RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 RTP1P59025 263 aa7.45□□□□□ -1.22
CD44-204ENST00000279452 PSMC6P62333 389 aa7.45□□□□□ -1.22
CD44-204ENST00000279452 ARHGAP4P98171 946 aa7.45□□□□□ -1.22
CD44-204ENST00000279452 GUCY1B3Q02153 619 aa7.45□□□□□ -1.22
CD44-204ENST00000279452 LRRC26Q2I0M4 334 aa7.45□□□□□ -1.22
CD44-204ENST00000279452 TRIM60Q495X7 471 aa7.45□□□□□ -1.22
CD44-204ENST00000279452 MCTP2Q6DN12 878 aa7.45□□□□□ -1.22
CD44-204ENST00000279452 XRRA1Q6P2D8 792 aa7.45□□□□□ -1.22
CD44-204ENST00000279452 UBE2Q1Q7Z7E8 422 aa7.45□□□□□ -1.22
CD44-204ENST00000279452 BLIDQ8IZY5 108 aa7.45□□□□□ -1.22
CD44-204ENST00000279452 AFG1LQ8WV93 481 aa7.45□□□□□ -1.22
CD44-204ENST00000279452 CDHR1Q96JP9 859 aa7.45□□□□□ -1.22
CD44-204ENST00000279452 SPATA33Q96N06 139 aa7.45□□□□□ -1.22
CD44-204ENST00000279452 UIMC1Q96RL1 719 aa7.45□□□□□ -1.22
CD44-204ENST00000279452 TSEN34Q9BSV6 310 aaKnown RBP7.45□□□□□ -1.22
CD44-204ENST00000279452 UPF3AQ9H1J1 476 aaKnown RBP7.45□□□□□ -1.22
CD44-204ENST00000279452 GJB4Q9NTQ9 266 aa7.45□□□□□ -1.22
CD44-204ENST00000279452 POLR3EQ9NVU0 708 aa7.45□□□□□ -1.22
CD44-204ENST00000279452 PRKAG2Q9UGJ0 569 aa7.45□□□□□ -1.22
CD44-204ENST00000279452 DDX41Q9UJV9 622 aaKnown RBP7.45□□□□□ -1.22
CD44-204ENST00000279452 Q9Y3F1 56 aa7.45□□□□□ -1.22
CD44-204ENST00000279452 NR2E3Q9Y5X4 410 aa7.45□□□□□ -1.22
CD44-204ENST00000279452 FRMPD3Q5JV73 1810 aa7.45□□□□□ -1.22
CD44-204ENST00000279452 A0A0U1RQG5 324 aaPredicted RBP7.44□□□□□ -1.22
CD44-204ENST00000279452 ADAMTS3O15072 1205 aa7.44□□□□□ -1.22
CD44-204ENST00000279452 RGS20O76081 388 aa7.44□□□□□ -1.22
CD44-204ENST00000279452 CD2BP2O95400 341 aaKnown RBP7.44□□□□□ -1.22
CD44-204ENST00000279452 MMP3P08254 477 aa7.44□□□□□ -1.22
CD44-204ENST00000279452 ZNF286BP0CG31 522 aa7.44□□□□□ -1.22
CD44-204ENST00000279452 COL6A1P12109 1028 aa7.44□□□□□ -1.22
CD44-204ENST00000279452 SYN1P17600 705 aa7.44□□□□□ -1.22
CD44-204ENST00000279452 CST5P28325 142 aaPredicted RBP7.44□□□□□ -1.22
CD44-204ENST00000279452 SREBF1P36956 1147 aa7.44□□□□□ -1.22
CD44-204ENST00000279452 MCM2P49736 904 aa7.44□□□□□ -1.22
CD44-204ENST00000279452 CLK2P49760 499 aaKnown RBP7.44□□□□□ -1.22
CD44-204ENST00000279452 HMGN5P82970 282 aaKnown RBP7.44□□□□□ -1.22
CD44-204ENST00000279452 ARHGAP1Q07960 439 aa7.44□□□□□ -1.22
CD44-204ENST00000279452 ST3GAL1Q11201 340 aa7.44□□□□□ -1.22
CD44-204ENST00000279452 LAMC2Q13753 1193 aa7.44□□□□□ -1.22
CD44-204ENST00000279452 NEDD9Q14511 834 aa7.44□□□□□ -1.22
CD44-204ENST00000279452 NONOQ15233 471 aaKnown RBP eCLIP7.44□□□□□ -1.22
CD44-204ENST00000279452 SAFBQ15424 915 aaKnown RBP eCLIP7.44□□□□□ -1.22
CD44-204ENST00000279452 PRR16Q569H4 304 aa7.44□□□□□ -1.22
CD44-204ENST00000279452 CELF3Q5SZQ8 465 aaKnown RBP7.44□□□□□ -1.22
CD44-204ENST00000279452 GALNT17Q6IS24 598 aa7.44□□□□□ -1.22
CD44-204ENST00000279452 CCDC62Q6P9F0 684 aa7.44□□□□□ -1.22
CD44-204ENST00000279452 SLC39A5Q6ZMH5 540 aa7.44□□□□□ -1.22
CD44-204ENST00000279452 PIK3AP1Q6ZUJ8 805 aa7.44□□□□□ -1.22
CD44-204ENST00000279452 CYFIP1Q7L576 1253 aa7.44□□□□□ -1.22
CD44-204ENST00000279452 KRT25Q7Z3Z0 450 aa7.44□□□□□ -1.22
CD44-204ENST00000279452 PLA2G4DQ86XP0 818 aa7.44□□□□□ -1.22
CD44-204ENST00000279452 TEX2Q8IWB9 1127 aa7.44□□□□□ -1.22
CD44-204ENST00000279452 KLHDC9Q8NEP7 349 aa7.44□□□□□ -1.22
CD44-204ENST00000279452 TBCKQ8TEA7 893 aa7.44□□□□□ -1.22
CD44-204ENST00000279452 PPP1R13LQ8WUF5 828 aa7.44□□□□□ -1.22
CD44-204ENST00000279452 GPRASP2Q96D09 838 aa7.44□□□□□ -1.22
CD44-204ENST00000279452 TMX3Q96JJ7 454 aa7.44□□□□□ -1.22
CD44-204ENST00000279452 C8orf76Q96K31 380 aa7.44□□□□□ -1.22
CD44-204ENST00000279452 INPP4AQ96PE3 977 aaPredicted RBP7.44□□□□□ -1.22
CD44-204ENST00000279452 MXRA8Q9BRK3 442 aa7.44□□□□□ -1.22
CD44-204ENST00000279452 SDF4Q9BRK5 362 aa7.44□□□□□ -1.22
CD44-204ENST00000279452 LLPHQ9BRT6 129 aaKnown RBP7.44□□□□□ -1.22
CD44-204ENST00000279452 MTG1Q9BT17 334 aaPredicted RBP7.44□□□□□ -1.22
CD44-204ENST00000279452 PHF20Q9BVI0 1012 aa7.44□□□□□ -1.22
CD44-204ENST00000279452 ZMYND8Q9ULU4 1186 aaPredicted RBP7.44□□□□□ -1.22
CD44-204ENST00000279452 KIF3AQ9Y496 699 aa7.44□□□□□ -1.22
CD44-204ENST00000279452 ZNFX1Q9P2E3 1918 aaKnown RBP7.44□□□□□ -1.22
CD44-204ENST00000279452 DCDC2CA8MYV0 355 aa7.43□□□□□ -1.22
CD44-204ENST00000279452 SPATA31C2B4DYI2 1134 aa7.43□□□□□ -1.22
CD44-204ENST00000279452 CTAGE5O15320 804 aa7.43□□□□□ -1.22
CD44-204ENST00000279452 TLR3O15455 904 aaKnown RBP7.43□□□□□ -1.22
CD44-204ENST00000279452 MARCH6O60337 910 aa7.43□□□□□ -1.22
CD44-204ENST00000279452 CABYRO75952 493 aa7.43□□□□□ -1.22
CD44-204ENST00000279452 TGFB3P10600 412 aa7.43□□□□□ -1.22
CD44-204ENST00000279452 FDPSP14324 419 aaKnown RBP7.43□□□□□ -1.22
CD44-204ENST00000279452 ITGB5P18084 799 aa7.43□□□□□ -1.22
CD44-204ENST00000279452 PURAQ00577 322 aaKnown RBP7.43□□□□□ -1.22
CD44-204ENST00000279452 SETQ01105 290 aaPredicted RBP7.43□□□□□ -1.22
CD44-204ENST00000279452 SP2Q02086 613 aa7.43□□□□□ -1.22
CD44-204ENST00000279452 ITGA7Q13683 1181 aa7.43□□□□□ -1.22
CD44-204ENST00000279452 DGKDQ16760 1214 aa7.43□□□□□ -1.22
CD44-204ENST00000279452 INF2Q27J81 1249 aa7.43□□□□□ -1.22
CD44-204ENST00000279452 LETM2Q2VYF4 491 aa7.43□□□□□ -1.22
CD44-204ENST00000279452 CEP55Q53EZ4 464 aa7.43□□□□□ -1.22
CD44-204ENST00000279452 UTP14CQ5TAP6 766 aaKnown RBP7.43□□□□□ -1.22
CD44-204ENST00000279452 KRT40Q6A162 431 aa7.43□□□□□ -1.22
CD44-204ENST00000279452 METTL7BQ6UX53 244 aa7.43□□□□□ -1.22
CD44-204ENST00000279452 DIS3L2Q8IYB7 885 aaKnown RBP7.43□□□□□ -1.22
CD44-204ENST00000279452 DAGLBQ8NCG7 672 aa7.43□□□□□ -1.22
CD44-204ENST00000279452 GIMAP8Q8ND71 665 aaPredicted RBP7.43□□□□□ -1.22
CD44-204ENST00000279452 PPTC7Q8NI37 304 aa7.43□□□□□ -1.22
CD44-204ENST00000279452 CYP2W1Q8TAV3 490 aa7.43□□□□□ -1.22
CD44-204ENST00000279452 OXER1Q8TDS5 423 aa7.43□□□□□ -1.22
CD44-204ENST00000279452 ZNF577Q9BSK1 485 aa7.43□□□□□ -1.22
CD44-204ENST00000279452 JADE2Q9NQC1 790 aa7.43□□□□□ -1.22
CD44-204ENST00000279452 KCNH7Q9NS40 1196 aa7.43□□□□□ -1.22
CD44-204ENST00000279452 FOXD4L1Q9NU39 408 aa7.43□□□□□ -1.22
CD44-204ENST00000279452 SMC3Q9UQE7 1217 aa7.43□□□□□ -1.22
CD44-204ENST00000279452 NOD1Q9Y239 953 aa7.43□□□□□ -1.22
CD44-204ENST00000279452 UBIAD1Q9Y5Z9 338 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms