNB3-201ENST00000289957 CCAR2Q8N163 923 aaKnown RBP12.88□□□□□ -0.35
CHRNB3-201ENST00000289957 PDILTQ8N807 584 aa12.88□□□□□ -0.35
CHRNB3-201ENST00000289957 KRI1Q8N9T8 703 aaKnown RBP12.88□□□□□ -0.35
CHRNB3-201ENST00000289957 ETNPPLQ8TBG4 499 aa12.88□□□□□ -0.35
CHRNB3-201ENST00000289957 MMP19Q99542 508 aa12.88□□□□□ -0.35
CHRNB3-201ENST00000289957 NUDT12Q9BQG2 462 aa12.88□□□□□ -0.35
CHRNB3-201ENST00000289957 GLT8D2Q9H1C3 349 aa12.88□□□□□ -0.35
CHRNB3-201ENST00000289957 ATP9AO75110 1047 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms