RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 FBXO2Q9UK22 296 aaPredicted RBP17.29■□□□□ 0.36
CTDSP1-201ENST00000273062 TAF1P21675 1872 aa17.29■□□□□ 0.36
CTDSP1-201ENST00000273062 ZNF263O14978 683 aa17.29■□□□□ 0.36
CTDSP1-201ENST00000273062 MOCS3O95396 460 aa17.29■□□□□ 0.36
CTDSP1-201ENST00000273062 UQCRFS1P1P0C7P4 283 aa17.29■□□□□ 0.36
CTDSP1-201ENST00000273062 IGHMBP2P38935 993 aaKnown RBP17.29■□□□□ 0.36
CTDSP1-201ENST00000273062 MXRA7P84157 204 aa17.29■□□□□ 0.36
CTDSP1-201ENST00000273062 ZBED6P86452 979 aa17.29■□□□□ 0.36
CTDSP1-201ENST00000273062 UBE3CQ15386 1083 aa17.29■□□□□ 0.36
CTDSP1-201ENST00000273062 CYB5R4Q7L1T6 521 aa17.29■□□□□ 0.36
CTDSP1-201ENST00000273062 TAX1BP1Q86VP1 789 aa17.29■□□□□ 0.36
CTDSP1-201ENST00000273062 KIF2BQ8N4N8 673 aa17.29■□□□□ 0.36
CTDSP1-201ENST00000273062 ARMT1Q9H993 441 aa17.29■□□□□ 0.36
CTDSP1-201ENST00000273062 GDF3Q9NR23 364 aa17.29■□□□□ 0.36
CTDSP1-201ENST00000273062 LRWD1Q9UFC0 647 aa17.29■□□□□ 0.36
CTDSP1-201ENST00000273062 PDHA1P08559 390 aa17.28■□□□□ 0.36
CTDSP1-201ENST00000273062 TOB1P50616 345 aaPredicted RBP17.28■□□□□ 0.36
CTDSP1-201ENST00000273062 ADAM9Q13443 819 aa17.28■□□□□ 0.36
CTDSP1-201ENST00000273062 TAF11Q15544 211 aa17.28■□□□□ 0.36
CTDSP1-201ENST00000273062 AMIGO3Q86WK7 504 aa17.28■□□□□ 0.36
CTDSP1-201ENST00000273062 NCOA7Q8NI08 942 aa17.28■□□□□ 0.36
CTDSP1-201ENST00000273062 EPB41L4AQ9HCS5 686 aaPredicted RBP17.28■□□□□ 0.36
CTDSP1-201ENST00000273062 UBAP1LF5GYI3 381 aa17.28■□□□□ 0.36
CTDSP1-201ENST00000273062 PRKAB2O43741 272 aa17.28■□□□□ 0.36
CTDSP1-201ENST00000273062 MYL1P05976 194 aa17.28■□□□□ 0.36
CTDSP1-201ENST00000273062 TPP2P29144 1249 aaPredicted RBP17.28■□□□□ 0.36
CTDSP1-201ENST00000273062 RALYLQ86SE5 291 aaKnown RBP17.28■□□□□ 0.36
CTDSP1-201ENST00000273062 ELOA2Q8IYF1 753 aaPredicted RBP17.28■□□□□ 0.36
CTDSP1-201ENST00000273062 RUBCNQ92622 972 aa17.28■□□□□ 0.36
CTDSP1-201ENST00000273062 NAF1Q96HR8 494 aaKnown RBP17.28■□□□□ 0.36
CTDSP1-201ENST00000273062 DNAJC7Q99615 494 aa17.28■□□□□ 0.36
CTDSP1-201ENST00000273062 AGPAT5Q9NUQ2 364 aa17.28■□□□□ 0.36
CTDSP1-201ENST00000273062 LIMA1Q9UHB6 759 aaKnown RBP17.28■□□□□ 0.36
CTDSP1-201ENST00000273062 SRP68Q9UHB9 627 aaKnown RBP17.28■□□□□ 0.36
CTDSP1-201ENST00000273062 TACC3Q9Y6A5 838 aa17.28■□□□□ 0.36
CTDSP1-201ENST00000273062 ATRNO75882 1429 aa17.27■□□□□ 0.36
CTDSP1-201ENST00000273062 STXBP3O00186 592 aa17.27■□□□□ 0.36
CTDSP1-201ENST00000273062 SH2B2O14492 632 aaPredicted RBP17.27■□□□□ 0.36
CTDSP1-201ENST00000273062 MBD4O95243 580 aa17.27■□□□□ 0.36
CTDSP1-201ENST00000273062 FMNL1O95466 1100 aaPredicted RBP17.27■□□□□ 0.36
CTDSP1-201ENST00000273062 ABCD1P33897 745 aa17.27■□□□□ 0.36
CTDSP1-201ENST00000273062 UAP1Q16222 522 aaPredicted RBP17.27■□□□□ 0.36
CTDSP1-201ENST00000273062 ODF2Q5BJF6 829 aa17.27■□□□□ 0.36
CTDSP1-201ENST00000273062 TBC1D9BQ66K14 1250 aa17.27■□□□□ 0.36
CTDSP1-201ENST00000273062 STRBPQ96SI9 672 aaKnown RBP17.27■□□□□ 0.36
CTDSP1-201ENST00000273062 GOPCQ9HD26 462 aa17.27■□□□□ 0.36
CTDSP1-201ENST00000273062 ABCF3Q9NUQ8 709 aa17.27■□□□□ 0.36
CTDSP1-201ENST00000273062 VPS54Q9P1Q0 977 aa17.27■□□□□ 0.36
CTDSP1-201ENST00000273062 WDR35Q9P2L0 1181 aa17.27■□□□□ 0.36
CTDSP1-201ENST00000273062 COL5A3P25940 1745 aaPredicted RBP17.27■□□□□ 0.35
CTDSP1-201ENST00000273062 GPR75-ASB3A0A0A6YYF3 556 aa17.27■□□□□ 0.35
CTDSP1-201ENST00000273062 GCOM1H8Y6P7 765 aaPredicted RBP17.27■□□□□ 0.35
CTDSP1-201ENST00000273062 MYZAPP0CAP1 466 aa17.27■□□□□ 0.35
CTDSP1-201ENST00000273062 DNA2P51530 1060 aa17.27■□□□□ 0.35
CTDSP1-201ENST00000273062 ITIH3Q06033 890 aa17.27■□□□□ 0.35
CTDSP1-201ENST00000273062 ZNF844Q08AG5 666 aa17.27■□□□□ 0.35
CTDSP1-201ENST00000273062 RNF220Q5VTB9 566 aa17.27■□□□□ 0.35
CTDSP1-201ENST00000273062 MREGQ8N565 214 aa17.27■□□□□ 0.35
CTDSP1-201ENST00000273062 PHC3Q8NDX5 983 aa17.27■□□□□ 0.35
CTDSP1-201ENST00000273062 MTFR1LQ9H019 292 aa17.27■□□□□ 0.35
CTDSP1-201ENST00000273062 LUC7L2Q9Y383 392 aaKnown RBP17.27■□□□□ 0.35
CTDSP1-201ENST00000273062 ASB3Q9Y575 518 aa17.27■□□□□ 0.35
CTDSP1-201ENST00000273062 ARAP2Q8WZ64 1704 aa17.26■□□□□ 0.35
CTDSP1-201ENST00000273062 B4E1Z4 1266 aa17.26■□□□□ 0.35
CTDSP1-201ENST00000273062 H0YGN5 161 aa17.26■□□□□ 0.35
CTDSP1-201ENST00000273062 IFT20Q8IY31 132 aa17.26■□□□□ 0.35
CTDSP1-201ENST00000273062 ARFGAP2Q8N6H7 521 aa17.26■□□□□ 0.35
CTDSP1-201ENST00000273062 MIGA1Q8NAN2 632 aa17.26■□□□□ 0.35
CTDSP1-201ENST00000273062 P3H4Q92791 437 aa17.26■□□□□ 0.35
CTDSP1-201ENST00000273062 NHEJ1Q9H9Q4 299 aaPredicted RBP17.26■□□□□ 0.35
CTDSP1-201ENST00000273062 ZMYND8Q9ULU4 1186 aaPredicted RBP17.26■□□□□ 0.35
CTDSP1-201ENST00000273062 CEP131Q9UPN4 1083 aa17.26■□□□□ 0.35
CTDSP1-201ENST00000273062 NFS1Q9Y697 457 aa17.26■□□□□ 0.35
CTDSP1-201ENST00000273062 LRRC10BA6NIK2 292 aa17.26■□□□□ 0.35
CTDSP1-201ENST00000273062 RASSF10A6NK89 507 aa17.26■□□□□ 0.35
CTDSP1-201ENST00000273062 ORC4O43929 436 aa17.26■□□□□ 0.35
CTDSP1-201ENST00000273062 PLEKP08567 350 aaPredicted RBP17.26■□□□□ 0.35
CTDSP1-201ENST00000273062 NQO1P15559 274 aaKnown RBP17.26■□□□□ 0.35
CTDSP1-201ENST00000273062 GYG1P46976 350 aa17.26■□□□□ 0.35
CTDSP1-201ENST00000273062 KLK7P49862 253 aa17.26■□□□□ 0.35
CTDSP1-201ENST00000273062 KRT83P78385 493 aa17.26■□□□□ 0.35
CTDSP1-201ENST00000273062 CTDSPL2Q05D32 466 aa17.26■□□□□ 0.35
CTDSP1-201ENST00000273062 LRRC23Q53EV4 343 aaPredicted RBP17.26■□□□□ 0.35
CTDSP1-201ENST00000273062 TCP11X2Q5H9J9 407 aa17.26■□□□□ 0.35
CTDSP1-201ENST00000273062 RRP12Q5JTH9 1297 aaKnown RBP17.26■□□□□ 0.35
CTDSP1-201ENST00000273062 KIAA0825Q8IV33 1275 aa17.26■□□□□ 0.35
CTDSP1-201ENST00000273062 RBM12BQ8IXT5 1001 aaKnown RBP17.26■□□□□ 0.35
CTDSP1-201ENST00000273062 SYCP3Q8IZU3 236 aa17.26■□□□□ 0.35
CTDSP1-201ENST00000273062 CCDC197Q8NCU1 140 aa17.26■□□□□ 0.35
CTDSP1-201ENST00000273062 ZFAND2BQ8WV99 257 aa17.26■□□□□ 0.35
CTDSP1-201ENST00000273062 NOVA2Q9UNW9 492 aaKnown RBP17.26■□□□□ 0.35
CTDSP1-201ENST00000273062 MAPK8IP1Q9UQF2 711 aa17.26■□□□□ 0.35
CTDSP1-201ENST00000273062 GOLGA6L10A6NI86 522 aa17.25■□□□□ 0.35
CTDSP1-201ENST00000273062 KCNJ18B7U540 433 aa17.25■□□□□ 0.35
CTDSP1-201ENST00000273062 SEMA3EO15041 775 aa17.25■□□□□ 0.35
CTDSP1-201ENST00000273062 KRT16P08779 473 aa17.25■□□□□ 0.35
CTDSP1-201ENST00000273062 HSD17B3P37058 310 aa17.25■□□□□ 0.35
CTDSP1-201ENST00000273062 PPP2R2AP63151 447 aa17.25■□□□□ 0.35
CTDSP1-201ENST00000273062 CUL3Q13618 768 aa17.25■□□□□ 0.35
CTDSP1-201ENST00000273062 KCNJ12Q14500 433 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms