RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 RMND1Q9NWS8 449 aa11.5□□□□□ -0.57
UPF3B-201ENST00000276201 REXO2Q9Y3B8 237 aaKnown RBP11.5□□□□□ -0.57
UPF3B-201ENST00000276201 ZHX2Q9Y6X8 837 aa11.5□□□□□ -0.57
UPF3B-201ENST00000276201 USP17L12C9JPN9 530 aa11.49□□□□□ -0.57
UPF3B-201ENST00000276201 USP17L21D6R901 530 aa11.49□□□□□ -0.57
UPF3B-201ENST00000276201 GTPBP6O43824 516 aaPredicted RBP11.49□□□□□ -0.57
UPF3B-201ENST00000276201 GDF11O95390 407 aa11.49□□□□□ -0.57
UPF3B-201ENST00000276201 EPB41P11171 864 aaKnown RBP11.49□□□□□ -0.57
UPF3B-201ENST00000276201 XBP1P17861 261 aa11.49□□□□□ -0.57
UPF3B-201ENST00000276201 GNAT2P19087 354 aa11.49□□□□□ -0.57
UPF3B-201ENST00000276201 SHMT1P34896 483 aa11.49□□□□□ -0.57
UPF3B-201ENST00000276201 KRT83P78385 493 aa11.49□□□□□ -0.57
UPF3B-201ENST00000276201 HSP90AA4PQ58FG1 418 aa11.49□□□□□ -0.57
UPF3B-201ENST00000276201 SPECC1Q5M775 1068 aa11.49□□□□□ -0.57
UPF3B-201ENST00000276201 TATDN1Q6P1N9 297 aa11.49□□□□□ -0.57
UPF3B-201ENST00000276201 GRAMD1CQ8IYS0 662 aa11.49□□□□□ -0.57
UPF3B-201ENST00000276201 PURBQ96QR8 312 aaKnown RBP11.49□□□□□ -0.57
UPF3B-201ENST00000276201 ZSWIM5Q9P217 1185 aa11.49□□□□□ -0.57
UPF3B-201ENST00000276201 SAR1BQ9Y6B6 198 aa11.49□□□□□ -0.57
UPF3B-201ENST00000276201 A0A087X0B3 334 aa11.49□□□□□ -0.57
UPF3B-201ENST00000276201 N4BP3O15049 544 aa11.49□□□□□ -0.57
UPF3B-201ENST00000276201 CETPP11597 493 aa11.49□□□□□ -0.57
UPF3B-201ENST00000276201 TNFRSF8P28908 595 aa11.49□□□□□ -0.57
UPF3B-201ENST00000276201 CDK17Q00537 523 aa11.49□□□□□ -0.57
UPF3B-201ENST00000276201 PPFIA1Q13136 1202 aa11.49□□□□□ -0.57
UPF3B-201ENST00000276201 MOGSQ13724 837 aa11.49□□□□□ -0.57
UPF3B-201ENST00000276201 E2F4Q16254 413 aa11.49□□□□□ -0.57
UPF3B-201ENST00000276201 TCP11X2Q5H9J9 407 aa11.49□□□□□ -0.57
UPF3B-201ENST00000276201 C12orf60Q5U649 245 aa11.49□□□□□ -0.57
UPF3B-201ENST00000276201 CCNI2Q6ZMN8 369 aaPredicted RBP11.49□□□□□ -0.57
UPF3B-201ENST00000276201 RPAINQ86UA6 219 aa11.49□□□□□ -0.57
UPF3B-201ENST00000276201 SPATS2Q86XZ4 545 aaKnown RBP11.49□□□□□ -0.57
UPF3B-201ENST00000276201 AMOTL1Q8IY63 956 aa11.49□□□□□ -0.57
UPF3B-201ENST00000276201 MMGT1Q8N4V1 131 aa11.49□□□□□ -0.57
UPF3B-201ENST00000276201 SLC44A5Q8NCS7 719 aa11.49□□□□□ -0.57
UPF3B-201ENST00000276201 OR8K1Q8NGG5 319 aa11.49□□□□□ -0.57
UPF3B-201ENST00000276201 IQCDQ96DY2 449 aa11.49□□□□□ -0.57
UPF3B-201ENST00000276201 SH3GL2Q99962 352 aa11.49□□□□□ -0.57
UPF3B-201ENST00000276201 AFG3L2Q9Y4W6 797 aa11.49□□□□□ -0.57
UPF3B-201ENST00000276201 GOLGA8KD6RF30 607 aa11.48□□□□□ -0.57
UPF3B-201ENST00000276201 PRLRP16471 622 aa11.48□□□□□ -0.57
UPF3B-201ENST00000276201 GUCY1A2P33402 732 aa11.48□□□□□ -0.57
UPF3B-201ENST00000276201 TRAPPC10P48553 1259 aa11.48□□□□□ -0.57
UPF3B-201ENST00000276201 ZNF658Q5TYW1 1059 aaPredicted RBP11.48□□□□□ -0.57
UPF3B-201ENST00000276201 CCDC170Q8IYT3 715 aa11.48□□□□□ -0.57
UPF3B-201ENST00000276201 IFNL3Q8IZI9 196 aa11.48□□□□□ -0.57
UPF3B-201ENST00000276201 RETREG2Q8NC44 543 aa11.48□□□□□ -0.57
UPF3B-201ENST00000276201 AENQ8WTP8 325 aaKnown RBP11.48□□□□□ -0.57
UPF3B-201ENST00000276201 NOC3LQ8WTT2 800 aaKnown RBP11.48□□□□□ -0.57
UPF3B-201ENST00000276201 DYNLL2Q96FJ2 89 aa11.48□□□□□ -0.57
UPF3B-201ENST00000276201 NCAPGQ9BPX3 1015 aa11.48□□□□□ -0.57
UPF3B-201ENST00000276201 PHF20Q9BVI0 1012 aa11.48□□□□□ -0.57
UPF3B-201ENST00000276201 ZBTB21Q9ULJ3 1066 aa11.48□□□□□ -0.57
UPF3B-201ENST00000276201 CAPN11Q9UMQ6 739 aa11.48□□□□□ -0.57
UPF3B-201ENST00000276201 PTPRFP10586 1907 aa11.48□□□□□ -0.57
UPF3B-201ENST00000276201 CXCL11O14625 94 aa11.48□□□□□ -0.57
UPF3B-201ENST00000276201 RXRAP19793 462 aa11.48□□□□□ -0.57
UPF3B-201ENST00000276201 EEF1GP26641 437 aaKnown RBP11.48□□□□□ -0.57
UPF3B-201ENST00000276201 KRT9P35527 623 aa11.48□□□□□ -0.57
UPF3B-201ENST00000276201 SKOR1P84550 965 aa11.48□□□□□ -0.57
UPF3B-201ENST00000276201 PAK1Q13153 545 aa11.48□□□□□ -0.57
UPF3B-201ENST00000276201 WTAPQ15007 396 aa11.48□□□□□ -0.57
UPF3B-201ENST00000276201 POTEDQ86YR6 584 aa11.48□□□□□ -0.57
UPF3B-201ENST00000276201 FAM76AQ8TAV0 307 aa11.48□□□□□ -0.57
UPF3B-201ENST00000276201 CPLX3Q8WVH0 158 aa11.48□□□□□ -0.57
UPF3B-201ENST00000276201 TNFRSF25Q93038 417 aa11.48□□□□□ -0.57
UPF3B-201ENST00000276201 PAGR1Q9BTK6 254 aa11.48□□□□□ -0.57
UPF3B-201ENST00000276201 R3HDMLQ9H3Y0 253 aa11.48□□□□□ -0.57
UPF3B-201ENST00000276201 RNF41Q9H4P4 317 aaPredicted RBP11.48□□□□□ -0.57
UPF3B-201ENST00000276201 ARPP21Q9UBL0 812 aaPredicted RBP11.48□□□□□ -0.57
UPF3B-201ENST00000276201 KCNJ14Q9UNX9 436 aa11.48□□□□□ -0.57
UPF3B-201ENST00000276201 USP17L5A8MUK1 530 aa11.47□□□□□ -0.57
UPF3B-201ENST00000276201 LGALS16A8MUM7 142 aa11.47□□□□□ -0.57
UPF3B-201ENST00000276201 KCNJ18B7U540 433 aa11.47□□□□□ -0.57
UPF3B-201ENST00000276201 BTBD19C9JJ37 291 aa11.47□□□□□ -0.57
UPF3B-201ENST00000276201 PRPF3O43395 683 aaKnown RBP11.47□□□□□ -0.57
UPF3B-201ENST00000276201 ALDH1A1P00352 501 aa11.47□□□□□ -0.57
UPF3B-201ENST00000276201 ASNSP08243 561 aa11.47□□□□□ -0.57
UPF3B-201ENST00000276201 KRT2P35908 639 aa11.47□□□□□ -0.57
UPF3B-201ENST00000276201 ATP2C1P98194 919 aaPredicted RBP11.47□□□□□ -0.57
UPF3B-201ENST00000276201 KCNJ12Q14500 433 aa11.47□□□□□ -0.57
UPF3B-201ENST00000276201 CERKLQ49MI3 558 aaPredicted RBP11.47□□□□□ -0.57
UPF3B-201ENST00000276201 SBK1Q52WX2 424 aa11.47□□□□□ -0.57
UPF3B-201ENST00000276201 EMC10Q5UCC4 262 aa11.47□□□□□ -0.57
UPF3B-201ENST00000276201 WWC2Q6AWC2 1192 aa11.47□□□□□ -0.57
UPF3B-201ENST00000276201 MCTP2Q6DN12 878 aa11.47□□□□□ -0.57
UPF3B-201ENST00000276201 PDXDC2PQ6P474 469 aa11.47□□□□□ -0.57
UPF3B-201ENST00000276201 USP49Q70CQ1 688 aa11.47□□□□□ -0.57
UPF3B-201ENST00000276201 ZNF507Q8TCN5 953 aa11.47□□□□□ -0.57
UPF3B-201ENST00000276201 SYMPKQ92797 1274 aaKnown RBP11.47□□□□□ -0.57
UPF3B-201ENST00000276201 NUP58Q9BVL2 599 aa11.47□□□□□ -0.57
UPF3B-201ENST00000276201 CFHR5Q9BXR6 569 aa11.47□□□□□ -0.57
UPF3B-201ENST00000276201 DEF6Q9H4E7 631 aa11.47□□□□□ -0.57
UPF3B-201ENST00000276201 THAP9Q9H5L6 903 aa11.47□□□□□ -0.57
UPF3B-201ENST00000276201 FAM184BQ9ULE4 1060 aa11.47□□□□□ -0.57
UPF3B-201ENST00000276201 CTNND2Q9UQB3 1225 aa11.47□□□□□ -0.57
UPF3B-201ENST00000276201 A0A0G2JLL6 359 aaPredicted RBP11.47□□□□□ -0.57
UPF3B-201ENST00000276201 SRRM3A6NNA2 597 aaPredicted RBP11.47□□□□□ -0.57
UPF3B-201ENST00000276201 AGPSO00116 658 aa11.47□□□□□ -0.57
UPF3B-201ENST00000276201 GH2P01242 217 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms