RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 IFIH1Q9BYX4 1025 aaKnown RBP12.47□□□□□ -0.41
NPC1L1-201ENST00000289547 SCG2P13521 617 aa12.46□□□□□ -0.41
NPC1L1-201ENST00000289547 ZKSCAN8Q15776 578 aaPredicted RBP12.46□□□□□ -0.41
NPC1L1-201ENST00000289547 MFSD14CQ5VZR4 134 aa12.46□□□□□ -0.41
NPC1L1-201ENST00000289547 MGARPQ8TDB4 240 aa12.46□□□□□ -0.41
NPC1L1-201ENST00000289547 ENC1O14682 589 aa12.46□□□□□ -0.41
NPC1L1-201ENST00000289547 LPXNO60711 386 aa12.46□□□□□ -0.41
NPC1L1-201ENST00000289547 CCND2P30279 289 aa12.46□□□□□ -0.41
NPC1L1-201ENST00000289547 BIRC2Q13490 618 aa12.46□□□□□ -0.41
NPC1L1-201ENST00000289547 NCAPH2Q6IBW4 605 aa12.46□□□□□ -0.41
NPC1L1-201ENST00000289547 RSPH3Q86UC2 560 aa12.46□□□□□ -0.41
NPC1L1-201ENST00000289547 VPS52Q8N1B4 723 aa12.46□□□□□ -0.41
NPC1L1-201ENST00000289547 ANKRD7Q92527 254 aa12.46□□□□□ -0.41
NPC1L1-201ENST00000289547 SLC4A9Q96Q91 983 aa12.46□□□□□ -0.41
NPC1L1-201ENST00000289547 VCX3BQ9H321 246 aa12.46□□□□□ -0.41
NPC1L1-201ENST00000289547 ZSWIM6Q9HCJ5 1215 aa12.46□□□□□ -0.41
NPC1L1-201ENST00000289547 MTUS1Q9ULD2 1270 aa12.46□□□□□ -0.41
NPC1L1-201ENST00000289547 DDX39AO00148 427 aaKnown RBP12.46□□□□□ -0.42
NPC1L1-201ENST00000289547 CALCRLQ16602 461 aa12.46□□□□□ -0.42
NPC1L1-201ENST00000289547 SLC9C1Q4G0N8 1177 aa12.46□□□□□ -0.42
NPC1L1-201ENST00000289547 HS2ST1Q7LGA3 356 aa12.46□□□□□ -0.42
NPC1L1-201ENST00000289547 MIER3Q7Z3K6 550 aa12.46□□□□□ -0.42
NPC1L1-201ENST00000289547 TMEM106CQ9BVX2 250 aa12.46□□□□□ -0.42
NPC1L1-201ENST00000289547 GBA2Q9HCG7 927 aaPredicted RBP12.46□□□□□ -0.42
NPC1L1-201ENST00000289547 GUCY2CP25092 1073 aa12.46□□□□□ -0.42
NPC1L1-201ENST00000289547 TTC38Q5R3I4 469 aa12.46□□□□□ -0.42
NPC1L1-201ENST00000289547 TXNDC9O14530 226 aa12.45□□□□□ -0.42
NPC1L1-201ENST00000289547 DDNO94850 711 aaPredicted RBP12.45□□□□□ -0.42
NPC1L1-201ENST00000289547 KRT40Q6A162 431 aa12.45□□□□□ -0.42
NPC1L1-201ENST00000289547 CDC42EP5Q6NZY7 148 aa12.45□□□□□ -0.42
NPC1L1-201ENST00000289547 CROCCP2Q86T23 111 aa12.45□□□□□ -0.42
NPC1L1-201ENST00000289547 SIRT2Q8IXJ6 389 aa12.45□□□□□ -0.42
NPC1L1-201ENST00000289547 SLFN12Q8IYM2 578 aa12.45□□□□□ -0.42
NPC1L1-201ENST00000289547 TRIM58Q8NG06 486 aa12.45□□□□□ -0.42
NPC1L1-201ENST00000289547 DPF2Q92785 391 aa12.45□□□□□ -0.42
NPC1L1-201ENST00000289547 IMPG2Q9BZV3 1241 aa12.45□□□□□ -0.42
NPC1L1-201ENST00000289547 SERTAD1Q9UHV2 236 aa12.45□□□□□ -0.42
NPC1L1-201ENST00000289547 TRPC6Q9Y210 931 aa12.45□□□□□ -0.42
NPC1L1-201ENST00000289547 HIBCHQ6NVY1 386 aaPredicted RBP12.45□□□□□ -0.42
NPC1L1-201ENST00000289547 PI4K2BQ8TCG2 481 aa12.45□□□□□ -0.42
NPC1L1-201ENST00000289547 RGS16O15492 202 aaPredicted RBP12.45□□□□□ -0.42
NPC1L1-201ENST00000289547 GTF2A2P52657 109 aa12.45□□□□□ -0.42
NPC1L1-201ENST00000289547 SV2BQ7L1I2 683 aa12.45□□□□□ -0.42
NPC1L1-201ENST00000289547 RPUSD2Q8IZ73 545 aaKnown RBP12.45□□□□□ -0.42
NPC1L1-201ENST00000289547 BLIDQ8IZY5 108 aa12.45□□□□□ -0.42
NPC1L1-201ENST00000289547 PHKBQ93100 1093 aa12.45□□□□□ -0.42
NPC1L1-201ENST00000289547 EPC1Q9H2F5 836 aa12.45□□□□□ -0.42
NPC1L1-201ENST00000289547 EPN1Q9Y6I3 576 aaPredicted RBP12.45□□□□□ -0.42
NPC1L1-201ENST00000289547 USP27XA6NNY8 438 aa12.45□□□□□ -0.42
NPC1L1-201ENST00000289547 STRN3Q13033 797 aa12.45□□□□□ -0.42
NPC1L1-201ENST00000289547 SEPT2Q15019 361 aa12.45□□□□□ -0.42
NPC1L1-201ENST00000289547 RPS6KA1Q15418 735 aa12.45□□□□□ -0.42
NPC1L1-201ENST00000289547 CCDC65Q8IXS2 484 aa12.45□□□□□ -0.42
NPC1L1-201ENST00000289547 RAET1EQ8TD07 263 aa12.45□□□□□ -0.42
NPC1L1-201ENST00000289547 TEKT3Q9BXF9 490 aa12.45□□□□□ -0.42
NPC1L1-201ENST00000289547 CXorf56Q9H5V9 222 aa12.45□□□□□ -0.42
NPC1L1-201ENST00000289547 EXOC7Q9UPT5 735 aa12.45□□□□□ -0.42
NPC1L1-201ENST00000289547 AKAP12Q02952 1782 aa12.44□□□□□ -0.42
NPC1L1-201ENST00000289547 KIF1CO43896 1103 aaKnown RBP12.44□□□□□ -0.42
NPC1L1-201ENST00000289547 PFDN1O60925 122 aa12.44□□□□□ -0.42
NPC1L1-201ENST00000289547 MAP7Q14244 749 aa12.44□□□□□ -0.42
NPC1L1-201ENST00000289547 CLEC17AQ6ZS10 378 aa12.44□□□□□ -0.42
NPC1L1-201ENST00000289547 ANKRD42Q8N9B4 389 aa12.44□□□□□ -0.42
NPC1L1-201ENST00000289547 FERMT2Q96AC1 680 aa12.44□□□□□ -0.42
NPC1L1-201ENST00000289547 NRBP2Q9NSY0 501 aa12.44□□□□□ -0.42
NPC1L1-201ENST00000289547 TSKSQ9UJT2 592 aa12.44□□□□□ -0.42
NPC1L1-201ENST00000289547 FAM184BQ9ULE4 1060 aa12.44□□□□□ -0.42
NPC1L1-201ENST00000289547 KCNH4Q9UQ05 1017 aa12.44□□□□□ -0.42
NPC1L1-201ENST00000289547 HYOU1Q9Y4L1 999 aa12.44□□□□□ -0.42
NPC1L1-201ENST00000289547 GJC1P36383 396 aa12.44□□□□□ -0.42
NPC1L1-201ENST00000289547 TXKP42681 527 aa12.44□□□□□ -0.42
NPC1L1-201ENST00000289547 PLCB3Q01970 1234 aa12.44□□□□□ -0.42
NPC1L1-201ENST00000289547 ALX1Q15699 326 aa12.44□□□□□ -0.42
NPC1L1-201ENST00000289547 FYB2Q5VWT5 728 aa12.44□□□□□ -0.42
NPC1L1-201ENST00000289547 TYW1BQ6NUM6 668 aa12.44□□□□□ -0.42
NPC1L1-201ENST00000289547 TNPO2O14787 897 aaKnown RBP12.44□□□□□ -0.42
NPC1L1-201ENST00000289547 CTNND1O60716 968 aaKnown RBP12.44□□□□□ -0.42
NPC1L1-201ENST00000289547 CMA1P23946 247 aa12.44□□□□□ -0.42
NPC1L1-201ENST00000289547 TMOD1P28289 359 aa12.44□□□□□ -0.42
NPC1L1-201ENST00000289547 RFC1P35251 1148 aaPredicted RBP12.44□□□□□ -0.42
NPC1L1-201ENST00000289547 SESN3P58005 492 aa12.44□□□□□ -0.42
NPC1L1-201ENST00000289547 APBA1Q02410 837 aa12.44□□□□□ -0.42
NPC1L1-201ENST00000289547 ZNF710Q8N1W2 664 aa12.44□□□□□ -0.42
NPC1L1-201ENST00000289547 ZNF280CQ8ND82 737 aa12.44□□□□□ -0.42
NPC1L1-201ENST00000289547 NOL3O60936 208 aaKnown RBP12.44□□□□□ -0.42
NPC1L1-201ENST00000289547 SLFN14P0C7P3 912 aa12.44□□□□□ -0.42
NPC1L1-201ENST00000289547 CCDC144BQ3MJ40 725 aa12.44□□□□□ -0.42
NPC1L1-201ENST00000289547 LPAR1Q92633 364 aa12.44□□□□□ -0.42
NPC1L1-201ENST00000289547 LSG1Q9H089 658 aaKnown RBP12.44□□□□□ -0.42
NPC1L1-201ENST00000289547 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.44□□□□□ -0.42
NPC1L1-201ENST00000289547 CYP2D7A0A087X1C5 515 aa12.43□□□□□ -0.42
NPC1L1-201ENST00000289547 TRAF5O00463 557 aa12.43□□□□□ -0.42
NPC1L1-201ENST00000289547 TCP1P17987 556 aaKnown RBP12.43□□□□□ -0.42
NPC1L1-201ENST00000289547 UBXN2AP68543 259 aa12.43□□□□□ -0.42
NPC1L1-201ENST00000289547 SH2D4BQ5SQS7 431 aa12.43□□□□□ -0.42
NPC1L1-201ENST00000289547 ZNF589Q86UQ0 364 aaPredicted RBP12.43□□□□□ -0.42
NPC1L1-201ENST00000289547 PLA2G4DQ86XP0 818 aa12.43□□□□□ -0.42
NPC1L1-201ENST00000289547 VPS54Q9P1Q0 977 aa12.43□□□□□ -0.42
NPC1L1-201ENST00000289547 KLHL14Q9P2G3 628 aa12.43□□□□□ -0.42
NPC1L1-201ENST00000289547 LRWD1Q9UFC0 647 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms