RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 LETM2Q2VYF4 491 aa9.51□□□□□ -0.89
PTPDC1-201ENST00000288976 Q3C1V9 767 aa9.51□□□□□ -0.89
PTPDC1-201ENST00000288976 ZNF792Q3KQV3 632 aa9.51□□□□□ -0.89
PTPDC1-201ENST00000288976 GPR142Q7Z601 462 aa9.51□□□□□ -0.89
PTPDC1-201ENST00000288976 NLRX1Q86UT6 975 aa9.51□□□□□ -0.89
PTPDC1-201ENST00000288976 ELOA2Q8IYF1 753 aaPredicted RBP9.51□□□□□ -0.89
PTPDC1-201ENST00000288976 RMDN3Q96TC7 470 aa9.51□□□□□ -0.89
PTPDC1-201ENST00000288976 MXRA8Q9BRK3 442 aa9.51□□□□□ -0.89
PTPDC1-201ENST00000288976 SYNGAP1Q96PV0 1343 aa9.51□□□□□ -0.89
PTPDC1-201ENST00000288976 ASB14A6NK59 587 aa9.51□□□□□ -0.89
PTPDC1-201ENST00000288976 FIBPO43427 364 aa9.51□□□□□ -0.89
PTPDC1-201ENST00000288976 CRHR2Q13324 411 aa9.51□□□□□ -0.89
PTPDC1-201ENST00000288976 PDIA5Q14554 519 aa9.51□□□□□ -0.89
PTPDC1-201ENST00000288976 NFKBIBQ15653 356 aa9.51□□□□□ -0.89
PTPDC1-201ENST00000288976 CALCRLQ16602 461 aa9.51□□□□□ -0.89
PTPDC1-201ENST00000288976 RESP18Q5W5W9 173 aa9.51□□□□□ -0.89
PTPDC1-201ENST00000288976 FAM173BQ6P4H8 233 aa9.51□□□□□ -0.89
PTPDC1-201ENST00000288976 TRMT44Q8IYL2 757 aaKnown RBP9.51□□□□□ -0.89
PTPDC1-201ENST00000288976 ETNPPLQ8TBG4 499 aa9.51□□□□□ -0.89
PTPDC1-201ENST00000288976 SLC5A5Q92911 643 aa9.51□□□□□ -0.89
PTPDC1-201ENST00000288976 LENG9Q96B70 501 aa9.51□□□□□ -0.89
PTPDC1-201ENST00000288976 TAAR1Q96RJ0 339 aa9.51□□□□□ -0.89
PTPDC1-201ENST00000288976 NFASCO94856 1347 aa9.5□□□□□ -0.89
PTPDC1-201ENST00000288976 POTEB2H3BUK9 544 aa9.5□□□□□ -0.89
PTPDC1-201ENST00000288976 MEIS1O00470 390 aa9.5□□□□□ -0.89
PTPDC1-201ENST00000288976 CMA1P23946 247 aa9.5□□□□□ -0.89
PTPDC1-201ENST00000288976 MCM7P33993 719 aa9.5□□□□□ -0.89
PTPDC1-201ENST00000288976 CEP55Q53EZ4 464 aa9.5□□□□□ -0.89
PTPDC1-201ENST00000288976 OLFML2BQ68BL8 750 aa9.5□□□□□ -0.89
PTPDC1-201ENST00000288976 KCNV1Q6PIU1 500 aa9.5□□□□□ -0.89
PTPDC1-201ENST00000288976 MAMDC4Q6UXC1 1216 aa9.5□□□□□ -0.89
PTPDC1-201ENST00000288976 NSMFQ6X4W1 530 aa9.5□□□□□ -0.89
PTPDC1-201ENST00000288976 RAB34Q9BZG1 259 aa9.5□□□□□ -0.89
PTPDC1-201ENST00000288976 JADE2Q9NQC1 790 aa9.5□□□□□ -0.89
PTPDC1-201ENST00000288976 SMCHD1A6NHR9 2005 aa9.5□□□□□ -0.89
PTPDC1-201ENST00000288976 HOXC6P09630 235 aa9.5□□□□□ -0.89
PTPDC1-201ENST00000288976 PTGDRQ13258 359 aa9.5□□□□□ -0.89
PTPDC1-201ENST00000288976 ZNF174Q15697 407 aa9.5□□□□□ -0.89
PTPDC1-201ENST00000288976 TMEM266Q2M3C6 531 aa9.5□□□□□ -0.89
PTPDC1-201ENST00000288976 AXDND1Q5T1B0 1012 aaPredicted RBP9.5□□□□□ -0.89
PTPDC1-201ENST00000288976 VSIG10LQ86VR7 867 aa9.5□□□□□ -0.89
PTPDC1-201ENST00000288976 TBC1D5Q92609 795 aa9.5□□□□□ -0.89
PTPDC1-201ENST00000288976 USP6NLQ92738 828 aa9.5□□□□□ -0.89
PTPDC1-201ENST00000288976 USP25Q9UHP3 1055 aa9.5□□□□□ -0.89
PTPDC1-201ENST00000288976 PCDHA7Q9UN72 937 aa9.5□□□□□ -0.89
PTPDC1-201ENST00000288976 HSPA6P17066 643 aa9.5□□□□□ -0.89
PTPDC1-201ENST00000288976 MUTP22033 750 aa9.5□□□□□ -0.89
PTPDC1-201ENST00000288976 VEGFBP49765 207 aa9.5□□□□□ -0.89
PTPDC1-201ENST00000288976 PGBD1Q96JS3 809 aa9.5□□□□□ -0.89
PTPDC1-201ENST00000288976 NRBP1Q9UHY1 535 aa9.5□□□□□ -0.89
PTPDC1-201ENST00000288976 IVNS1ABPQ9Y6Y0 642 aa9.5□□□□□ -0.89
PTPDC1-201ENST00000288976 GOLGA4Q13439 2230 aaKnown RBP9.5□□□□□ -0.89
PTPDC1-201ENST00000288976 POTEDQ86YR6 584 aa9.49□□□□□ -0.89
PTPDC1-201ENST00000288976 INPP4AQ96PE3 977 aaPredicted RBP9.49□□□□□ -0.89
PTPDC1-201ENST00000288976 RIT2Q99578 217 aa9.49□□□□□ -0.89
PTPDC1-201ENST00000288976 WNT7AO00755 349 aa9.49□□□□□ -0.89
PTPDC1-201ENST00000288976 SLC37A4O43826 429 aa9.49□□□□□ -0.89
PTPDC1-201ENST00000288976 TDP2O95551 362 aa9.49□□□□□ -0.89
PTPDC1-201ENST00000288976 IGHA2P01877 340 aa9.49□□□□□ -0.89
PTPDC1-201ENST00000288976 FCGRTP55899 365 aa9.49□□□□□ -0.89
PTPDC1-201ENST00000288976 STXBP2Q15833 593 aa9.49□□□□□ -0.89
PTPDC1-201ENST00000288976 GNPTABQ3T906 1256 aa9.49□□□□□ -0.89
PTPDC1-201ENST00000288976 FCHSD1Q86WN1 690 aa9.49□□□□□ -0.89
PTPDC1-201ENST00000288976 IGSF22Q8N9C0 903 aa9.49□□□□□ -0.89
PTPDC1-201ENST00000288976 GIMAP8Q8ND71 665 aaPredicted RBP9.49□□□□□ -0.89
PTPDC1-201ENST00000288976 SENP7Q9BQF6 1050 aa9.49□□□□□ -0.89
PTPDC1-201ENST00000288976 FTOQ9C0B1 505 aaKnown RBP eCLIP9.49□□□□□ -0.89
PTPDC1-201ENST00000288976 PORCNQ9H237 461 aa9.49□□□□□ -0.89
PTPDC1-201ENST00000288976 TFIP11Q9UBB9 837 aaKnown RBP9.49□□□□□ -0.89
PTPDC1-201ENST00000288976 FAM86B1E9PN63 330 aa9.49□□□□□ -0.89
PTPDC1-201ENST00000288976 AOC2O75106 756 aa9.49□□□□□ -0.89
PTPDC1-201ENST00000288976 EIF3JO75822 258 aaKnown RBP9.49□□□□□ -0.89
PTPDC1-201ENST00000288976 FAM86B2P0C5J1 330 aa9.49□□□□□ -0.89
PTPDC1-201ENST00000288976 PPP2R5CQ13362 524 aa9.49□□□□□ -0.89
PTPDC1-201ENST00000288976 KLHL40Q2TBA0 621 aa9.49□□□□□ -0.89
PTPDC1-201ENST00000288976 DTHD1Q6ZMT9 781 aa9.49□□□□□ -0.89
PTPDC1-201ENST00000288976 RDM1Q8NG50 284 aa9.49□□□□□ -0.89
PTPDC1-201ENST00000288976 ZNF592Q92610 1267 aa9.49□□□□□ -0.89
PTPDC1-201ENST00000288976 FGD4Q96M96 766 aa9.49□□□□□ -0.89
PTPDC1-201ENST00000288976 SOWAHBA6NEL2 793 aa9.49□□□□□ -0.89
PTPDC1-201ENST00000288976 PRPF40AO75400 957 aaKnown RBP9.49□□□□□ -0.89
PTPDC1-201ENST00000288976 NR3C2P08235 984 aa9.49□□□□□ -0.89
PTPDC1-201ENST00000288976 ME1P48163 572 aa9.49□□□□□ -0.89
PTPDC1-201ENST00000288976 MRPS27Q92552 414 aaKnown RBP9.49□□□□□ -0.89
PTPDC1-201ENST00000288976 CCDC97Q96F63 343 aaPredicted RBP9.49□□□□□ -0.89
PTPDC1-201ENST00000288976 TBC1D22BQ9NU19 505 aa9.49□□□□□ -0.89
PTPDC1-201ENST00000288976 RNF186Q9NXI6 227 aa9.49□□□□□ -0.89
PTPDC1-201ENST00000288976 RBM47A0AV96 593 aaKnown RBP9.48□□□□□ -0.89
PTPDC1-201ENST00000288976 ADORA2AP29274 412 aa9.48□□□□□ -0.89
PTPDC1-201ENST00000288976 TIGD1Q96MW7 591 aa9.48□□□□□ -0.89
PTPDC1-201ENST00000288976 WDR11Q9BZH6 1224 aa9.48□□□□□ -0.89
PTPDC1-201ENST00000288976 MAGEF1Q9HAY2 307 aa9.48□□□□□ -0.89
PTPDC1-201ENST00000288976 AGO4Q9HCK5 861 aaKnown RBP9.48□□□□□ -0.89
PTPDC1-201ENST00000288976 VTA1Q9NP79 307 aa9.48□□□□□ -0.89
PTPDC1-201ENST00000288976 FAM13BQ9NYF5 915 aa9.48□□□□□ -0.89
PTPDC1-201ENST00000288976 CPA4Q9UI42 421 aa9.48□□□□□ -0.89
PTPDC1-201ENST00000288976 HPSEQ9Y251 543 aa9.48□□□□□ -0.89
PTPDC1-201ENST00000288976 RGS2P41220 211 aa9.48□□□□□ -0.89
PTPDC1-201ENST00000288976 MAP2K5Q13163 448 aa9.48□□□□□ -0.89
PTPDC1-201ENST00000288976 PLA2G4DQ86XP0 818 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms