RNA–Protein interactions for RNA: ENST00000271971.6

CAPN9-201, Transcript of calpain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN9, Length 2,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-201ENST00000271971 AP5Z1O43299 807 aa14.05□□□□□ -0.16
CAPN9-201ENST00000271971 ADCY5O95622 1261 aa14.05□□□□□ -0.16
CAPN9-201ENST00000271971 SPIRE1Q08AE8 756 aa14.05□□□□□ -0.16
CAPN9-201ENST00000271971 PDIA5Q14554 519 aa14.05□□□□□ -0.16
CAPN9-201ENST00000271971 CEP55Q53EZ4 464 aa14.05□□□□□ -0.16
CAPN9-201ENST00000271971 NT5DC1Q5TFE4 455 aa14.05□□□□□ -0.16
CAPN9-201ENST00000271971 PLA2G4DQ86XP0 818 aa14.05□□□□□ -0.16
CAPN9-201ENST00000271971 DHX40Q8IX18 779 aaKnown RBP14.05□□□□□ -0.16
CAPN9-201ENST00000271971 SLFN12Q8IYM2 578 aa14.05□□□□□ -0.16
CAPN9-201ENST00000271971 SPATA20Q8TB22 786 aa14.05□□□□□ -0.16
CAPN9-201ENST00000271971 CALML4Q96GE6 196 aa14.05□□□□□ -0.16
CAPN9-201ENST00000271971 CCDC34Q96HJ3 373 aa14.05□□□□□ -0.16
CAPN9-201ENST00000271971 PAGR1Q9BTK6 254 aa14.05□□□□□ -0.16
CAPN9-201ENST00000271971 TRPM7Q96QT4 1865 aa14.05□□□□□ -0.16
CAPN9-201ENST00000271971 ATP2A1O14983 1001 aa14.05□□□□□ -0.16
CAPN9-201ENST00000271971 HOXA7P31268 230 aaPredicted RBP14.05□□□□□ -0.16
CAPN9-201ENST00000271971 DHX8Q14562 1220 aaKnown RBP14.05□□□□□ -0.16
CAPN9-201ENST00000271971 KRT79Q5XKE5 535 aa14.05□□□□□ -0.16
CAPN9-201ENST00000271971 NCAPH2Q6IBW4 605 aa14.05□□□□□ -0.16
CAPN9-201ENST00000271971 LBX2Q6XYB7 198 aa14.05□□□□□ -0.16
CAPN9-201ENST00000271971 KCNK18Q7Z418 384 aa14.05□□□□□ -0.16
CAPN9-201ENST00000271971 GBA2Q9HCG7 927 aaPredicted RBP14.05□□□□□ -0.16
CAPN9-201ENST00000271971 ARP10275 920 aa14.04□□□□□ -0.16
CAPN9-201ENST00000271971 ITGB5P18084 799 aa14.04□□□□□ -0.16
CAPN9-201ENST00000271971 HERVK_113P62684 666 aa14.04□□□□□ -0.16
CAPN9-201ENST00000271971 CDK5RAP3Q96JB5 506 aa14.04□□□□□ -0.16
CAPN9-201ENST00000271971 RMDN3Q96TC7 470 aa14.04□□□□□ -0.16
CAPN9-201ENST00000271971 ACAD9Q9H845 621 aa14.04□□□□□ -0.16
CAPN9-201ENST00000271971 A1CFQ9NQ94 594 aaKnown RBP14.04□□□□□ -0.16
CAPN9-201ENST00000271971 PKD2L1Q9P0L9 805 aa14.04□□□□□ -0.16
CAPN9-201ENST00000271971 VAV3Q9UKW4 847 aa14.04□□□□□ -0.16
CAPN9-201ENST00000271971 PNMA2Q9UL42 364 aa14.04□□□□□ -0.16
CAPN9-201ENST00000271971 DOCK5Q9H7D0 1870 aa14.04□□□□□ -0.16
CAPN9-201ENST00000271971 TBX3O15119 743 aa14.04□□□□□ -0.16
CAPN9-201ENST00000271971 GTPBP6O43824 516 aaPredicted RBP14.04□□□□□ -0.16
CAPN9-201ENST00000271971 SMC2O95347 1197 aa14.04□□□□□ -0.16
CAPN9-201ENST00000271971 MRPS9P82933 396 aaKnown RBP14.04□□□□□ -0.16
CAPN9-201ENST00000271971 MORC3Q14149 939 aa14.04□□□□□ -0.16
CAPN9-201ENST00000271971 GPAT2Q6NUI2 795 aa14.04□□□□□ -0.16
CAPN9-201ENST00000271971 SMYD4Q8IYR2 804 aaPredicted RBP14.04□□□□□ -0.16
CAPN9-201ENST00000271971 R3HDMLQ9H3Y0 253 aa14.04□□□□□ -0.16
CAPN9-201ENST00000271971 PXMP2Q9NR77 195 aa14.04□□□□□ -0.16
CAPN9-201ENST00000271971 BLOC1S4Q9NUP1 217 aa14.04□□□□□ -0.16
CAPN9-201ENST00000271971 FRMPD4Q14CM0 1322 aa14.04□□□□□ -0.16
CAPN9-201ENST00000271971 POTEB3A0JP26 581 aa14.03□□□□□ -0.16
CAPN9-201ENST00000271971 CAVIN2O95810 425 aa14.03□□□□□ -0.16
CAPN9-201ENST00000271971 MYCLP12524 364 aaPredicted RBP14.03□□□□□ -0.16
CAPN9-201ENST00000271971 CCT6AP40227 531 aaKnown RBP14.03□□□□□ -0.16
CAPN9-201ENST00000271971 SNAPC2Q13487 334 aa14.03□□□□□ -0.16
CAPN9-201ENST00000271971 PGM5Q15124 567 aa14.03□□□□□ -0.16
CAPN9-201ENST00000271971 POTEBQ6S5H4 581 aa14.03□□□□□ -0.16
CAPN9-201ENST00000271971 ANKRD7Q92527 254 aa14.03□□□□□ -0.16
CAPN9-201ENST00000271971 FAM20AQ96MK3 541 aa14.03□□□□□ -0.16
CAPN9-201ENST00000271971 WDR11Q9BZH6 1224 aa14.03□□□□□ -0.16
CAPN9-201ENST00000271971 NAT10Q9H0A0 1025 aaKnown RBP14.03□□□□□ -0.16
CAPN9-201ENST00000271971 KBTBD4Q9NVX7 518 aa14.03□□□□□ -0.16
CAPN9-201ENST00000271971 BECN2A8MW95 431 aa14.03□□□□□ -0.16
CAPN9-201ENST00000271971 MEIS1O00470 390 aa14.03□□□□□ -0.16
CAPN9-201ENST00000271971 CHMP2AO43633 222 aa14.03□□□□□ -0.16
CAPN9-201ENST00000271971 TMEM119Q4V9L6 283 aa14.03□□□□□ -0.16
CAPN9-201ENST00000271971 LRCH2Q5VUJ6 765 aa14.03□□□□□ -0.16
CAPN9-201ENST00000271971 KIAA1524Q8TCG1 905 aa14.03□□□□□ -0.16
CAPN9-201ENST00000271971 ZNF830Q96NB3 372 aaPredicted RBP14.03□□□□□ -0.16
CAPN9-201ENST00000271971 MXRA8Q9BRK3 442 aa14.03□□□□□ -0.16
CAPN9-201ENST00000271971 PDCD2LQ9BRP1 358 aa14.03□□□□□ -0.16
CAPN9-201ENST00000271971 TXNRD2Q9NNW7 524 aa14.03□□□□□ -0.16
CAPN9-201ENST00000271971 CYP39A1Q9NYL5 469 aa14.03□□□□□ -0.16
CAPN9-201ENST00000271971 EML1O00423 815 aa14.02□□□□□ -0.16
CAPN9-201ENST00000271971 CTIFO43310 598 aaKnown RBP14.02□□□□□ -0.16
CAPN9-201ENST00000271971 MED24O75448 989 aa14.02□□□□□ -0.16
CAPN9-201ENST00000271971 CNMDO75829 334 aa14.02□□□□□ -0.16
CAPN9-201ENST00000271971 MCM6Q14566 821 aa14.02□□□□□ -0.16
CAPN9-201ENST00000271971 SYCP1Q15431 976 aa14.02□□□□□ -0.16
CAPN9-201ENST00000271971 ARHGEF16Q5VV41 709 aa14.02□□□□□ -0.16
CAPN9-201ENST00000271971 PCNX4Q63HM2 1172 aa14.02□□□□□ -0.16
CAPN9-201ENST00000271971 FASTKD5Q7L8L6 764 aaKnown RBP14.02□□□□□ -0.16
CAPN9-201ENST00000271971 ZNF577Q9BSK1 485 aa14.02□□□□□ -0.16
CAPN9-201ENST00000271971 SPATC1LQ9H0A9 340 aa14.02□□□□□ -0.16
CAPN9-201ENST00000271971 MAP3K20Q9NYL2 800 aaKnown RBP14.02□□□□□ -0.16
CAPN9-201ENST00000271971 POTEFA5A3E0 1075 aa14.02□□□□□ -0.17
CAPN9-201ENST00000271971 GOLGA6L19H0YKK7 550 aa14.02□□□□□ -0.17
CAPN9-201ENST00000271971 DDX39AO00148 427 aaKnown RBP14.02□□□□□ -0.17
CAPN9-201ENST00000271971 RPN1P04843 607 aaKnown RBP14.02□□□□□ -0.17
CAPN9-201ENST00000271971 CYP2C8P10632 490 aa14.02□□□□□ -0.17
CAPN9-201ENST00000271971 SETQ01105 290 aaPredicted RBP14.02□□□□□ -0.17
CAPN9-201ENST00000271971 CYP4A11Q02928 519 aa14.02□□□□□ -0.17
CAPN9-201ENST00000271971 CST9Q5W186 159 aa14.02□□□□□ -0.17
CAPN9-201ENST00000271971 POTEGQ6S5H5 508 aa14.02□□□□□ -0.17
CAPN9-201ENST00000271971 C17orf53Q8N3J3 647 aaPredicted RBP14.02□□□□□ -0.17
CAPN9-201ENST00000271971 SLC5A5Q92911 643 aa14.02□□□□□ -0.17
CAPN9-201ENST00000271971 PSMD10O75832 226 aa14.01□□□□□ -0.17
CAPN9-201ENST00000271971 TKFCQ3LXA3 575 aa14.01□□□□□ -0.17
CAPN9-201ENST00000271971 NCAPG2Q86XI2 1143 aa14.01□□□□□ -0.17
CAPN9-201ENST00000271971 MB21D1Q8N884 522 aa14.01□□□□□ -0.17
CAPN9-201ENST00000271971 C2orf69Q8N8R5 385 aa14.01□□□□□ -0.17
CAPN9-201ENST00000271971 LARP4BQ92615 738 aaKnown RBP14.01□□□□□ -0.17
CAPN9-201ENST00000271971 GSDMAQ96QA5 445 aa14.01□□□□□ -0.17
CAPN9-201ENST00000271971 CUEDC2Q9H467 287 aa14.01□□□□□ -0.17
CAPN9-201ENST00000271971 KCNH7Q9NS40 1196 aa14.01□□□□□ -0.17
CAPN9-201ENST00000271971 KIAA1024Q9UPX6 916 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms