RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 NXPE3Q969Y0 559 aa11.89□□□□□ -0.51
LRTM1-201ENST00000273286 ARHGAP39Q9C0H5 1083 aa11.89□□□□□ -0.51
LRTM1-201ENST00000273286 ABCF2Q9UG63 623 aa11.89□□□□□ -0.51
LRTM1-201ENST00000273286 ADGRA2Q96PE1 1338 aa11.89□□□□□ -0.51
LRTM1-201ENST00000273286 RFX7Q2KHR2 1363 aa11.89□□□□□ -0.51
LRTM1-201ENST00000273286 A0A0G2JLL6 359 aaPredicted RBP11.88□□□□□ -0.51
LRTM1-201ENST00000273286 RARSP54136 660 aaKnown RBP11.88□□□□□ -0.51
LRTM1-201ENST00000273286 UBXN2AP68543 259 aa11.88□□□□□ -0.51
LRTM1-201ENST00000273286 GSTO1P78417 241 aa11.88□□□□□ -0.51
LRTM1-201ENST00000273286 MOGSQ13724 837 aa11.88□□□□□ -0.51
LRTM1-201ENST00000273286 B4GALNT3Q6L9W6 998 aa11.88□□□□□ -0.51
LRTM1-201ENST00000273286 ERICH6Q7L0X2 663 aa11.88□□□□□ -0.51
LRTM1-201ENST00000273286 PRRT2Q7Z6L0 340 aaPredicted RBP11.88□□□□□ -0.51
LRTM1-201ENST00000273286 MEIS3Q99687 375 aa11.88□□□□□ -0.51
LRTM1-201ENST00000273286 STOML1Q9UBI4 398 aa11.88□□□□□ -0.51
LRTM1-201ENST00000273286 PA2G4Q9UQ80 394 aaKnown RBP11.88□□□□□ -0.51
LRTM1-201ENST00000273286 ZHX2Q9Y6X8 837 aa11.88□□□□□ -0.51
LRTM1-201ENST00000273286 MROH7-TTC4A0A0A0MT08 1334 aa11.88□□□□□ -0.51
LRTM1-201ENST00000273286 MYPNQ86TC9 1320 aa11.88□□□□□ -0.51
LRTM1-201ENST00000273286 COL2A1P02458 1487 aaPredicted RBP11.88□□□□□ -0.51
LRTM1-201ENST00000273286 CEP290O15078 2479 aa11.87□□□□□ -0.51
LRTM1-201ENST00000273286 GPR75-ASB3A0A0A6YYF3 556 aa11.87□□□□□ -0.51
LRTM1-201ENST00000273286 CCER2I3L3R5 266 aa11.87□□□□□ -0.51
LRTM1-201ENST00000273286 BTDP43251 543 aa11.87□□□□□ -0.51
LRTM1-201ENST00000273286 ARL4DP49703 201 aa11.87□□□□□ -0.51
LRTM1-201ENST00000273286 HGSNATQ68CP4 663 aa11.87□□□□□ -0.51
LRTM1-201ENST00000273286 BSNDQ8WZ55 320 aa11.87□□□□□ -0.51
LRTM1-201ENST00000273286 FAM46AQ96IP4 442 aaKnown RBP11.87□□□□□ -0.51
LRTM1-201ENST00000273286 HTATIP2Q9BUP3 242 aa11.87□□□□□ -0.51
LRTM1-201ENST00000273286 AFG3L2Q9Y4W6 797 aa11.87□□□□□ -0.51
LRTM1-201ENST00000273286 GJB1P08034 283 aa11.86□□□□□ -0.51
LRTM1-201ENST00000273286 ADORA1P30542 326 aa11.86□□□□□ -0.51
LRTM1-201ENST00000273286 GJA8P48165 433 aa11.86□□□□□ -0.51
LRTM1-201ENST00000273286 TIMM10P62072 90 aa11.86□□□□□ -0.51
LRTM1-201ENST00000273286 C19orf57Q0VDD7 668 aa11.86□□□□□ -0.51
LRTM1-201ENST00000273286 GORABQ5T7V8 394 aa11.86□□□□□ -0.51
LRTM1-201ENST00000273286 ASAP3Q8TDY4 903 aa11.86□□□□□ -0.51
LRTM1-201ENST00000273286 SMCR8Q8TEV9 937 aaPredicted RBP11.86□□□□□ -0.51
LRTM1-201ENST00000273286 OSBPL5Q9H0X9 879 aaPredicted RBP11.86□□□□□ -0.51
LRTM1-201ENST00000273286 LATS2Q9NRM7 1088 aa11.86□□□□□ -0.51
LRTM1-201ENST00000273286 GNAI2P04899 355 aa11.86□□□□□ -0.51
LRTM1-201ENST00000273286 MECOMQ03112 1051 aa11.86□□□□□ -0.51
LRTM1-201ENST00000273286 TFCP2Q12800 502 aa11.86□□□□□ -0.51
LRTM1-201ENST00000273286 PABPC4Q13310 644 aaKnown RBP eCLIP11.86□□□□□ -0.51
LRTM1-201ENST00000273286 SPATA5Q8NB90 893 aa11.86□□□□□ -0.51
LRTM1-201ENST00000273286 RUSC1Q9BVN2 902 aa11.86□□□□□ -0.51
LRTM1-201ENST00000273286 RNF208Q9H0X6 261 aa11.86□□□□□ -0.51
LRTM1-201ENST00000273286 BIN2Q9UBW5 565 aaPredicted RBP11.86□□□□□ -0.51
LRTM1-201ENST00000273286 AGTPBP1Q9UPW5 1226 aa11.86□□□□□ -0.51
LRTM1-201ENST00000273286 DOCK1Q14185 1865 aa11.85□□□□□ -0.51
LRTM1-201ENST00000273286 DDTLA6NHG4 134 aaPredicted RBP11.85□□□□□ -0.51
LRTM1-201ENST00000273286 H3BRB1 525 aa11.85□□□□□ -0.51
LRTM1-201ENST00000273286 GSC2O15499 205 aa11.85□□□□□ -0.51
LRTM1-201ENST00000273286 IGLV1-40P01703 118 aa11.85□□□□□ -0.51
LRTM1-201ENST00000273286 UQCRFS1P1P0C7P4 283 aa11.85□□□□□ -0.51
LRTM1-201ENST00000273286 CYP2C8P10632 490 aa11.85□□□□□ -0.51
LRTM1-201ENST00000273286 G3BP1Q13283 466 aaKnown RBP eCLIP11.85□□□□□ -0.51
LRTM1-201ENST00000273286 PICALMQ13492 652 aa11.85□□□□□ -0.51
LRTM1-201ENST00000273286 IKBKEQ14164 716 aa11.85□□□□□ -0.51
LRTM1-201ENST00000273286 GADL1Q6ZQY3 521 aa11.85□□□□□ -0.51
LRTM1-201ENST00000273286 VN1R5Q7Z5H4 357 aa11.85□□□□□ -0.51
LRTM1-201ENST00000273286 ZFPM1Q8IX07 1006 aa11.85□□□□□ -0.51
LRTM1-201ENST00000273286 NEUROD6Q96NK8 337 aa11.85□□□□□ -0.51
LRTM1-201ENST00000273286 NOL10Q9BSC4 688 aaKnown RBP11.85□□□□□ -0.51
LRTM1-201ENST00000273286 DHX36Q9H2U1 1008 aaKnown RBP11.85□□□□□ -0.51
LRTM1-201ENST00000273286 TUT1Q9H6E5 874 aaKnown RBP11.85□□□□□ -0.51
LRTM1-201ENST00000273286 EGFL7Q9UHF1 273 aa11.85□□□□□ -0.51
LRTM1-201ENST00000273286 HERC5Q9UII4 1024 aaKnown RBP11.85□□□□□ -0.51
LRTM1-201ENST00000273286 ZSWIM8A7E2V4 1837 aa11.84□□□□□ -0.51
LRTM1-201ENST00000273286 TNPO2O14787 897 aaKnown RBP11.84□□□□□ -0.51
LRTM1-201ENST00000273286 SART1O43290 800 aaKnown RBP11.84□□□□□ -0.51
LRTM1-201ENST00000273286 ICMTO60725 284 aa11.84□□□□□ -0.51
LRTM1-201ENST00000273286 CCL5P13501 91 aa11.84□□□□□ -0.51
LRTM1-201ENST00000273286 CTGFP29279 349 aa11.84□□□□□ -0.51
LRTM1-201ENST00000273286 SERPINB4P48594 390 aa11.84□□□□□ -0.51
LRTM1-201ENST00000273286 RHBDL3P58872 404 aa11.84□□□□□ -0.51
LRTM1-201ENST00000273286 PRKCZQ05513 592 aa11.84□□□□□ -0.51
LRTM1-201ENST00000273286 PEAR1Q5VY43 1037 aaPredicted RBP11.84□□□□□ -0.51
LRTM1-201ENST00000273286 ANKRD34AQ69YU3 496 aa11.84□□□□□ -0.51
LRTM1-201ENST00000273286 ATF7IPQ6VMQ6 1270 aa11.84□□□□□ -0.51
LRTM1-201ENST00000273286 NSUN4Q96CB9 384 aaKnown RBP11.84□□□□□ -0.51
LRTM1-201ENST00000273286 MYRFLQ96LU7 910 aa11.84□□□□□ -0.51
LRTM1-201ENST00000273286 BHLHE41Q9C0J9 482 aaPredicted RBP11.84□□□□□ -0.51
LRTM1-201ENST00000273286 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.84□□□□□ -0.51
LRTM1-201ENST00000273286 GPR108Q9NPR9 543 aa11.84□□□□□ -0.51
LRTM1-201ENST00000273286 DDX4Q9NQI0 724 aaKnown RBP11.84□□□□□ -0.51
LRTM1-201ENST00000273286 HMG20BQ9P0W2 317 aa11.84□□□□□ -0.51
LRTM1-201ENST00000273286 PTPRFP10586 1907 aa11.83□□□□□ -0.51
LRTM1-201ENST00000273286 TRIM75PA6NK02 468 aa11.83□□□□□ -0.52
LRTM1-201ENST00000273286 BAG3O95817 575 aa11.83□□□□□ -0.52
LRTM1-201ENST00000273286 TRIM27P14373 513 aa11.83□□□□□ -0.52
LRTM1-201ENST00000273286 PREPP48147 710 aa11.83□□□□□ -0.52
LRTM1-201ENST00000273286 GCLCP48506 637 aaPredicted RBP11.83□□□□□ -0.52
LRTM1-201ENST00000273286 FAM110CQ1W6H9 321 aa11.83□□□□□ -0.52
LRTM1-201ENST00000273286 COA7Q96BR5 231 aa11.83□□□□□ -0.52
LRTM1-201ENST00000273286 AS3MTQ9HBK9 375 aa11.83□□□□□ -0.52
LRTM1-201ENST00000273286 RAI14Q9P0K7 980 aa11.83□□□□□ -0.52
LRTM1-201ENST00000273286 LRP2BPQ9P2M1 347 aa11.83□□□□□ -0.52
LRTM1-201ENST00000273286 NR2E3Q9Y5X4 410 aa11.83□□□□□ -0.52
LRTM1-201ENST00000273286 MGAMO43451 1857 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms